rna9036, rna9036 (mRNA) Nannochloropsis gaditana

Overview
Namerna9036
Unique Namerna9036
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2194
Alignment locationKK037251.1:165131..166361 -

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Properties
Property NameValue
Product60s acidic ribosomal protein
Orig transcript idgnl|cribi|Naga_100611g1.5798.mrna
Orig protein idgnl|cribi|Naga_100611g1.5798
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:165131..166361 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100611g1gene8762Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9036rna9036-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21668.1cds9006Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9036 ID=rna9036|Name=rna9036|organism=Nannochloropsis gaditana|type=mRNA|length=2194bp
CCTCCCTCCTTCCTTCCGCGCAATCCGTCCCTCCTTCCCGTCTCAGAGGG
ACGTAATTCTTCCCTCCCTCCCTCCCTGTCTCCCCTTCTCCCCCCCTACC
CAACAGGGCGATGCATCCAAAGTGTCCGGTACTCCTCTCCCCCCCCCGCG
GGAGGCGGGGTCATGCTTGGGACTGAGGAAGACGGCGCGGGGAAGACGAA
GGACAGCCTCCAGAAACGTCGCATCGGCCTTGGCCGGGAGAAAGGCTACC
TGGCCAACGATATCCCCGAGAGCGAACGGCAAACTTTCTACACGACACAC
GGGCGGGTGGTGCGGGATGGGGGTGGGGTGGAGGCGGACCTGAAAGTGGC
TGCACCGCAAGCGTCGGTCCTGGAAGTCTCCTTGCAACAACAGGGTGTGT
TTTTTGATTTTGCCAATGAGTGGTCCAGTAAACACACGTATACACCCGGG
GCGGGGGTTCAGGAAGGAAGGCCTTTGGTCACGGATGCCACGTACCAGGA
ATTCGTCGACTATGTGGGACGAAAGGAAAAAGAAGGAAGCGTCCGTTACG
ACGTGCTTTTTAACGGTGCCCTGGAACCGTTACGGACGGCGTTGGACGCG
ACCGAGTACAAAAAGGCGGGAAAGGGACTGGACGCCTTGAAAGCAGCGGT
GCGTGAGGAAGTGAGCCGAGAATTCAATACCCACAAAGCGCAGATCAAGG
AGGAAGTAGAGCAAGCCATCCTGGCCCGCTACCAACCGGAAAGCCTGCTG
CGACGCCTGGCGCTGGAGGGCGACCCTCAGGTGAAGGTGGCGGTGGAGGC
GGTGAAGGAGGGAGGGCGGGAGGGCAAGGGGAAGGAAGGTAGGTACTGGC
AGGTGTTACAGGGCCCGAGACGGGAGGGAGGGACGGGGCAGCAGGCGGTG
GGAGGGAAGGAGAGAGGGAGGGAGGACAACGGGAAAGGGAAAGTGGCTAG
GGGAGGGAAGGAGGGAGGGAGGGAGGAGAACGGGAGAGGGAAAGTGGCTT
GGTACGGAGGACGGGAGAAGGAGGGCGTTTCCAGAGAGGGAAGGGCCGGG
GCAGGGGGGGATACAGGGAAGGAAGAAAGGTCGGAGCCCGTAGCACCAAA
CGTGCCGGTGGATCGACCCGGGACGGTAACCCCCCCTCATTTCCGCCGGA
CCTCCGCCCCGCCCTCCTCCCCGGCCTCGCGCGTGCCGTCGGGGGTGGCG
CGGGCGTGGTCGTGAAGGAGGGAAGGAGGAAGGGAGGGAGGGAGGAAGGG
CTTCTGTACATAGAATTGAGGAATGGTAGCGTGATTGGAGGGAGACCCCC
ATTGAATCATAGCGATGTTTGATAGGGAGGAAAGGGTGGAAGAGGGGGGA
CGCAGGATCGCAGGAAGAGCTCAAGAGCAGATCAGGACACGAGGGAGTAC
AGGGAGGGAGGGAGGACGGCTTGGTCTGTACATGGATAAGGCAGGGAATG
GAGGGCGAGGGAGGGAGAGAGGGGCTGGGGGCAGAAGGCGGCAGATGTGG
CTGGTCGTGAGATATACAGAAGGAAAGGTGGATTGGCGCGTGTGGCAGCG
CATCATGCCGAAGGAGGTCACGCCCGGCCGGGACTCAAGTAAGAACGAAA
AGAGCAGACGAAAAAGAGCGCTGAGAGCCACCGTTTTGCCCGTCCCTGAC
AGCAGCATCTCTCGTCCCCGGGGGGGCAAGTCCTGACAGCCATGCTCGGC
CGGAATCTGAATGTTTTTTTCCTGACTTTTCCTTGGGAGCCTCCTCCCCG
TCCCTAACCAACACAGCACACCCCGGCGTCCGGACAACCCCTCCTCCCTT
GAATGGCGTCGCCTGCGCACAAAGGGCTCCTCCCTCTCCACGTGAGACCG
CGCCACTTCCTCGTCCCCTCGCTCAGGAACATGCCGGCTTGCGCATGGCT
TAGTACCTGGCGTGGATGGGATGGAGGTGCCACAATTGCCATGAGCCAAC
CATTCCTTCAAGGGGAAAGCGAACACAAGCCTCCCCTCCTCTTGAAGTCC
CTCCACGGCCAACCCCCCCTCTCTGCCAGACCCCCCCTCCTATCGCTCCC
GCGCCACGCCTCGACAAGGTCCCGCCCTTTCCCTTCCCACCCACCCCACC
CCCCATCACCTCCCCACGTCCCTCCCAGCCCCTGCCCGTGCTTACCCGTC
CCCGCCAAACATGTTCCCTGCTCCCAGGTCGGCTTCCTCCTCCT
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protein sequence of rna9036

>rna9036-protein ID=rna9036-protein|Name=rna9036|organism=Nannochloropsis gaditana|type=polypeptide|length=121bp
MSLAELSPAQKEEMVISLSALLLQDSGVDMSAENLDAVIKASGNTVAAYY
PALYASLIEKAGGKLDKFMGAPGAGGGGGGGAGAPAAAAAEGAAPEAKKE
KKEEEEEADLGAGNMFGGDGY
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mRNA from alignment at KK037251.1:165131..166361-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9036 ID=rna9036|Name=rna9036|organism=Nannochloropsis gaditana|type=mRNA|length=1231bp|location=Sequence derived from alignment at KK037251.1:165131..166361- (Nannochloropsis gaditana)
CGTCTCATACGCCCGCACATCACGGTAAAGATACACACAGGCTCAAGCAT
CATGTCTTTGGCTGAGCTCTCGCCCGCCCAGAAAGAGGAGATGGTGATCT
CCCTTTCTGCCCTCCTTCTCCAAGACTCCGGCGTAGACATGAGCGCCGAA
AATCTCGACGCAGTCATTAAGGTAATATTTTTTAACGTGTCAGACCAAGG
ATGTGGATCAGCGTGGTACAATCAACATGTGTTCATGGTATGCATTGCGC
GTGAGCGGCTGCGCTTTCTTTCGCTTCGCGGGGCACGAGGTGCCCCCCCC
TCGTTGTCGGATGGGGCAGTTTCCAGGCCGACATACGCTTACAATCTGCC
AGATTCTGTGTGTACGCTTTCCATTCGTGAAAGGGCGGGAAGGGCTTCAA
TTCTCAGTACAACTCCCTCACACTCAATGCCGGTTTTATCGCGCCAGGCT
TCTGGGAATACGGTTGCTGCTTACTACCCGGCGTTGTACGCCTCCTTGAT
CGAAAAGGCCGGTGGGAAGCTCGACAAATTCATGGGAGCTCCGGGGGCGG
GTGGTGGAGGTGGAGGAGGCGCCGGAGCCCCAGCGGCGGCGGCAGCGGAG
GGGGCGGCCCCAGAGGCGAAGAAGGAGAAGAAGGAGGAGGAGGAGGAAGC
CGACCTGGGAGCAGGGAACATGTTTGGCGGGGACGGGTAAGCACGGGCAG
GGGCTGGGAGGGACGTGGGGAGGTGATGGGGGGTGGGGTGGGTGGGAAGG
GAAAGGGCGGGACCTTGTCGAGGCGTGGCGCGGGAGCGATAGGAGGGGGG
GTCTGGCAGAGAGGGGGGGTTGGCCGTGGAGGGACTTCAAGAGGAGGGGA
GGCTTGTGTTCGCTTTCCCCTTGAAGGAATGGTTGGCTCATGGCAATTGT
GGCACCTCCATCCCATCCACGCCAGGTACTAAGCCATGCGCAAGCCGGCA
TGTTCCTGAGCGAGGGGACGAGGAAGTGGCGCGGTCTCACGTGGAGAGGG
AGGAGCCCTTTGTGCGCAGGCGACGCCATTCAAGGGAGGAGGGGTTGTCC
GGACGCCGGGGTGTGCTGTGTTGGTTAGGGACGGGGAGGAGGCTCCCAAG
GAAAAGTCAGGAAAAAAACATTCAGATTCCGGCCGAGCATGGCTGTCAGG
ACTTGCCCCCCCGGGGACGAGAGATGCTGCTGTCAGGGACGGGCAAAACG
GTGGCTCTCAGCGCTCTTTTTCGTCTGCTCT
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Coding sequence (CDS) from alignment at KK037251.1:165131..166361-

>rna9036 ID=rna9036|Name=rna9036|organism=Nannochloropsis gaditana|type=CDS|length=1098bp|location=Sequence derived from alignment at KK037251.1:165131..166361- (Nannochloropsis gaditana)
GTACTAAGCTTCTGGGAATACGGTTGCTGCTTACTACCCGGCGTTGTACG
CCTCCTTGATCGAAAAGGCCGGTGGGAAGCTCGACAAATTCATGGGAGCT
CCGGGGGCGGGTGGTGGAGGTGGAGGAGGCGCCGGAGCCCCAGCGGCGGC
GGCAGCGGAGGGGGCGGCCCCAGAGGCGAAGAAGGAGAAGAAGGAGGAGG
AGGAGGAAGCCGACCTGGGAGCAGGGAACATGTTTGGCGGGGACGGATGT
CTTTGGCTGAGCTCTCGCCCGCCCAGAAAGAGGAGATGGTGATCTCCCTT
TCTGCCCTCCTTCTCCAAGACTCCGGCGTAGACATGAGCGCCGAAAATCT
CGACGCAGTCATTAAGGTACTAAGCTTCTGGGAATACGGTTGCTGCTTAC
TACCCGGCGTTGTACGCCTCCTTGATCGAAAAGGCCGGTGGGAAGCTCGA
CAAATTCATGGGAGCTCCGGGGGCGGGTGGTGGAGGTGGAGGAGGCGCCG
GAGCCCCAGCGGCGGCGGCAGCGGAGGGGGCGGCCCCAGAGGCGAAGAAG
GAGAAGAAGGAGGAGGAGGAGGAAGCCGACCTGGGAGCAGGGAACATGTT
TGGCGGGGACGGATGTCTTTGGCTGAGCTCTCGCCCGCCCAGAAAGAGGA
GATGGTGATCTCCCTTTCTGCCCTCCTTCTCCAAGACTCCGGCGTAGACA
TGAGCGCCGAAAATCTCGACGCAGTCATTAAGGTACTAAGCTTCTGGGAA
TACGGTTGCTGCTTACTACCCGGCGTTGTACGCCTCCTTGATCGAAAAGG
CCGGTGGGAAGCTCGACAAATTCATGGGAGCTCCGGGGGCGGGTGGTGGA
GGTGGAGGAGGCGCCGGAGCCCCAGCGGCGGCGGCAGCGGAGGGGGCGGC
CCCAGAGGCGAAGAAGGAGAAGAAGGAGGAGGAGGAGGAAGCCGACCTGG
GAGCAGGGAACATGTTTGGCGGGGACGGATGTCTTTGGCTGAGCTCTCGC
CCGCCCAGAAAGAGGAGATGGTGATCTCCCTTTCTGCCCTCCTTCTCCAA
GACTCCGGCGTAGACATGAGCGCCGAAAATCTCGACGCAGTCATTAAG
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Synonyms
Publications