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Properties
| Property Name | Value |
|---|
| Product | Zinc finger FYVE-type protein |
| Orig transcript id | gnl|cribi|Naga_100667g2.8080.mrna |
| Orig protein id | gnl|cribi|Naga_100667g2.8080 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:152114..153541 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9029 ID=rna9029|Name=rna9029|organism=Nannochloropsis gaditana|type=mRNA|length=1548bp
CACTGGGTCGCTTCGATGCGTACTTCTATTGTATGCCTGGCGTTGTATGT
TCACTCGATGATAAGAATTTGGTCTCACTGGGCACTGGTGAAATTTTCCT
GTGGGAGTAGCGCTGTGTTCGGAACGGGAAGAATCGGAGAAAAGACGTTG
TGCCAATTGATCAAGAAATCCTTGTCCCAAATCTCATCATTCCATCCCAC
CACATTCCAACTTATCGGCATCTTTCTAGTCACACATGACGCTTGTCACG
GCATTGGAATTACTGTCCTCGGACCCGCAGTCTGCAGCACGGGGGCACCC
CACACGGCCGTCCGAGCCAGTGGAACATGCGACAAGCCCGCGCAAAAATG
ACCAAGCCGGATCTCTCACCACGCCACAGCATAGCAACGGGAGTCATGTT
ACGCCTCACTTGACGACCAACACCTCGAAATTCCCGTCATCCCAAGTGTC
TGGGGGGCGCGATGCGCAGGTTGGGTCTTCTAATAACATATGTCGGAATC
CCTTCGATAGGATATCGGCGTCAGCCGTTTCCGCCGCCTCGTCCTCTTTT
TCTTCCACAACCTCCTCCAATGCATCTTTTGCCTCGGCGCAGGCAACTTT
GCGAGAGGACGATATAAATGATTTGGCAATACGGCTCTCTGATAAATTTG
ATGGAAGGGAGATGAAGAATACGAGACAACATTTCGCATCCGATCGGCTC
CCCGTCACAAGGGTTCTGACCTTTACCAAGCCGCAGGCCCTGCGCCGACA
TCAGGGAGGAACGGAGGAGGAAGTGAAGGGAGCGAAAGAAGGGGAAGCAT
GTCATGTGCAGCGGCCACGGCACACTGCAGGGTCAGGGGAAAAGGAAGAA
GCCAGAGTCTGGAGGGATTTCGGAAGGGCGGATGACGCGAGGCCGGCGGT
GGAAAAAGCGCCGGAAGGCACTTCCCCGAGCTCCGATCCCACAGAGCATC
CCATGGGATCATTGAGAGGCCACACGACCGGCAACAGCACCACCAGCAGC
AGCAGCAGCAGCAGCAGCGGGAGGGGAGGAGTAGATTCCGGCTTGACCGA
GCCGTTTCGGGACAGGGAAGAGACAAGGCATACCCAGGCATCCTCAACGC
AAGAACTGCAGCAGGAACAGGACGAGGCATGGGCCGTGGACATCCTCCCG
GTCGCCTCGGGTCCGACGACGGGGGCCGATGTGATGGAAGAGGTACCCGC
CGCGTCGGCGGCGGCGTTGGAAGCCGCCACTCCGAGCGTCGTCAATCTTT
TTTCCGGCCCTGCCTCCGCCTTTCCCTTTGCTGCGGATAAATCGGAGCTG
TGCTCATCGACCACTGTCACCTTGATGACTAGTAGCGCGGAAGCCGAGCC
GGAGGGCGGGAAGGAGGGCGAGGGGGAGGTAGGGAGCATGGGCAGCATGG
GGAACGCGAGCAGGGACGGGCGGTGCCACGAGCCGTCCCTCGCCTCGTTC
AAGAGCCGAGAGTTCAGTGGCTCCAATATGGCGCGAAGCGTGAGGCGGAG
GGCGGTGCTGCGGGTAGGGGCCGGTGTGGCCCTGGTGGCAGTGGGCGC back to topprotein sequence of rna9029 >rna9029-protein ID=rna9029-protein|Name=rna9029|organism=Nannochloropsis gaditana|type=polypeptide|length=357bp
MTRSRYHHGGCRQQQHPQGHPGALLLGAALVGTAVSRYIRPPRQELLIVQ
PQHGNPAPTYIQNAGATYMYIERPNQHLRQIENASHLVPHGPPDWRLAWH
CDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRC
HGVVMACYRAGTPYSPSMLAMPAARDLTAANGSLGHGDRGFLQTSACSEV
PRGDIFSHGTSVTAEAVAHGPPLARAGLGHALRAIPTAPSRNAFAGAVSR
PAAGIGGPMRETVACTCVGERRCSDCRCLVFSLAAFSCIGIMLARHGSIL
YSQKRYSIFPARWPKRLSSLTCSMAIHMLSETNILQGGKSITTAWASHFL
EKCISFF back to topmRNA from alignment at KK037251.1:152114..153541- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9029 ID=rna9029|Name=rna9029|organism=Nannochloropsis gaditana|type=mRNA|length=1428bp|location=Sequence derived from alignment at KK037251.1:152114..153541- (Nannochloropsis gaditana)
ATGACCCGGTCACGCTATCATCACGGTGGTTGTCGACAACAACAACATCC
TCAAGGGCATCCAGGCGCCCTTCTTCTCGGAGCCGCGCTCGTGGGCACGG
CAGGTAACCTCTTTAGTCGGAGATAAGGGTCAGCTTCCTTCCATCTTGCC
TGCAAGCTTTCCCTCGTTGTACAGCCTGAACACATCAGTTGTCCAATCGT
TCATTCCGCAGAATATCTATTTATCAGGTTCCTTATCCTCTCTTTCTCTT
CTTCACCTTGCTAGTGAGCAGATACATCAGACCACCTAGGCAAGAACTCT
TGATAGTTCAGCCACAACATGGCAACCCTGCCCCCACCTATATCCAAAAT
GCCGGCGCGACTTACATGTATATTGAAAGACCGAACCAGCATTTGCGTCA
AATCGAGAATGCTTCGCATTTAGTACCCCACGGCCCACCAGACTGGCGGC
TAGCATGGCACTGTGATGTGTGTTTCGTCGCGTTCGGCCTCTTGACTCGG
CGACACCACTGTCGGAACTGTGGTCGCTCGCTGTGCAGTCGACATTCTGA
AAAACGCGTTCCCTTACCGCATTGGGGATACTTGAACTACGTCCGTGTCT
GTGACAGGTGCCACGGGGTTGTCATGGCCTGTTACCGTGCGGGGACGCCG
TACTCGCCTTCCATGTTGGCAATGCCAGCAGCCCGCGATTTGACTGCCGC
AAACGGATCTTTGGGTCACGGTGACAGAGGTTTTCTCCAAACGTCTGCGT
GCAGCGAGGTTCCCAGGGGCGACATCTTCTCGCACGGAACGAGCGTGACA
GCTGAGGCAGTGGCCCACGGGCCGCCGTTAGCGCGCGCGTACGCACTGTC
AGACTCCCTCGGGGCTTGACGTGGCTGAAACTCCAGTGGCTTGGGCCACG
CCTTGCGTGCGATACCAACCGCACCCTCAAGAAATGCCTTTGCAGGAGCA
GTGTCCCGACCGGCCGCGGGCATTGGAGGGCCTAGTAACGCCATCAGCAC
CCCCCCTCAGCGAAGATTACAGATGAGGATATGATTGCCGGTCGCGGACG
AGATTACGGGAGTAAACGATCGAGGCGGCGAAGTGAGGGAAACGGTTGCT
TGTACATGTGTGGGTGAGAGGCGGTGTAGTGACTGCAGGTGTCTCGTCTT
CAGCCTTGCCGCTTTTTCATGCATTGGCATCATGCTTGCCCGCCATGGGA
GCATATTGTACAGTCAAAAAGTACGTAATGTAAAAGGAGGCTCGCTATTA
TGTAGCAGTCTATAAGCGCTATTCTATTTTCCCCGCTCGTTGGCCTAAAC
GACTGTCATCATTGACATGCAGCATGGCCATCCACATGCTTTCTGAAACT
AACATTTTACAGGGAGGTAAAAGTATCACAACTGCATGGGCCTCGCATTT
TCTCGAAAAGTGCATTTCATTTTTTTAA back to topCoding sequence (CDS) from alignment at KK037251.1:152114..153541- >rna9029 ID=rna9029|Name=rna9029|organism=Nannochloropsis gaditana|type=CDS|length=5370bp|location=Sequence derived from alignment at KK037251.1:152114..153541- (Nannochloropsis gaditana)
CGCTATTCTATTTTCCCCGCTCGTTGGCCTAAACGACTGTCATCATTGAC
ATGCAGCATGGCCATCCACATGCTTTCTGAAACTAACATTTTACAGGGAG
GTAAAAGTATCACAACTGCATGGGCCTCGCATTTTCTCGAAAAGTGCATT
TCATTTTTTTAATGAGGGAAACGGTTGCTTGTACATGTGTGGGTGAGAGG
CGGTGTAGTGACTGCAGGTGTCTCGTCTTCAGCCTTGCCGCTTTTTCATG
CATTGGCATCATGCTTGCCCGCCATGGGAGCATATTGTACAGTCAAAAAT
GGCTTGGGCCACGCCTTGCGTGCGATACCAACCGCACCCTCAAGAAATGC
CTTTGCAGGAGCAGTGTCCCGACCGGCCGCGGGCATTGGAGGGCCTATGA
GCAGATACATCAGACCACCTAGGCAAGAACTCTTGATAGTTCAGCCACAA
CATGGCAACCCTGCCCCCACCTATATCCAAAATGCCGGCGCGACTTACAT
GTATATTGAAAGACCGAACCAGCATTTGCGTCAAATCGAGAATGCTTCGC
ATTTAGTACCCCACGGCCCACCAGACTGGCGGCTAGCATGGCACTGTGAT
GTGTGTTTCGTCGCGTTCGGCCTCTTGACTCGGCGACACCACTGTCGGAA
CTGTGGTCGCTCGCTGTGCAGTCGACATTCTGAAAAACGCGTTCCCTTAC
CGCATTGGGGATACTTGAACTACGTCCGTGTCTGTGACAGGTGCCACGGG
GTTGTCATGGCCTGTTACCGTGCGGGGACGCCGTACTCGCCTTCCATGTT
GGCAATGCCAGCAGCCCGCGATTTGACTGCCGCAAACGGATCTTTGGGTC
ACGGTGACAGAGGTTTTCTCCAAACGTCTGCGTGCAGCGAGGTTCCCAGG
GGCGACATCTTCTCGCACGGAACGAGCGTGACAGCTGAGGCAGTGGCCCA
CGGGCCGCCGTTAGCGCGCGCATGACCCGGTCACGCTATCATCACGGTGG
TTGTCGACAACAACAACATCCTCAAGGGCATCCAGGCGCCCTTCTTCTCG
GAGCCGCGCTCGTGGGCACGGCAGCGCTATTCTATTTTCCCCGCTCGTTG
GCCTAAACGACTGTCATCATTGACATGCAGCATGGCCATCCACATGCTTT
CTGAAACTAACATTTTACAGGGAGGTAAAAGTATCACAACTGCATGGGCC
TCGCATTTTCTCGAAAAGTGCATTTCATTTTTTTAATGAGGGAAACGGTT
GCTTGTACATGTGTGGGTGAGAGGCGGTGTAGTGACTGCAGGTGTCTCGT
CTTCAGCCTTGCCGCTTTTTCATGCATTGGCATCATGCTTGCCCGCCATG
GGAGCATATTGTACAGTCAAAAATGGCTTGGGCCACGCCTTGCGTGCGAT
ACCAACCGCACCCTCAAGAAATGCCTTTGCAGGAGCAGTGTCCCGACCGG
CCGCGGGCATTGGAGGGCCTATGAGCAGATACATCAGACCACCTAGGCAA
GAACTCTTGATAGTTCAGCCACAACATGGCAACCCTGCCCCCACCTATAT
CCAAAATGCCGGCGCGACTTACATGTATATTGAAAGACCGAACCAGCATT
TGCGTCAAATCGAGAATGCTTCGCATTTAGTACCCCACGGCCCACCAGAC
TGGCGGCTAGCATGGCACTGTGATGTGTGTTTCGTCGCGTTCGGCCTCTT
GACTCGGCGACACCACTGTCGGAACTGTGGTCGCTCGCTGTGCAGTCGAC
ATTCTGAAAAACGCGTTCCCTTACCGCATTGGGGATACTTGAACTACGTC
CGTGTCTGTGACAGGTGCCACGGGGTTGTCATGGCCTGTTACCGTGCGGG
GACGCCGTACTCGCCTTCCATGTTGGCAATGCCAGCAGCCCGCGATTTGA
CTGCCGCAAACGGATCTTTGGGTCACGGTGACAGAGGTTTTCTCCAAACG
TCTGCGTGCAGCGAGGTTCCCAGGGGCGACATCTTCTCGCACGGAACGAG
CGTGACAGCTGAGGCAGTGGCCCACGGGCCGCCGTTAGCGCGCGCATGAC
CCGGTCACGCTATCATCACGGTGGTTGTCGACAACAACAACATCCTCAAG
GGCATCCAGGCGCCCTTCTTCTCGGAGCCGCGCTCGTGGGCACGGCAGCG
CTATTCTATTTTCCCCGCTCGTTGGCCTAAACGACTGTCATCATTGACAT
GCAGCATGGCCATCCACATGCTTTCTGAAACTAACATTTTACAGGGAGGT
AAAAGTATCACAACTGCATGGGCCTCGCATTTTCTCGAAAAGTGCATTTC
ATTTTTTTAATGAGGGAAACGGTTGCTTGTACATGTGTGGGTGAGAGGCG
GTGTAGTGACTGCAGGTGTCTCGTCTTCAGCCTTGCCGCTTTTTCATGCA
TTGGCATCATGCTTGCCCGCCATGGGAGCATATTGTACAGTCAAAAATGG
CTTGGGCCACGCCTTGCGTGCGATACCAACCGCACCCTCAAGAAATGCCT
TTGCAGGAGCAGTGTCCCGACCGGCCGCGGGCATTGGAGGGCCTATGAGC
AGATACATCAGACCACCTAGGCAAGAACTCTTGATAGTTCAGCCACAACA
TGGCAACCCTGCCCCCACCTATATCCAAAATGCCGGCGCGACTTACATGT
ATATTGAAAGACCGAACCAGCATTTGCGTCAAATCGAGAATGCTTCGCAT
TTAGTACCCCACGGCCCACCAGACTGGCGGCTAGCATGGCACTGTGATGT
GTGTTTCGTCGCGTTCGGCCTCTTGACTCGGCGACACCACTGTCGGAACT
GTGGTCGCTCGCTGTGCAGTCGACATTCTGAAAAACGCGTTCCCTTACCG
CATTGGGGATACTTGAACTACGTCCGTGTCTGTGACAGGTGCCACGGGGT
TGTCATGGCCTGTTACCGTGCGGGGACGCCGTACTCGCCTTCCATGTTGG
CAATGCCAGCAGCCCGCGATTTGACTGCCGCAAACGGATCTTTGGGTCAC
GGTGACAGAGGTTTTCTCCAAACGTCTGCGTGCAGCGAGGTTCCCAGGGG
CGACATCTTCTCGCACGGAACGAGCGTGACAGCTGAGGCAGTGGCCCACG
GGCCGCCGTTAGCGCGCGCATGACCCGGTCACGCTATCATCACGGTGGTT
GTCGACAACAACAACATCCTCAAGGGCATCCAGGCGCCCTTCTTCTCGGA
GCCGCGCTCGTGGGCACGGCAGCGCTATTCTATTTTCCCCGCTCGTTGGC
CTAAACGACTGTCATCATTGACATGCAGCATGGCCATCCACATGCTTTCT
GAAACTAACATTTTACAGGGAGGTAAAAGTATCACAACTGCATGGGCCTC
GCATTTTCTCGAAAAGTGCATTTCATTTTTTTAATGAGGGAAACGGTTGC
TTGTACATGTGTGGGTGAGAGGCGGTGTAGTGACTGCAGGTGTCTCGTCT
TCAGCCTTGCCGCTTTTTCATGCATTGGCATCATGCTTGCCCGCCATGGG
AGCATATTGTACAGTCAAAAATGGCTTGGGCCACGCCTTGCGTGCGATAC
CAACCGCACCCTCAAGAAATGCCTTTGCAGGAGCAGTGTCCCGACCGGCC
GCGGGCATTGGAGGGCCTATGAGCAGATACATCAGACCACCTAGGCAAGA
ACTCTTGATAGTTCAGCCACAACATGGCAACCCTGCCCCCACCTATATCC
AAAATGCCGGCGCGACTTACATGTATATTGAAAGACCGAACCAGCATTTG
CGTCAAATCGAGAATGCTTCGCATTTAGTACCCCACGGCCCACCAGACTG
GCGGCTAGCATGGCACTGTGATGTGTGTTTCGTCGCGTTCGGCCTCTTGA
CTCGGCGACACCACTGTCGGAACTGTGGTCGCTCGCTGTGCAGTCGACAT
TCTGAAAAACGCGTTCCCTTACCGCATTGGGGATACTTGAACTACGTCCG
TGTCTGTGACAGGTGCCACGGGGTTGTCATGGCCTGTTACCGTGCGGGGA
CGCCGTACTCGCCTTCCATGTTGGCAATGCCAGCAGCCCGCGATTTGACT
GCCGCAAACGGATCTTTGGGTCACGGTGACAGAGGTTTTCTCCAAACGTC
TGCGTGCAGCGAGGTTCCCAGGGGCGACATCTTCTCGCACGGAACGAGCG
TGACAGCTGAGGCAGTGGCCCACGGGCCGCCGTTAGCGCGCGCATGACCC
GGTCACGCTATCATCACGGTGGTTGTCGACAACAACAACATCCTCAAGGG
CATCCAGGCGCCCTTCTTCTCGGAGCCGCGCTCGTGGGCACGGCAGCGCT
ATTCTATTTTCCCCGCTCGTTGGCCTAAACGACTGTCATCATTGACATGC
AGCATGGCCATCCACATGCTTTCTGAAACTAACATTTTACAGGGAGGTAA
AAGTATCACAACTGCATGGGCCTCGCATTTTCTCGAAAAGTGCATTTCAT
TTTTTTAATGAGGGAAACGGTTGCTTGTACATGTGTGGGTGAGAGGCGGT
GTAGTGACTGCAGGTGTCTCGTCTTCAGCCTTGCCGCTTTTTCATGCATT
GGCATCATGCTTGCCCGCCATGGGAGCATATTGTACAGTCAAAAATGGCT
TGGGCCACGCCTTGCGTGCGATACCAACCGCACCCTCAAGAAATGCCTTT
GCAGGAGCAGTGTCCCGACCGGCCGCGGGCATTGGAGGGCCTATGAGCAG
ATACATCAGACCACCTAGGCAAGAACTCTTGATAGTTCAGCCACAACATG
GCAACCCTGCCCCCACCTATATCCAAAATGCCGGCGCGACTTACATGTAT
ATTGAAAGACCGAACCAGCATTTGCGTCAAATCGAGAATGCTTCGCATTT
AGTACCCCACGGCCCACCAGACTGGCGGCTAGCATGGCACTGTGATGTGT
GTTTCGTCGCGTTCGGCCTCTTGACTCGGCGACACCACTGTCGGAACTGT
GGTCGCTCGCTGTGCAGTCGACATTCTGAAAAACGCGTTCCCTTACCGCA
TTGGGGATACTTGAACTACGTCCGTGTCTGTGACAGGTGCCACGGGGTTG
TCATGGCCTGTTACCGTGCGGGGACGCCGTACTCGCCTTCCATGTTGGCA
ATGCCAGCAGCCCGCGATTTGACTGCCGCAAACGGATCTTTGGGTCACGG
TGACAGAGGTTTTCTCCAAACGTCTGCGTGCAGCGAGGTTCCCAGGGGCG
ACATCTTCTCGCACGGAACGAGCGTGACAGCTGAGGCAGTGGCCCACGGG
CCGCCGTTAGCGCGCGCATGACCCGGTCACGCTATCATCACGGTGGTTGT
CGACAACAACAACATCCTCAAGGGCATCCAGGCGCCCTTCTTCTCGGAGC
CGCGCTCGTGGGCACGGCAG back to top
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