EWM21674.1, cds8999 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|585101944|gb|EWM21674.1| (Zinc finger FYVE-type protein [Nannochloropsis gaditana]) HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
Query: 1 MTRSRYHHGGCRQQQHPQGHPGALLLGAALVGTAVSRYIRPPRQELLIVQPQHGNPAPTYIQNAGATYMYIERPNQHLRQIENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRCHGVVMACYRAGTPYSPSMLAMPAARDLTAANGSLGHGDRGFLQTSACSEVPRGDIFSHGTSVTAEAVAHGPPLARAGLGHALRAIPTAPSRNAFAGAVSRPAAGIGGPMRETVACTCVGERRCSDCRCLVFSLAAFSCIGIMLARHGSILYSQKRYSIFPARWPKRLSSLTCSMAIHMLSETNILQGGKSITTAWASHFLEKCISFF 357
MTRSRYHHGGCRQQQHPQGHPGALLLGAALVGTAVSRYIRPPRQELLIVQPQHGNPAPTYIQNAGATYMYIERPNQHLRQIENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRCHGVVMACYRAGTPYSPSMLAMPAARDLTAANGSLGHGDRGFLQTSACSEVPRGDIFSHGTSVTAEAVAHGPPLARAGLGHALRAIPTAPSRNAFAGAVSRPAAGIGGPMRETVACTCVGERRCSDCRCLVFSLAAFSCIGIMLARHGSILYSQKRYSIFPARWPKRLSSLTCSMAIHMLSETNILQGGKSITTAWASHFLEKCISFF
Sbjct: 1 MTRSRYHHGGCRQQQHPQGHPGALLLGAALVGTAVSRYIRPPRQELLIVQPQHGNPAPTYIQNAGATYMYIERPNQHLRQIENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRCHGVVMACYRAGTPYSPSMLAMPAARDLTAANGSLGHGDRGFLQTSACSEVPRGDIFSHGTSVTAEAVAHGPPLARAGLGHALRAIPTAPSRNAFAGAVSRPAAGIGGPMRETVACTCVGERRCSDCRCLVFSLAAFSCIGIMLARHGSILYSQKRYSIFPARWPKRLSSLTCSMAIHMLSETNILQGGKSITTAWASHFLEKCISFF 357
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|1026980278|ref|XP_016609092.1| (hypothetical protein SPPG_04145 [Spizellomyces punctatus DAOM BR117] >gi|907095388|gb|KND01053.1| hypothetical protein SPPG_04145 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 82.8037 bits (203), Expect = 1.331e-13 Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = 0
Query: 61 IQNAGATYMYIERPNQHLRQIENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRCHGVVMACYRAGTPYSPSMLAMPAARDLTAA 180
++ G T+ +ER IE + P+W + C C F R+HHCRNCG++ C + S K + LPH G + VRVCD CH + + GTP+ P ++P RD AA
Sbjct: 140 LKQDGVTFPPVERAESSAAMIETTTA------PEWTDSDVCMRCRTQFTTFNRKHHCRNCGQTFCGQCSAKTLALPHLGIVQEVRVCDTCHVKLTSKSPPGTPHQPRASSLPMPRDNDAA 253
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|635363122|emb|CCI48299.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 80.1073 bits (196), Expect = 5.863e-13 Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = 0
Query: 59 TYIQNAGATYMYIERPNQHLRQIENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRCHG 152
++IQ+ +++ + +Q Q + PP W+ + C+VC +F ++ RRHHCRNCG S+CS+HS R+PLP + + +R+CD C+G
Sbjct: 315 SHIQSKIQSHLIEDDEDQDATQSIVQRRYNQNFPPRWKQSRRCNVCNYSFSIMRRRHHCRNCGHSVCSQHSNHRLPLPKFNLMQPLRLCDTCYG 408
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|1139699231|gb|ONH66812.1| (Vacuolar protein sorting-associated protein 27 [Cyberlindnera fabianii]) HSP 1 Score: 79.7221 bits (195), Expect = 1.145e-12 Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 0
Query: 91 GPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRCHGVV 154
PP+W + C +C AF +L R+HHCRNCG C HS K +PLP G VRVCD C+ V
Sbjct: 164 APPEWEDSDACMICSTAFSMLNRKHHCRNCGGVFCQAHSSKSIPLPELGITEPVRVCDTCYDEV 227
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|663444121|emb|CDR38995.1| (CYFA0S02e10264g1_1 [Cyberlindnera fabianii]) HSP 1 Score: 79.7221 bits (195), Expect = 1.155e-12 Identity = 31/64 (48.44%), Postives = 38/64 (59.38%), Query Frame = 0
Query: 91 GPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRCHGVV 154
PP+W + C +C AF +L R+HHCRNCG C HS K +PLP G VRVCD C+ V
Sbjct: 164 APPEWEDSDACMICSTAFSMLNRKHHCRNCGGVFCQAHSSKSIPLPELGITEPVRVCDTCYDEV 227
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|954280782|gb|KRX72191.1| (Hepatocyte growth factor-regulated tyrosine kinase substrate, partial [Trichinella sp. T6]) HSP 1 Score: 79.7221 bits (195), Expect = 1.596e-12 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0
Query: 82 ENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRC 150
E+ + + PDW A HC C V F L+TR+HHCRNCG+ C + S K +PLPH G VRVC+ C
Sbjct: 1663 ESDAMFMAESAPDWVDADHCFRCKVQFSLITRKHHCRNCGQIFCDKCSNKNIPLPHLGIERDVRVCEGC 1731
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|954280781|gb|KRX72190.1| (Hepatocyte growth factor-regulated tyrosine kinase substrate, partial [Trichinella sp. T6]) HSP 1 Score: 79.7221 bits (195), Expect = 1.610e-12 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0
Query: 82 ENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRC 150
E+ + + PDW A HC C V F L+TR+HHCRNCG+ C + S K +PLPH G VRVC+ C
Sbjct: 1663 ESDAMFMAESAPDWVDADHCFRCKVQFSLITRKHHCRNCGQIFCDKCSNKNIPLPHLGIERDVRVCEGC 1731
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|954280779|gb|KRX72188.1| (Hepatocyte growth factor-regulated tyrosine kinase substrate, partial [Trichinella sp. T6]) HSP 1 Score: 79.7221 bits (195), Expect = 1.611e-12 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0
Query: 82 ENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRC 150
E+ + + PDW A HC C V F L+TR+HHCRNCG+ C + S K +PLPH G VRVC+ C
Sbjct: 1663 ESDAMFMAESAPDWVDADHCFRCKVQFSLITRKHHCRNCGQIFCDKCSNKNIPLPHLGIERDVRVCEGC 1731
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|954280778|gb|KRX72187.1| (Hepatocyte growth factor-regulated tyrosine kinase substrate, partial [Trichinella sp. T6]) HSP 1 Score: 79.7221 bits (195), Expect = 1.796e-12 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0
Query: 82 ENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRC 150
E+ + + PDW A HC C V F L+TR+HHCRNCG+ C + S K +PLPH G VRVC+ C
Sbjct: 1653 ESDAMFMAESAPDWVDADHCFRCKVQFSLITRKHHCRNCGQIFCDKCSNKNIPLPHLGIERDVRVCEGC 1721
BLAST of EWM21674.1 vs. NCBI_GenBank
Match: gi|954532842|gb|KRZ57318.1| (Hepatocyte growth factor-regulated tyrosine kinase substrate [Trichinella nativa]) HSP 1 Score: 79.7221 bits (195), Expect = 1.811e-12 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0
Query: 82 ENASHLVPHGPPDWRLAWHCDVCFVAFGLLTRRHHCRNCGRSLCSRHSEKRVPLPHWGYLNYVRVCDRC 150
E+ + + PDW A HC C V F L+TR+HHCRNCG+ C + S K +PLPH G VRVC+ C
Sbjct: 1485 ESDAMFMAESAPDWVDADHCFRCKVQFSLITRKHHCRNCGQIFCDKCSNKNIPLPHLGIERDVRVCEGC 1553 The following BLAST results are available for this feature:
BLAST of EWM21674.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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