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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100412g4.3339.mrna |
| Orig protein id | gnl|cribi|Naga_100412g4.3339 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:142600..144049 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9025 ID=rna9025|Name=rna9025|organism=Nannochloropsis gaditana|type=mRNA|length=2574bp
CAAACTCGTTCTAGACTCATATTTCTAACATCGCCACCTTTTCTCACTCG
TGTCGTGGTAGGTTGTACGGCGAAGTGGACTGACGAGAGGGTGCTCGGGC
TCACATCGAGATTGCGCAGGCTGGAAGTTACGTACGGGCTATAACCTGGT
CCTCCGTCTCGAGTCAAAAGAAGGATAAAGGTCCCTTGGAAGGCACGTCC
GTTCAAGAGACGTCGGCCCTTGAATCGGTGACCGACGGCAGAGAGGACTG
CGCGCGGGCAGGATGGACTTCAATCAATACATGCACCACCATGCGCAGCA
GCATCCGCTCCATCACGAGGAGGGCCCCGGGACGTTCTCGCAAGCACAAT
ACCACCACCAAAGCCAGCACATGTCAGGAGACGGCAGCATGGGCAAGGTG
GGCTCGGACTCCCAAAGCAATGGGCCACATCCGAATGCAAGCCAGTTCCC
ACGGACACCCTTTCCTGCGTTTCCTCCTGGTTTGAACGGGGCGGGGTCAC
CCATTCCCTTCTTACATGCACCGACGCCTCCCCCCCTCCTTCCCGTAGCG
CCACCGGTTCCAAACCAAGCCGGGTCGGGGGGAGGAACGGGCCCTCCACC
CTCCTCCGGGGCGCCGCCTCCTCCCCTCCCTGCCCTCACCGCCGACGCCT
TTGCTGCTATGACGCAAGGGTTGGATGTGTCGAATCTACAGGCCCAGGCC
GCCGCCTACTATCAATTCATGGCAAACAGTGGGATGCCGCTACCGCCCTT
CGTCTTCCCCTCGGGGCAGGAAGGAGGGGGGGTCATGATGGCTCCCGGCT
TTCCGGGCGGGGGGGAGGCGGGTTCGGAGGGAGGGAAAGGGGAGGGGGGG
GGGAAGGGGGGGAGTTGGGGCAGCCAAGGCGAAGAGAGGGCGGGGGAGGC
ACGGGGAGGAAAGAGCAAGGCAAGAAAATGGTCCGAAAGTGGTCGGCGGA
GGAGGACGCGGAGATGGTCCGGTTGGTGAAGGAGCTGGGCACGAAGCAAT
GGGGTCAGATTGGGATTCAATTGGGCGGGCGGAGTGGGAAACAATGCCGG
GAACGTTGGCACAACCAGCTCGATCCGAACATCAAAAAGGAGGCCTGGAG
TGCGGAGGAGGAGATGGTGCTCCAGCAGAAGCATGCGGAGTACGGGAACC
GGTGGGCGGAAATTGCGCGCTTTCTCCCGGGGCGGACGGACAATGCGATC
AAGAATCATTGGAACAATGCCCGTCGTCGCATGAGCATGGGGAAAAGTTT
TTCGAGCCGGGGGCATGACGAGCCCTACGGCGGGAGCCGTCGAGGCAGCA
AAATTGAAAGCGGCAACTCCCTCTCCATGGATGGTGCCGGCCAGAGCAGC
GACCCGCCCTCCCTCCCGCCCTCCTTCCCGCCCTCCCTCCCTCCCCACCC
CTCGACGGGCATCTCCCCTCCTCCCATGCCACCCCCTCCCACCTCCATCA
GCGCGACCGAGACCCTCCCTCTCTCCCCCCGGACCTCCATCCCGCCCTCC
CTCGGTCCCTCCGACAGTGCCGCGACCCTTCTGCCCGCCCATTTCCTCCC
TCATCCCCTGACTACCTCCGAACACACCGAGTCCCGTCCCTCCCCGGTTG
AAGCTACCTTAACTAATTCTCCTTCCTCGTCCCTTCTGCCTGTCTCGCAG
CAGGCGAAGGAGTGTGAGGGGAAGGGCCAAGGGGGCGTCCTGGGGGTGGA
GGCAGGGGGGCGGGTGGAGGGAGGGAGGCAGGACGGGAAGGAGGGAGGGC
CGGACGAGGCCAAGATCCTTCTCTCCTTGAGCTGCGGCCCCAGCCGGGGG
AAGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGGGGGTGTCGGACTA
CGGGGTGGGAAGCCCGGGGGGGCAACGGAAACGGGGGCGGGCGGGTAGAG
GCCAGAGTGGGGAGAGATTGGTCTCCTCGGTGATGGAGGAGGATACCGCC
TCCTCCCCGGTACCCTCGCAAGGGGGAGGGCACAGCAGCAATAGCAGCCT
GGGTCAGGAGAGTCAAGGGGAAGGGATGGAGGGAGGGGAGAAACAGGAGA
TGATGCGGACGTTGGCGGGCTCGCCGGAGGGGGCCGAAGCGAGGGAGGAA
GTGCTGGGAGTTTGAAGGGGGGGAGGCAGGTAGGAGGGATCGTGGCGCAC
GCGCAGAGTCTGCTTGATATACTTCCCACGTCCACGGGTATGCGCGAAGG
AAAGGAAGCGGCTTTTTCCCCTTGTTCCAGAGTCCCGCCCTCCGACTCTT
TCTTCCCCCTTCTCGAAGTAAAGTTCAGGCCCCAAGGACGGGAAGGAGGG
CGGGAAGCGGGGAGAGGGGAGGCTTGCCCTCAAGACAGCCTCGGGCATGG
TGACATGAAAGCATCCCTCGCAGGAACTAATACTTCGTATCAATCGGGTG
ACTTTGTGCATTGATAAATGGAAAAGAACACGAGGGGAGGCGGGAGGAAA
TACGGAAGAGGGGGGCTGGCTTGGGAGGAGGTCAAGACGTACTCAATACA
ACTAAATTGCCCAAGGGAGCAAGGGACCATGGAGATGGGCCCGAAAAGCA
TGCAAATAACATGGGAGCGATGCA back to topprotein sequence of rna9025 >rna9025-protein ID=rna9025-protein|Name=rna9025|organism=Nannochloropsis gaditana|type=polypeptide|length=453bp
MPTRKGKKKNKHDDCQVPSPPMAPATSKHQGDRNVQQDDPAHSLLHTNKT
LLRPHMPRLSHAPQGGLLPDPAPYLKSPYPPPPSPPHPPPYLNHASLRRN
PRGARGRSGRGLRLPLHEPHADASVSSSSSVPPSRHPLHSPVRSIGKKRP
RHDTSTALPHLSLSSPITSSSAAAPSPHGPHRRHSFPTSPPFQTHHRQFH
ASAPPPSRPASVPRQRQAKPPSRGAPQAGKPTGPPLLNVYLSPQEGTEGA
GEGGVEGVELGFNYWVHERTKVLGADVARTILCVLPPRLRHPTDAAAPAL
PPSLPPPLPPFLRPGTLADARRVVVVNVTGLSPSDAVRDLHPSLAPFLTS
LSSVPIRYTATHDANPRPDHLLSAAASLLWLPPSLPPSLPPSLPPAFPRG
GGSARCCRSTRSFWREGGREGGRKGGREGAGCSDRARRRRWRRFPRAKRA
RWR back to topmRNA from alignment at KK037251.1:142600..144049+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9025 ID=rna9025|Name=rna9025|organism=Nannochloropsis gaditana|type=mRNA|length=1450bp|location=Sequence derived from alignment at KK037251.1:142600..144049+ (Nannochloropsis gaditana)
gcggggacggtggTGATGTGTGTTTTGAAACATGGGGTTCTCGATGATTG
ACAAATTGCACCGCCTTGACTGCTATTAACAGGTCATCGCGATGCCCaca
agaaaagggaaaaaaaaaaacaaacaCGATGATTGCCAAGTTCCATCACC
TCCCATGGCTCCAGCCACTTCCAAGCACCAAGGGGACCGCAACGTCCAAC
AAGATGACCCAGCCCACTCACTATTACACACAAATAAAACACTTTTGCGC
CCTCACATGCCACGTTTAAGCCATGCCCCGCAGGGCGGGCTACTTCCTGA
CCCGGCCCCCTACCTGAAGTCTCCttacccccctcctccatctccaccgc
atcctcccccgTACCTAAACCACGCATCGCTGCGACGCAATCCGAGGGGG
GCGCGCGGCAGAAGCGGTCGAGGCTTGAGACTTCCTCTCCACGAGCCGCA
CGCCGACgcctctgtctcttcctcttcttcagtGCCACCCTCCCGGCACC
CTCTCCACAGTCCAGTCCGTTCAATCGGCAAGAAACGCCCAAGACACGAT
ACGTCAActgccctcccccatctctcATTATCTTCCCCTATCACCTCCAg
ttccgccgccgccccttCTCCACACGGGCCCCACCGACgccattccttcc
ctacctccccccccttccaaacACATCACCGCCAATTTCACGCCTccgcc
ccacctccttcccgtcccgcAAGCGTTCCACGTCAGCGACAAGCAAAGCC
CCCGTCGAGAGGCGCTCCTCAGGCAGGGAAACCGACCGGACCGCCGCTGT
TAAACGTGTATCTCTCCCcgcaggaagggacggaaggcgcgggggagggc
ggggtcgagggcgtGGAGCTGGGCTTCAATTATTGGGTGCATGAGCGTAC
CAAAGTCCTGGGAGCGGACGTGGCAAGGACCATCCTCTgcgttctccccc
ctcgactTCGCCATCCAACCGATGCGGCGGcgccagccctccctccctcc
ctccctccccccctccctcccttcctccgacccGGGACCCTGGCCGATGC
GCGCCGGGTGGTCGTGGTGAATGTTACTGGCCTCTCACCTTCGGACGCGG
TCCGGgacctccacccctccctcgcccccttcctcacctcgctctcctcc
gtGCCGATCCGATACACGGCTACGCACGACGCCAACCCCCGACCCGACCA
TTTGCTGTCCGCGGCGGCGTCCTTGCTAtggctcccgccctccctcccgc
cctccctcccgccctcccttccgcctgccttccctcgGGGCGGGGGCTCG
GCGCGGTGTTGCAGGAGCACGAGGTCgttttggagggagggagggaggga
gggagggaggaagggagggagggaaggcgctGGGTGCTCCGACCGCGCGC
gtcggaggagatggaggcggttTCCACGAGCGAAGAGAGCGAGGTGGAGG
back to topCoding sequence (CDS) from alignment at KK037251.1:142600..144049+ >rna9025 ID=rna9025|Name=rna9025|organism=Nannochloropsis gaditana|type=CDS|length=1359bp|location=Sequence derived from alignment at KK037251.1:142600..144049+ (Nannochloropsis gaditana)
ATGCCCacaagaaaagggaaaaaaaaaaacaaacaCGATGATTGCCAAGT
TCCATCACCTCCCATGGCTCCAGCCACTTCCAAGCACCAAGGGGACCGCA
ACGTCCAACAAGATGACCCAGCCCACTCACTATTACACACAAATAAAACA
CTTTTGCGCCCTCACATGCCACGTTTAAGCCATGCCCCGCAGGGCGGGCT
ACTTCCTGACCCGGCCCCCTACCTGAAGTCTCCttacccccctcctccat
ctccaccgcatcctcccccgTACCTAAACCACGCATCGCTGCGACGCAAT
CCGAGGGGGGCGCGCGGCAGAAGCGGTCGAGGCTTGAGACTTCCTCTCCA
CGAGCCGCACGCCGACgcctctgtctcttcctcttcttcagtGCCACCCT
CCCGGCACCCTCTCCACAGTCCAGTCCGTTCAATCGGCAAGAAACGCCCA
AGACACGATACGTCAActgccctcccccatctctcATTATCTTCCCCTAT
CACCTCCAgttccgccgccgccccttCTCCACACGGGCCCCACCGACgcc
attccttccctacctccccccccttccaaacACATCACCGCCAATTTCAC
GCCTccgccccacctccttcccgtcccgcAAGCGTTCCACGTCAGCGACA
AGCAAAGCCCCCGTCGAGAGGCGCTCCTCAGGCAGGGAAACCGACCGGAC
CGCCGCTGTTAAACGTGTATCTCTCCCcgcaggaagggacggaaggcgcg
ggggagggcggggtcgagggcgtGGAGCTGGGCTTCAATTATTGGGTGCA
TGAGCGTACCAAAGTCCTGGGAGCGGACGTGGCAAGGACCATCCTCTgcg
ttctcccccctcgactTCGCCATCCAACCGATGCGGCGGcgccagccctc
cctccctccctccctccccccctccctcccttcctccgacccGGGACCCT
GGCCGATGCGCGCCGGGTGGTCGTGGTGAATGTTACTGGCCTCTCACCTT
CGGACGCGGTCCGGgacctccacccctccctcgcccccttcctcacctcg
ctctcctccgtGCCGATCCGATACACGGCTACGCACGACGCCAACCCCCG
ACCCGACCATTTGCTGTCCGCGGCGGCGTCCTTGCTAtggctcccgccct
ccctcccgccctccctcccgccctcccttccgcctgccttccctcgGGGC
GGGGGCTCGGCGCGGTGTTGCAGGAGCACGAGGTCgttttggagggaggg
agggagggagggagggaggaagggagggagggaaggcgctGGGTGCTCCG
ACCGCGCGCgtcggaggagatggaggcggttTCCACGAGCGAAGAGAGCG
AGGTGGAGG back to top
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