EWM21679.1, cds8995 (CDS) Nannochloropsis gaditana

Overview
NameEWM21679.1
Unique Namecds8995
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:142691..144049 +

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Properties
Property NameValue
Protein idEWM21679.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100412g4.3339.mrna
GbkeyCDS
End range.
End range144049
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:142691..144049 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21679.1 vs. NCBI_GenBank
Match: gi|585101953|gb|EWM21679.1| (hypothetical protein Naga_100412g4, partial [Nannochloropsis gaditana])

HSP 1 Score: 879.011 bits (2270), Expect = 0.000e+0
Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0 
Query:    1 MPTRKGKKKNKHDDCQVPSPPMAPATSKHQGDRNVQQDDPAHSLLHTNKTLLRPHMPRLSHAPQGGLLPDPAPYLKSPYPPPPSPPHPPPYLNHASLRRNPRGARGRSGRGLRLPLHEPHADASVSSSSSVPPSRHPLHSPVRSIGKKRPRHDTSTALPHLSLSSPITSSSAAAPSPHGPHRRHSFPTSPPFQTHHRQFHASAPPPSRPASVPRQRQAKPPSRGAPQAGKPTGPPLLNVYLSPQEGTEGAGEGGVEGVELGFNYWVHERTKVLGADVARTILCVLPPRLRHPTDAAAPALPPSLPPPLPPFLRPGTLADARRVVVVNVTGLSPSDAVRDLHPSLAPFLTSLSSVPIRYTATHDANPRPDHLLSAAASLLWLPPSLPPSLPPSLPPAFPRGGGSARCCRSTRSFWREGGREGGRKGGREGAGCSDRARRRRWRRFPRAKRARWR 453
            MPTRKGKKKNKHDDCQVPSPPMAPATSKHQGDRNVQQDDPAHSLLHTNKTLLRPHMPRLSHAPQGGLLPDPAPYLKSPYPPPPSPPHPPPYLNHASLRRNPRGARGRSGRGLRLPLHEPHADASVSSSSSVPPSRHPLHSPVRSIGKKRPRHDTSTALPHLSLSSPITSSSAAAPSPHGPHRRHSFPTSPPFQTHHRQFHASAPPPSRPASVPRQRQAKPPSRGAPQAGKPTGPPLLNVYLSPQEGTEGAGEGGVEGVELGFNYWVHERTKVLGADVARTILCVLPPRLRHPTDAAAPALPPSLPPPLPPFLRPGTLADARRVVVVNVTGLSPSDAVRDLHPSLAPFLTSLSSVPIRYTATHDANPRPDHLLSAAASLLWLPPSLPPSLPPSLPPAFPRGGGSARCCRSTRSFWREGGREGGRKGGREGAGCSDRARRRRWRRFPRAKRARWR
Sbjct:    1 MPTRKGKKKNKHDDCQVPSPPMAPATSKHQGDRNVQQDDPAHSLLHTNKTLLRPHMPRLSHAPQGGLLPDPAPYLKSPYPPPPSPPHPPPYLNHASLRRNPRGARGRSGRGLRLPLHEPHADASVSSSSSVPPSRHPLHSPVRSIGKKRPRHDTSTALPHLSLSSPITSSSAAAPSPHGPHRRHSFPTSPPFQTHHRQFHASAPPPSRPASVPRQRQAKPPSRGAPQAGKPTGPPLLNVYLSPQEGTEGAGEGGVEGVELGFNYWVHERTKVLGADVARTILCVLPPRLRHPTDAAAPALPPSLPPPLPPFLRPGTLADARRVVVVNVTGLSPSDAVRDLHPSLAPFLTSLSSVPIRYTATHDANPRPDHLLSAAASLLWLPPSLPPSLPPSLPPAFPRGGGSARCCRSTRSFWREGGREGGRKGGREGAGCSDRARRRRWRRFPRAKRARWR 453
The following BLAST results are available for this feature:
BLAST of EWM21679.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101953|gb|EWM21679.1|0.000e+0100.00hypothetical protein Naga_100412g4, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9025rna9025Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications