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Properties
| Property Name | Value |
|---|
| Product | myb transcription factor |
| Orig transcript id | gnl|cribi|Naga_100412g2.3340.mrna |
| Orig protein id | gnl|cribi|Naga_100412g2.3340 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:138770..141819 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9024 ID=rna9024|Name=rna9024|organism=Nannochloropsis gaditana|type=mRNA|length=1208bp
GCCAGGTCATAACTGGACCAGATCGGGCAGTCAGTCCATGCCTTATATAT
AGGGTAGCATCAACATGCCCCACTTGGTGGACAGCGAGGACGAGCAGCGC
GCTATACGTTAAGCCTTGATACGAAACCATCACCGTATCTGGGGCTGCTG
ACGATTTCTCAGGGTTGAATGAAAAAGCTATGGCTTTATTTAAGGCTGAT
ATATCAGAAGACCAATTGATATCGCACCGAAAGCATCCACCACAGCTGCC
TCCTACCCCGGCAACGACAAGTGTTCTGCAAGCCTCTCCTAAGCCTCCAT
TCCACTCCTTCTGGGCCCTCCGCGCTTTTCTATGCTGCTCAATTACCTGG
TCGGCAGTCATGACAGGTTGCCTCGGTCCTTTTTTCCCGCTCTACATGAA
GGAGAACTTCCAAGCCACCACAACCTTGGTGGGTTTCATATTCTCCGTCA
CCTCCCTTGTCCAATTTCTGACCTGCCCCCTGGTGGCCCATATCTCCCAT
CGAATCACTCGCCTGGGAAGCTTGCGCCTCGCCATCCTCATTTTGATCGG
AGGAGGATTCATTTTCGGACTTTCGCACCATGCTGCGGGTTTCCTCGCGG
GTCGGCTCTTGCAAGGAATGGGCAACGGCGTGCTGGAAGTGGCCGGTCTC
AGCCTCCTCATGCGTCATTCCCCGGACATTCGCCGGGACATCGGGCTTTT
GGAAGGGTCTTCGGCCCTCGGATTTCTGTTCGGACCGTTGCTGGGTGGTC
TAATCTTCCACTGGTGGGGTATCCGAACACTTTTCCTCCTCCTCACCGCC
CCCTTCCTCCTCTTCCTCTCCCTCCTGCTCCTCTGCCCTCATTGGATCGT
TCCCCGAACGTCGTCCTTCCGCATCCCGCCGCCGTCGAGCACACACGCCT
CCCCTGCGTACCCCACGGGTGCAGGGTGTAGGGAAGACGAGGCCTCAGAC
CTTCCTCCCCCTCGCTTGACCCCTGCCTCTTTCCTCCCTGGGATGCCAGA
TGACCAGGGCGGAGCACGTGCCTACTTGCACGCCTTATTTCAGGCCCTTG
GTCAGAATTTCCTCCTCCCTGTGTACATTGTCACCGTTCTTCTCGTCTCC
GGGGCCCTCGGTTTCTTTGACACGGCATTGGCGGAGCATTTGGGTGGGTG
TGAAGGGAAAGAAGGAGGGAGGGAGGGAGGGAGGGAGTGTAGTCGTGTCC
TAGGCTGA back to topprotein sequence of rna9024 >rna9024-protein ID=rna9024-protein|Name=rna9024|organism=Nannochloropsis gaditana|type=polypeptide|length=395bp
MVRKWSAEEDAEMVRLVKELGTKQWGQIGIQLGGRSGKQCRERWHNQLDP
NIKKEAWSAEEEMVLQQKHAEYGNRWAEIARFLPGRTDNAIKNHWNNARR
RMSMGKSFSSRGHDEPYGGSRRGSKIESGNSLSMDGAGQSSDPPSLPPSF
PPSLPPHPSTGISPPPMPPPPTSISATETLPLSPRTSIPPSLGPSDSAAT
LLPAHFLPHPLTTSEHTESRPSPVEATLTNSPSSSLLPVSQQAKECEGKG
QGGVLGVEAGGRVEGGRQDGKEGGPDEAKILLSLSCGPSRGKEEGREEGR
EEGGVSDYGVGSPGGQRKRGRAGRGQSGERLVSSVMEEDTASSPVPSQGG
GHSSNSSLGQESQGEGMEGGEKQEMMRTLAGSPEGAEAREEVLGV back to topmRNA from alignment at KK037251.1:138770..141819- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9024 ID=rna9024|Name=rna9024|organism=Nannochloropsis gaditana|type=mRNA|length=3050bp|location=Sequence derived from alignment at KK037251.1:138770..141819- (Nannochloropsis gaditana)
CAAACTCGTTCTAGACTCATATTTCTAACATCGCCACCTTTTCTCACTCG
TGTCGTGGTAGGTTGTACGGCGAAGTGGACTGACGAGAGGGTGCTCGGGC
TCACATCGAGATTGCGCAGGCTGGAAGTTACGTACGGGCTATAACCTGGT
CCTCCGTCTCGAGTCAAAAGAAGGATAAAGGTCCCTTGGAAGGCACGTCC
GTTCAAGAGACGTCGGCCCTTGAATCGGTGACCGACGGCAGAGAGGACTG
CGCGCGGGCAGGATGGACTTCAATCAATACATGCACCACCATGCGCAGCA
GCATCCGCTCCATCACGAGGAGGGCCCCGGGACGTTCTCGCAAGCACAAT
ACCACCACCAAAGCCAGCACATGTCAGGAGACGGCAGCATGGGCAAGGTG
GGCTCGGACTCCCAAAGCAATGGGCCACATCCGAATGCAAGCCAGTTCCC
ACGGACACCCTTTCCTGCGTTTCCTCCTGGTTTGAACGGGGCGGGGTCAC
CCATTCCCTTCTTACATGCACCGACGCCTCCCCCCCTCCTTCCCGTAGCG
CCACCGGTTCCAAACCAAGCCGGGTCGGGGGGAGGAACGGGCCCTCCACC
CTCCTCCGGGGCGCCGCCTCCTCCCCTCCCTGCCCTCACCGCCGACGCCT
TTGCTGCTATGACGCAAGGGTTGGATGTGTCGAATCTACAGGCCCAGGCC
GCCGCCTACTATCAATTCATGGCAAACAGTGGGATGCCGCTACCGCCCTT
CGTCTTCCCCTCGGGGCAGGAAGGAGGGGGGGTCATGATGGCTCCCGGCT
TTCCGGGCGGGGGGGAGGCGGGTTCGGAGGGAGGGAAAGGGGAGGGGGGG
GGGAAGGGGGGGAGTTGGGGCAGCCAAGGCGAAGAGAGGGCGGGGGAGGC
ACGGGGAGGAAAGAGCAAGGCAAGAAAATGGTCCGAAAGTGGTCGGCGGA
GGAGGACGCGGAGATGGTCCGGTTGGTGAAGGAGCTGGGCACGAAGCAAT
GGGGTCAGATTGGGATTCAATTGGGCGGGCGGAGTGGGAAACAATGCCGG
GAACGTTGGCACAACCAGCTCGATCCGAACATCAAAAAGGAGGCCTGGAG
TGCGGAGGAGGAGATGGTGCTCCAGCAGAAGCATGCGGAGTACGGGAACC
GGTGGGCGGAAATTGCGCGCTTTCTCCCGGGGCGGACGGACAATGCGATC
AAGGTAGGGAAGGAGGGAGGGAGGGGGTCTTTCTTTAAGGTGGAGACAGT
TTACGTGGGAGGGAAAGAGGGGAGGGCGAGTCCGCTCCAGAGAGATTGGC
AGTGCGACGATGGCTGGCGCGTACGGACGACCACAGAAACGCCCAGAAAC
AAGCATAATCTTCCCCTCCCTCCTTTGCTTCCTCCCTCTCTCCCTCCCTC
CCTCCCTCCTTCCCTCCGCTCGTTCCCTCCAGAATCATTGGAACAATGCC
CGTCGTCGCATGAGCATGGGGAAAAGTTTTTCGAGCCGGGGGCATGACGA
GGTAGGCCCTTCCTCCCTCCCTCCTTCCCACCCTCCTTCCCTTTCTCCTT
CCCTCCTTTTCTCCCTCCCTCCCTAGCTTTTCTGCTTCCTTCCTCCGATC
CCCTTGACCCCTCTCATTAATTTTTTCTTTTCCTTCTCAACACGATGCTG
GACTTGAACATCATCTCATAACCCCTCTGCGCATGCCATGTCCCTCATCC
CCACCCCACCTACCTACCTACCTCCCTCGCTCCCTCGCTCTCTCACAGCC
CTACGGCGGGAGCCGTCGAGGCAGCAAAATTGAAAGCGGCAACTCCCTCT
CCATGGATGGTGCCGGCCAGAGCAGCGACCCGCCCTCCCTCCCGCCCTCC
TTCCCGCCCTCCCTCCCTCCCCACCCCTCGACGGGCATCTCCCCTCCTCC
CATGCCACCCCCTCCCACCTCCATCAGCGCGACCGAGACCCTCCCTCTCT
CCCCCCGGACCTCCATCCCGCCCTCCCTCGGTCCCTCCGACAGTGCCGCG
ACCCTTCTGCCCGCCCATTTCCTCCCTCATCCCCTGACTACCTCCGAACA
CACCGAGTCCCGTCCCTCCCCGGTTGAAGCTACCTTAACTAATTCTCCTT
CCTCGTCCCTTCTGCCTGTCTCGCAGCAGGCGAAGGAGTGTGAGGGGAAG
GGCCAAGGGGGCGTCCTGGGGGTGGAGGCAGGGGGGCGGGTGGAGGGAGG
GAGGCAGGACGGGAAGGAGGGAGGGCCGGACGAGGCCAAGATCCTTCTCT
CCTTGAGCTGCGGCCCCAGCCGGGGGAAGGAGGAAGGGAGGGAGGAAGGG
AGGGAGGAAGGGGGGGTGTCGGACTACGGGGTGGGAAGCCCGGGGGGGCA
ACGGAAACGGGGGCGGGCGGGTAGAGGCCAGAGTGGGGAGAGATTGGTCT
CCTCGGTGATGGAGGAGGATACCGCCTCCTCCCCGGTACCCTCGCAAGGG
GGAGGGCACAGCAGCAATAGCAGCCTGGGTCAGGAGAGTCAAGGGGAAGG
GATGGAGGGAGGGGAGAAACAGGAGATGATGCGGACGTTGGCGGGCTCGC
CGGAGGGGGCCGAAGCGAGGGAGGAAGTGCTGGGAGTTTGAAGGGGGGGA
GGCAGGTAGGAGGGATCGTGGCGCACGCGCAGAGTCTGCTTGATATACTT
CCCACGTCCACGGGTATGCGCGAAGGAAAGGAAGCGGCTTTTTCCCCTTG
TTCCAGAGTCCCGCCCTCCGACTCTTTCTTCCCCCTTCTCGAAGTAAAGT
TCAGGCCCCAAGGACGGGAAGGAGGGCGGGAAGCGGGGAGAGGGGAGGCT
TGCCCTCAAGACAGCCTCGGGCATGGTGACATGAAAGCATCCCTCGCAGG
AACTAATACTTCGTATCAATCGGGTGACTTTGTGCATTGATAAATGGAAA
AGAACACGAGGGGAGGCGGGAGGAAATACGGAAGAGGGGGGCTGGCTTGG
GAGGAGGTCAAGACGTACTCAATACAACTAAATTGCCCAAGGGAGCAAGG
GACCATGGAGATGGGCCCGAAAAGCATGCAAATAACATGGGAGCGATGCA
back to topCoding sequence (CDS) from alignment at KK037251.1:138770..141819- >rna9024 ID=rna9024|Name=rna9024|organism=Nannochloropsis gaditana|type=CDS|length=3564bp|location=Sequence derived from alignment at KK037251.1:138770..141819- (Nannochloropsis gaditana)
CCCTACGGCGGGAGCCGTCGAGGCAGCAAAATTGAAAGCGGCAACTCCCT
CTCCATGGATGGTGCCGGCCAGAGCAGCGACCCGCCCTCCCTCCCGCCCT
CCTTCCCGCCCTCCCTCCCTCCCCACCCCTCGACGGGCATCTCCCCTCCT
CCCATGCCACCCCCTCCCACCTCCATCAGCGCGACCGAGACCCTCCCTCT
CTCCCCCCGGACCTCCATCCCGCCCTCCCTCGGTCCCTCCGACAGTGCCG
CGACCCTTCTGCCCGCCCATTTCCTCCCTCATCCCCTGACTACCTCCGAA
CACACCGAGTCCCGTCCCTCCCCGGTTGAAGCTACCTTAACTAATTCTCC
TTCCTCGTCCCTTCTGCCTGTCTCGCAGCAGGCGAAGGAGTGTGAGGGGA
AGGGCCAAGGGGGCGTCCTGGGGGTGGAGGCAGGGGGGCGGGTGGAGGGA
GGGAGGCAGGACGGGAAGGAGGGAGGGCCGGACGAGGCCAAGATCCTTCT
CTCCTTGAGCTGCGGCCCCAGCCGGGGGAAGGAGGAAGGGAGGGAGGAAG
GGAGGGAGGAAGGGGGGGTGTCGGACTACGGGGTGGGAAGCCCGGGGGGG
CAACGGAAACGGGGGCGGGCGGGTAGAGGCCAGAGTGGGGAGAGATTGGT
CTCCTCGGTGATGGAGGAGGATACCGCCTCCTCCCCGGTACCCTCGCAAG
GGGGAGGGCACAGCAGCAATAGCAGCCTGGGTCAGGAGAGTCAAGGGGAA
GGGATGGAGGGAGGGGAGAAACAGGAGATGATGCGGACGTTGGCGGGCTC
GCCGGAGGGGGCCGAAGCGAGGGAGGAAGTGCTGGGAGTTTGAAATCATT
GGAACAATGCCCGTCGTCGCATGAGCATGGGGAAAAGTTTTTCGAGCCGG
GGGCATGACGAGATGGTCCGAAAGTGGTCGGCGGAGGAGGACGCGGAGAT
GGTCCGGTTGGTGAAGGAGCTGGGCACGAAGCAATGGGGTCAGATTGGGA
TTCAATTGGGCGGGCGGAGTGGGAAACAATGCCGGGAACGTTGGCACAAC
CAGCTCGATCCGAACATCAAAAAGGAGGCCTGGAGTGCGGAGGAGGAGAT
GGTGCTCCAGCAGAAGCATGCGGAGTACGGGAACCGGTGGGCGGAAATTG
CGCGCTTTCTCCCGGGGCGGACGGACAATGCGATCAAGCCCTACGGCGGG
AGCCGTCGAGGCAGCAAAATTGAAAGCGGCAACTCCCTCTCCATGGATGG
TGCCGGCCAGAGCAGCGACCCGCCCTCCCTCCCGCCCTCCTTCCCGCCCT
CCCTCCCTCCCCACCCCTCGACGGGCATCTCCCCTCCTCCCATGCCACCC
CCTCCCACCTCCATCAGCGCGACCGAGACCCTCCCTCTCTCCCCCCGGAC
CTCCATCCCGCCCTCCCTCGGTCCCTCCGACAGTGCCGCGACCCTTCTGC
CCGCCCATTTCCTCCCTCATCCCCTGACTACCTCCGAACACACCGAGTCC
CGTCCCTCCCCGGTTGAAGCTACCTTAACTAATTCTCCTTCCTCGTCCCT
TCTGCCTGTCTCGCAGCAGGCGAAGGAGTGTGAGGGGAAGGGCCAAGGGG
GCGTCCTGGGGGTGGAGGCAGGGGGGCGGGTGGAGGGAGGGAGGCAGGAC
GGGAAGGAGGGAGGGCCGGACGAGGCCAAGATCCTTCTCTCCTTGAGCTG
CGGCCCCAGCCGGGGGAAGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAG
GGGGGGTGTCGGACTACGGGGTGGGAAGCCCGGGGGGGCAACGGAAACGG
GGGCGGGCGGGTAGAGGCCAGAGTGGGGAGAGATTGGTCTCCTCGGTGAT
GGAGGAGGATACCGCCTCCTCCCCGGTACCCTCGCAAGGGGGAGGGCACA
GCAGCAATAGCAGCCTGGGTCAGGAGAGTCAAGGGGAAGGGATGGAGGGA
GGGGAGAAACAGGAGATGATGCGGACGTTGGCGGGCTCGCCGGAGGGGGC
CGAAGCGAGGGAGGAAGTGCTGGGAGTTTGAAATCATTGGAACAATGCCC
GTCGTCGCATGAGCATGGGGAAAAGTTTTTCGAGCCGGGGGCATGACGAG
ATGGTCCGAAAGTGGTCGGCGGAGGAGGACGCGGAGATGGTCCGGTTGGT
GAAGGAGCTGGGCACGAAGCAATGGGGTCAGATTGGGATTCAATTGGGCG
GGCGGAGTGGGAAACAATGCCGGGAACGTTGGCACAACCAGCTCGATCCG
AACATCAAAAAGGAGGCCTGGAGTGCGGAGGAGGAGATGGTGCTCCAGCA
GAAGCATGCGGAGTACGGGAACCGGTGGGCGGAAATTGCGCGCTTTCTCC
CGGGGCGGACGGACAATGCGATCAAGCCCTACGGCGGGAGCCGTCGAGGC
AGCAAAATTGAAAGCGGCAACTCCCTCTCCATGGATGGTGCCGGCCAGAG
CAGCGACCCGCCCTCCCTCCCGCCCTCCTTCCCGCCCTCCCTCCCTCCCC
ACCCCTCGACGGGCATCTCCCCTCCTCCCATGCCACCCCCTCCCACCTCC
ATCAGCGCGACCGAGACCCTCCCTCTCTCCCCCCGGACCTCCATCCCGCC
CTCCCTCGGTCCCTCCGACAGTGCCGCGACCCTTCTGCCCGCCCATTTCC
TCCCTCATCCCCTGACTACCTCCGAACACACCGAGTCCCGTCCCTCCCCG
GTTGAAGCTACCTTAACTAATTCTCCTTCCTCGTCCCTTCTGCCTGTCTC
GCAGCAGGCGAAGGAGTGTGAGGGGAAGGGCCAAGGGGGCGTCCTGGGGG
TGGAGGCAGGGGGGCGGGTGGAGGGAGGGAGGCAGGACGGGAAGGAGGGA
GGGCCGGACGAGGCCAAGATCCTTCTCTCCTTGAGCTGCGGCCCCAGCCG
GGGGAAGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGGGGGTGTCGG
ACTACGGGGTGGGAAGCCCGGGGGGGCAACGGAAACGGGGGCGGGCGGGT
AGAGGCCAGAGTGGGGAGAGATTGGTCTCCTCGGTGATGGAGGAGGATAC
CGCCTCCTCCCCGGTACCCTCGCAAGGGGGAGGGCACAGCAGCAATAGCA
GCCTGGGTCAGGAGAGTCAAGGGGAAGGGATGGAGGGAGGGGAGAAACAG
GAGATGATGCGGACGTTGGCGGGCTCGCCGGAGGGGGCCGAAGCGAGGGA
GGAAGTGCTGGGAGTTTGAAATCATTGGAACAATGCCCGTCGTCGCATGA
GCATGGGGAAAAGTTTTTCGAGCCGGGGGCATGACGAGATGGTCCGAAAG
TGGTCGGCGGAGGAGGACGCGGAGATGGTCCGGTTGGTGAAGGAGCTGGG
CACGAAGCAATGGGGTCAGATTGGGATTCAATTGGGCGGGCGGAGTGGGA
AACAATGCCGGGAACGTTGGCACAACCAGCTCGATCCGAACATCAAAAAG
GAGGCCTGGAGTGCGGAGGAGGAGATGGTGCTCCAGCAGAAGCATGCGGA
GTACGGGAACCGGTGGGCGGAAATTGCGCGCTTTCTCCCGGGGCGGACGG
ACAATGCGATCAAG back to top
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