rna9023, rna9023 (mRNA) Nannochloropsis gaditana

Overview
Namerna9023
Unique Namerna9023
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length534
Alignment locationKK037251.1:134650..135857 -

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Properties
Property NameValue
ProductMajor facilitator superfamily domain protein
Orig transcript idgnl|cribi|Naga_100412g1.3338.mrna
Orig protein idgnl|cribi|Naga_100412g1.3338
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:134650..135857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100412g1gene8749Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21678.1cds8993Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9023rna9023-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9023 ID=rna9023|Name=rna9023|organism=Nannochloropsis gaditana|type=mRNA|length=534bp
ATGACAGTCTGGGCGTGGCGCGGGGTTCTCCCGGGGAGAGAAATCATTTT
CCCTTCCGCTCGTTGTCGGTTGGGTGGTACCGGAGGCTGGAGGCACACTG
ACTCGGGACTGACGCGTTTCCCCTTCTTGTTGCCCCGCGCTCCAGGCCTG
CCTCCTCCGCACGGATCCTCCCAACCTCCTCCACCCTGGGGCGGATACCC
CCCCCCCCGGGACAAGAGCAGGGGAACCGCCTCGACGCCCCTCCCTCCCT
TCCCCCCGGGCCCTACCCTTCCCCCTCCACGCCGGCACAACGTGTGGACC
CGGCTCAGATTCCCCGGCCAGCGGACGGTCCCGGTTCCGAGGGCGGGGGG
GAGGGCGGGAGGGAGGGCGGGCCGCCCACGCCCCTCACCTACCGGACCTT
GAGCAACGGGGAGAAAGCACCCCCGGCGTCTACCCGTTCCTTCCTTGCGC
TGGACGACGGGAACTGTTCCCCTCGGTTCATGCGCGCGACCACCTACTAC
GTGCCCTTAACGGCCGAGGTGGCGGCTCAAACCA
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protein sequence of rna9023

>rna9023-protein ID=rna9023-protein|Name=rna9023|organism=Nannochloropsis gaditana|type=polypeptide|length=342bp
MALFKADISEDQLISHRKHPPQLPPTPATTSVLQASPKPPFHSFWALRAF
LCCSITWSAVMTGCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCP
LVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNG
VLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRT
LFLLLTAPFLLFLSLLLLCPHWIVPRTSSFRIPPPSSTHASPAYPTGAGC
REDEASDLPPPRLTPASFLPGMPDDQGGARAYLHALFQALGQNFLLPVYI
VTVLLVSGALGFFDTALAEHLGGCEGKEGGREGGRECSRVLG
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mRNA from alignment at KK037251.1:134650..135857-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9023 ID=rna9023|Name=rna9023|organism=Nannochloropsis gaditana|type=mRNA|length=1208bp|location=Sequence derived from alignment at KK037251.1:134650..135857- (Nannochloropsis gaditana)
GCCAGGTCATAACTGGACCAGATCGGGCAGTCAGTCCATGCCTTATATAT
AGGGTAGCATCAACATGCCCCACTTGGTGGACAGCGAGGACGAGCAGCGC
GCTATACGTTAAGCCTTGATACGAAACCATCACCGTATCTGGGGCTGCTG
ACGATTTCTCAGGGTTGAATGAAAAAGCTATGGCTTTATTTAAGGCTGAT
ATATCAGAAGACCAATTGATATCGCACCGAAAGCATCCACCACAGCTGCC
TCCTACCCCGGCAACGACAAGTGTTCTGCAAGCCTCTCCTAAGCCTCCAT
TCCACTCCTTCTGGGCCCTCCGCGCTTTTCTATGCTGCTCAATTACCTGG
TCGGCAGTCATGACAGGTTGCCTCGGTCCTTTTTTCCCGCTCTACATGAA
GGAGAACTTCCAAGCCACCACAACCTTGGTGGGTTTCATATTCTCCGTCA
CCTCCCTTGTCCAATTTCTGACCTGCCCCCTGGTGGCCCATATCTCCCAT
CGAATCACTCGCCTGGGAAGCTTGCGCCTCGCCATCCTCATTTTGATCGG
AGGAGGATTCATTTTCGGACTTTCGCACCATGCTGCGGGTTTCCTCGCGG
GTCGGCTCTTGCAAGGAATGGGCAACGGCGTGCTGGAAGTGGCCGGTCTC
AGCCTCCTCATGCGTCATTCCCCGGACATTCGCCGGGACATCGGGCTTTT
GGAAGGGTCTTCGGCCCTCGGATTTCTGTTCGGACCGTTGCTGGGTGGTC
TAATCTTCCACTGGTGGGGTATCCGAACACTTTTCCTCCTCCTCACCGCC
CCCTTCCTCCTCTTCCTCTCCCTCCTGCTCCTCTGCCCTCATTGGATCGT
TCCCCGAACGTCGTCCTTCCGCATCCCGCCGCCGTCGAGCACACACGCCT
CCCCTGCGTACCCCACGGGTGCAGGGTGTAGGGAAGACGAGGCCTCAGAC
CTTCCTCCCCCTCGCTTGACCCCTGCCTCTTTCCTCCCTGGGATGCCAGA
TGACCAGGGCGGAGCACGTGCCTACTTGCACGCCTTATTTCAGGCCCTTG
GTCAGAATTTCCTCCTCCCTGTGTACATTGTCACCGTTCTTCTCGTCTCC
GGGGCCCTCGGTTTCTTTGACACGGCATTGGCGGAGCATTTGGGTGGGTG
TGAAGGGAAAGAAGGAGGGAGGGAGGGAGGGAGGGAGTGTAGTCGTGTCC
TAGGCTGA
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Coding sequence (CDS) from alignment at KK037251.1:134650..135857-

>rna9023 ID=rna9023|Name=rna9023|organism=Nannochloropsis gaditana|type=CDS|length=1029bp|location=Sequence derived from alignment at KK037251.1:134650..135857- (Nannochloropsis gaditana)
ATGGCTTTATTTAAGGCTGATATATCAGAAGACCAATTGATATCGCACCG
AAAGCATCCACCACAGCTGCCTCCTACCCCGGCAACGACAAGTGTTCTGC
AAGCCTCTCCTAAGCCTCCATTCCACTCCTTCTGGGCCCTCCGCGCTTTT
CTATGCTGCTCAATTACCTGGTCGGCAGTCATGACAGGTTGCCTCGGTCC
TTTTTTCCCGCTCTACATGAAGGAGAACTTCCAAGCCACCACAACCTTGG
TGGGTTTCATATTCTCCGTCACCTCCCTTGTCCAATTTCTGACCTGCCCC
CTGGTGGCCCATATCTCCCATCGAATCACTCGCCTGGGAAGCTTGCGCCT
CGCCATCCTCATTTTGATCGGAGGAGGATTCATTTTCGGACTTTCGCACC
ATGCTGCGGGTTTCCTCGCGGGTCGGCTCTTGCAAGGAATGGGCAACGGC
GTGCTGGAAGTGGCCGGTCTCAGCCTCCTCATGCGTCATTCCCCGGACAT
TCGCCGGGACATCGGGCTTTTGGAAGGGTCTTCGGCCCTCGGATTTCTGT
TCGGACCGTTGCTGGGTGGTCTAATCTTCCACTGGTGGGGTATCCGAACA
CTTTTCCTCCTCCTCACCGCCCCCTTCCTCCTCTTCCTCTCCCTCCTGCT
CCTCTGCCCTCATTGGATCGTTCCCCGAACGTCGTCCTTCCGCATCCCGC
CGCCGTCGAGCACACACGCCTCCCCTGCGTACCCCACGGGTGCAGGGTGT
AGGGAAGACGAGGCCTCAGACCTTCCTCCCCCTCGCTTGACCCCTGCCTC
TTTCCTCCCTGGGATGCCAGATGACCAGGGCGGAGCACGTGCCTACTTGC
ACGCCTTATTTCAGGCCCTTGGTCAGAATTTCCTCCTCCCTGTGTACATT
GTCACCGTTCTTCTCGTCTCCGGGGCCCTCGGTTTCTTTGACACGGCATT
GGCGGAGCATTTGGGTGGGTGTGAAGGGAAAGAAGGAGGGAGGGAGGGAG
GGAGGGAGTGTAGTCGTGTCCTAGGCTGA
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Synonyms
Publications