EWM21678.1, cds8993 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|585101952|gb|EWM21678.1| (Major facilitator superfamily domain protein [Nannochloropsis gaditana]) HSP 1 Score: 677.937 bits (1748), Expect = 0.000e+0 Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0
Query: 1 MALFKADISEDQLISHRKHPPQLPPTPATTSVLQASPKPPFHSFWALRAFLCCSITWSAVMTGCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLTAPFLLFLSLLLLCPHWIVPRTSSFRIPPPSSTHASPAYPTGAGCREDEASDLPPPRLTPASFLPGMPDDQGGARAYLHALFQALGQNFLLPVYIVTVLLVSGALGFFDTALAEHLGGCEGKEGGREGGRECSRVLG 342
MALFKADISEDQLISHRKHPPQLPPTPATTSVLQASPKPPFHSFWALRAFLCCSITWSAVMTGCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLTAPFLLFLSLLLLCPHWIVPRTSSFRIPPPSSTHASPAYPTGAGCREDEASDLPPPRLTPASFLPGMPDDQGGARAYLHALFQALGQNFLLPVYIVTVLLVSGALGFFDTALAEHLGGCEGKEGGREGGRECSRVLG
Sbjct: 1 MALFKADISEDQLISHRKHPPQLPPTPATTSVLQASPKPPFHSFWALRAFLCCSITWSAVMTGCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLTAPFLLFLSLLLLCPHWIVPRTSSFRIPPPSSTHASPAYPTGAGCREDEASDLPPPRLTPASFLPGMPDDQGGARAYLHALFQALGQNFLLPVYIVTVLLVSGALGFFDTALAEHLGGCEGKEGGREGGRECSRVLG 342
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|585099635|gb|EWM20208.1| (major facilitator superfamily mfs_1 [Nannochloropsis gaditana]) HSP 1 Score: 177.178 bits (448), Expect = 8.197e-50 Identity = 94/179 (52.51%), Postives = 127/179 (70.95%), Query Frame = 0
Query: 47 LRAFLCCSITWSAVMTGCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLTAPFLLFLSLLLLCPHWIVP 225
LR F+ I WS+ + CLGP+FPLY+K F A++TL+G IFS+TS+VQFLTCPLV +S +RL +L + +++L G +FG+ GF+ GRLLQG+GNG LEV+GLSLLMR S D+RRDIGLLEG+S +G L GPL+GG + G R LF ++TAP L + LL + P ++P
Sbjct: 97 LRFFITFGIAWSSTIISCLGPYFPLYVKRKFGASSTLLGLIFSITSIVQFLTCPLVGPLSRAFSRLVTLIIGLVVLAAGALLFGMLDSIPGFIIGRLLQGIGNGFLEVSGLSLLMRFSTDLRRDIGLLEGASGVGSLLGPLIGGFLSARLGFRALFGMMTAPLLALILLLWVRPGAVLP 275
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|553177040|ref|XP_005852431.1| (major facilitator superfamily mfs 1, partial [Nannochloropsis gaditana CCMP526] >gi|422296102|gb|EKU23401.1| major facilitator superfamily mfs 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 179.874 bits (455), Expect = 3.939e-49 Identity = 94/179 (52.51%), Postives = 127/179 (70.95%), Query Frame = 0
Query: 47 LRAFLCCSITWSAVMTGCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLTAPFLLFLSLLLLCPHWIVP 225
LR F+ I WS+ + CLGP+FPLY+K F A++TL+G IFS+TS+VQFLTCPLV +S +RL +L + +++L G +FG+ GF+ GRLLQG+GNG LEV+GLSLLMR S D+RRDIGLLEG+S +G L GPL+GG + G R LF ++TAP L + LL + P ++P
Sbjct: 97 LRFFITFGIAWSSTIISCLGPYFPLYVKRKFGASSTLLGLIFSITSIVQFLTCPLVGPLSRAFSRLVTLMIGLVVLAAGALLFGMLDSIPGFIIGRLLQGIGNGFLEVSGLSLLMRFSTDLRRDIGLLEGASGVGSLLGPLIGGFLSARLGFRALFGMMTAPLLALILLLWVRPGAVLP 275
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|553183476|ref|XP_005853905.1| (permease (major facilitator superfamily) [Nannochloropsis gaditana CCMP526] >gi|422295160|gb|EKU22459.1| permease (major facilitator superfamily) [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 102.449 bits (254), Expect = 2.185e-20 Identity = 87/276 (31.52%), Postives = 136/276 (49.28%), Query Frame = 0
Query: 60 VMTGCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFI-FGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLTAPFLLFLSLLLLCPHWIVPRTSSF-RIPPPSSTHASPAYPTGAGCREDEASDLPPPRLTPASFLPGMPDDQG------GARAYLHALFQALGQNFL----LPVYIV--TVLLVSGALGFFDTALAEHL 321
+++ + PFFP + K A +T+VG IFS+ L FLT ++ S R R + + LIL+GGG + FG + + R++QG+G G + VAG++LL++ S +I RD+GL + + LG++ GP LG +++ + G R L L+L A + ++ L L P ++ P S + +ST SPA E PP S +P G A A LH Q+F LP+ +V T + +LG FD + HL
Sbjct: 100 ILSAAMVPFFPDHAKRYLNADSTIVGVIFSLYPLSLFLTSLVIGMASARFGR-AFVYTSGLILLGGGTVGFGFCNDLTSIMIMRVVQGIGGGCINVAGMALLLQVSINIERDVGLDQAAIGLGYILGPPLGAILYAYMGFRDLNLVLGA---IPIAQLFLFP-FVAPSIPSLTSVGDTASTGTSPAKDDAPQSLEPAKGRTKPPSDDSLSLRTPIPTSLGVPSLLLEAPASLHP-----AQSFFALTSLPILVVATTSVFAFTSLGLFDPLVLPHL 365
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|551678537|ref|XP_005842021.1| (hypothetical protein GUITHDRAFT_99681 [Guillardia theta CCMP2712] >gi|428186190|gb|EKX55041.1| hypothetical protein GUITHDRAFT_99681 [Guillardia theta CCMP2712]) HSP 1 Score: 88.9669 bits (219), Expect = 7.216e-16 Identity = 79/288 (27.43%), Postives = 124/288 (43.06%), Query Frame = 0
Query: 56 TWSAVMT-GCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLTAPFLLFLSLLLLC----PHWIVPRTSSFRIPPPSSTHASPAYPT---GAGCREDEASDLPPPRLTPASFLPGMPDDQGGARAYLHALFQALGQNFLLPVYIVTVLLV--SGALGFFDTALAEHLGGCEGKEGGREG 333
T S +MT + PFFP Y KEN A T++G I + Q ++ PL + +S +I+R L L + IL G +F S+ F+ R LQG+G+ A L+L+ I RD+GL+E +G++ GP +GG+ + ++G + +L +L + L I ++ + I P T G GC + A G G AL+Q+ + PV + +V + A GF + ALA HL G + G
Sbjct: 54 TLSTMMTVSLIAPFFPGYAKENLDAPETVIGLIVACNPFAQVMSTPLWSFLSTKISRSDRLSLGLSILAIGTIMFAYSNQVTTFMIARALQGIGSQGSNSAALALV------IERDLGLIEFIVGVGYMIGPAVGGISYRYFGFQIAVMLPAVICVLIACAVKLSFQHRETLIRSASNEYLIVPQEEEGEGEIRSTANVGEGCSQVSAGG-------------GSESQPGDTIVDKDALWQSWKRLTNPPVLCICFGIVAHAAAQGFKELALARHLKIALGADSSTAG 322
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|585104612|gb|EWM23520.1| (permease (major facilitator superfamily), partial [Nannochloropsis gaditana]) HSP 1 Score: 73.9442 bits (180), Expect = 7.349e-12 Identity = 46/148 (31.08%), Postives = 74/148 (50.00%), Query Frame = 0
Query: 61 MTGCLGPFFPLYMKEN--FQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLT 206
+ LGPF+P Y + A++ +VG IF+ L Q LT P+ +S R RL + + +L G +F L + + R LQG + V+ +L++ S + RD+G+ E G + GP LGG +F G + +FL L+
Sbjct: 41 LVSILGPFYPPYATSSPSLHASSFMVGLIFAAYPLAQILTAPVAGSLSARYGRLPTCVGGLFLLTGSTVLFALGTRVSLHVLARFLQGSAGACVNVSAFALVLEVSQALPRDLGVQEVVVGAGCMVGPTLGGFLFESLGFQAMFLALS 188
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|585105539|gb|EWM24167.1| (sugar transporter, partial [Nannochloropsis gaditana]) HSP 1 Score: 75.8702 bits (185), Expect = 1.969e-11 Identity = 45/152 (29.61%), Postives = 79/152 (51.97%), Query Frame = 0
Query: 65 LGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLTAPFLLFLSLL 216
+ PFF + ++LVG FS+++L L PL AH+ R +L L ++ + F LS + L+ R QG+ G++ VA ++LL+ +PDI +++GL E ++ + P+LGG + + +L L+AP L + +L
Sbjct: 285 ISPFFQEDAQSRLGLPSSLVGLTFSLSALTSMLITPLAAHLCQAFGRYRTLFLGYVLALLANVGFALSRTSPSLLSFRSAQGLAMGLVAVASMTLLIAGAPDIVKEMGLQELVISVTLIIAPILGGGFYEVMSVERTYLALSAPLLGMVVVL 436
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|406982626|gb|EKE03917.1| (major facilitator transporter [uncultured bacterium]) HSP 1 Score: 68.1662 bits (165), Expect = 4.589e-9 Identity = 58/174 (33.33%), Postives = 87/174 (50.00%), Query Frame = 0
Query: 63 GCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFI----FGLSHHAAGFLAGRLLQGM--GNGVLEVAGLSLLMRHSPDIRRDIGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLT-APFLLFLSLLLLCPHWIVPRTSS 229
G + P P Y E F A+ T +GF+F+ +L QFL P+ IS R +LA++I G FI FGL++ AGR++ GM N + A +S + + + GLL + LGF+ GP LGG++ WGI T L+ FL +++ L P + RT +
Sbjct: 21 GFILPLLPFY-AEIFGASATTIGFLFASYALAQFLAVPIFGKISDTYGR----KLALMISTVGDFIGFLMFGLANSIFMLFAGRIISGMTGSNYAVAQAYISDVTKEEER-SKSFGLLGATFGLGFIVGPFLGGVL-SIWGIATPALVAAGVSFLNLIAIYLFLPESLNKRTKT 187
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|1041546339|ref|XP_017301951.1| (PREDICTED: uncharacterized protein LOC103515020 [Diaphorina citri]) HSP 1 Score: 65.855 bits (159), Expect = 2.703e-8 Identity = 49/156 (31.41%), Postives = 73/156 (46.79%), Query Frame = 0
Query: 81 TTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRD---IGLLEGSSALGFLFGPLLGGLIFHWWGIRTLFLLLTAPFLLFLSLLL----LCPHWIVPRTSS 229
T VG +F + VQ L PLV ++HR+ + +I+ IF R LQG+G+ V+G+ +L PD R +G+ G ALG L GP GG+++ + G TAPFL+ +L L C + IV ++SS
Sbjct: 308 TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-------KTAPFLILSALALGDGCKCNYTIVQKSSS 456
BLAST of EWM21678.1 vs. NCBI_GenBank
Match: gi|817725295|ref|WP_046678310.1| (MFS transporter [Paenibacillus sp. DMB20] >gi|817371031|gb|KKO54230.1| permease [Paenibacillus sp. DMB20]) HSP 1 Score: 65.0846 bits (157), Expect = 3.834e-8 Identity = 44/139 (31.65%), Postives = 68/139 (48.92%), Query Frame = 0
Query: 63 GCLGPFFPLYMKENFQATTTLVGFIFSVTSLVQFLTCPLVAHISHRITRLGSLRLAILILIGGGFIFGLSHHAAGFLAGRLLQGMGNGVLEVAGLSLLMRHSPDIRRD--IGLLEGSSALGFLFGPLLGGLIFHWWGIR 199
G + P P Y E+ A+ T +G +FS +L F+ PL+ ++ ++ R G L ++ L G +F + +A R+LQG+ AGL+LL P R +GL A G L GP +GG +F W G +
Sbjct: 29 GLIVPILPSY-AESLGASQTRIGLLFSSYALTLFIATPLLGMLTDKVGRKGPLLWGMIGLAGTTVMFAFATEFWVLVAARMLQGIAAAATWTAGLALLADVYPSEERGAAMGLALSGQAAGTLLGPTVGGWLFEWGGYK 166 The following BLAST results are available for this feature:
BLAST of EWM21678.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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