rna9021, rna9021 (mRNA) Nannochloropsis gaditana

Overview
Namerna9021
Unique Namerna9021
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length958
Alignment locationKK037251.1:124269..127268 -

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Properties
Property NameValue
Productsec23/sec24 transport protein
Orig transcript idgnl|cribi|Naga_101213g1.9603.mrna
Orig protein idgnl|cribi|Naga_101213g1.9603
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:124269..127268 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101213g1gene8747Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21682.1cds8991Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9021rna9021-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9021 ID=rna9021|Name=rna9021|organism=Nannochloropsis gaditana|type=mRNA|length=958bp
CTTCCCCCTTCCTTAGGTGGACGACAACATGCGGAAGGCTCATGAACGAG
ACAGCGTCCTCAAGGAGAAATTCTGGTTCCGCAAACACTTGGCTCCTCCC
TTGCCCTCCGCCGCCGCCTCCGAAAAATCCGAAAAACCCGAACCCCCCGA
AAACCCCGACAAAGCCTTCGAAGGGGCCCAAAAGGCCGGCTTTGTCGCCT
CGTCCTCCTGCCAAGACCACATTTGGCAGGGAACGGCGGACGAGTACGAG
CTGATGAGTGTGGAAGAGATTTTGAACGGAAAAGGCGACTATTTCTTGGG
CCTGATTCCTCTCTGTCACATGTACCTCGACTACATTGGTTGCGACCGCG
AAACCTTCCGGCGGGTGTCGCTCTACCTGGACTTTATCGGTCGCAGAGGC
TCGGGGGAAACGATGACTACAGCCGCCTGGATGCGAAAGGTGGTGCAACA
ACACCCGGAGTACCAGCAAGACTCGGTTGTCACCCCCTCGATAGCCTACG
ACTTGATGATGGAGTGCAAACGCATCGGGGAAGGGCGTTTGCAGTGCCCC
GACCTCCTTGGGAACGTGAAGATCGATCCGATTTTTCCGGGGGAGGCTTA
CGATGTGTATTTGTCCGGGAACAAGATGGGGAACAGGGAGAGGTCAGAAT
TGCTGCGGGCATACAGGCGGCGGGAGCCTTTTCAGACGCACAAGGAGGGG
GGGAAGGGGAGGAAAGACGGGGGCCCAGAAAGGGAGGGACGGCGGGGACG
GGAAGGGAGAGAGCGAGTCTCACGACGAATTTTTCCATTACAAGGCGTGA
GCGGTGGAAGGAAGGTTTTGGGGTATAGGCTGGAGGGAATGAAGGAGGAT
TCGAGTTGGAGGAAGAAGGGGAAGGCGGAGGGTGTCGGCGTCCCATAGAG
GGGAGGGTATTTAACGGGCATGCATAAAGCATCAACGGAGGAAAGGAGTC
TGCACGGT
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protein sequence of rna9021

>rna9021-protein ID=rna9021-protein|Name=rna9021|organism=Nannochloropsis gaditana|type=polypeptide|length=424bp
MTAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAV
MKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKE
GSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYAT
LVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPES
LKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPA
KHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLD
AWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGR
VLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQ
KNEQSYVEYLCLVHKQIQNRLAGR
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mRNA from alignment at KK037251.1:124269..127268-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9021 ID=rna9021|Name=rna9021|organism=Nannochloropsis gaditana|type=mRNA|length=3000bp|location=Sequence derived from alignment at KK037251.1:124269..127268- (Nannochloropsis gaditana)
CCTTCCTTCCTCGCAGGGACCTCCGCCCCGAGTTCTCCCGCGGCTCGGTG
GACTGGGTCGTGGGCGGTGACTACTGCGTGCGCCCTCCCCAGCTTCCCCT
CTACGTCTTCTGCCTGGACGTGTCCGAAACGGCCGTGGAGGCCGGCCTGC
CCCTGATCGCCCTGGAAGGCTTGCGCGACGCGATCAAAGCCAACCTTCTC
CCCGGCGGAGAAAAGGCTCGGGTGGGCCTCGTCACGTTTGCCAATCGGGT
GCAATTTTACGGCGTCGGTGCCGGGTGGGAGGGAGGGAAAGTTGGGGAAG
GGGGTTCCCCGCCCTCGGTCCACGTCATGGGCGATGTGGACGACCCCTTC
TCCGCCCTCCCGCCCGACCAATGGATCGTGGCGGACAAGCCGAAGTTCTT
GGCGCTGCTGGATCACATTCCTGCCTTGACCTTCGGTGCGGGCATGGCGG
GGCCGGACGCGGCGGGGGGAGGGTCGGGGGGAATGTCCGGGTATCCAGGG
CGGGAGCGGGAGGAGTCGGCGAGTGCGGCGGCCGTGGAGGCGGTGGGAGA
TGCGTTGGCCACATTGGGCGGACGGGTCTTCCTCTTCACGGCGTCGAGGT
AGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCCGGGCCAGGACCCC
ACCTTTCCCCGTTCTCTTCTTGTCTCAGACTTATGCTGCTGCCTCTTCCC
GTCCTCGTCCTCATTTTTTTTCTCCTTTCGACCCCGCCATCTTTTTTCCC
TCCCGGGGGCGCCTGGTCTTTCCCCTAGGCCGACGCGCGGGGCGGGTGCT
CTTCGTCTTAGGGCAGATCCCAGAGACTACGGCTCCGAGAGGGAGAACGC
ACTCTATTGCCCGGTTGGGGGATGCATTGCCGGAAAATCCTCCGTAAGCA
GCGGGACGGGCCCGGCTGCGGTGGCGAAGTCGAAGGACGATAAGGCCCTT
GGGGACTATTACCAGCGACTGGGCTCGGTCTTGGCCGGTCGGCAGGTTTG
CCTCGACATTTTCATCTGCCACCCCGCCCCTCCCTCGGTCCCGTCCTCCA
CCGGTCCCTCCCCCGGTCCTTCCTCCTCCGCCTTTACCAATTTCTTGGAT
TTGGGCACCCTGGGGACACTCACGCACATGACGGCCGGACGCCTCCATTA
CTTCCCCGGGCCCGTTGCGTCCCCAACCTCCCCCGCGGCCGCCGCCTCCC
TCCCGTCCTCCCTCACGCCCACCTTCCTCACGGCCCTCCGGAACGCCCTC
GCCTCCCCCCTCGCCCAGGAAGCCGTGATGAAGATCCGTTCCTCCGTCGG
CCTCAGCCTCAAGCACTACGTGGCTCCGGGTATCATCCACCCGTCCGAAG
AACTCGAACTGGCCGCCCTGGACCCGTCCCAATCCTTCGTCGCTGAATTC
CTCCACGACGGGGAGAAGATCAAGGAGGGCAGCCGTGTCTACCTCCAGCT
CGCCCTCCTGTACACCCAGGGGGGGACCGGCCAACGCATGGTCCGTGTCC
ACAATCTGCAGCTCCCGACGGCTTCGGCTGTCTCGGGCGTCTTCCGGTAT
GCGGACATGGAAGCGATCTACGCCACCCTGGTCAAGCAAGCCGTCTGGCA
GGCCTGGTCGGAGCCCTTGGTGCGAGTCCGGGAACAACTGACACGCGCCT
GCGTGGACATGCTCTACCAATACCGACAACTCTGCGCAGCGTCCTCCCCC
CCCGGCCAATTGATCCTCCCCGAATCGCTCAAGCTCCTGCCTCTGTACGC
CTTGGCCCTCCTGAAGAGCGATGCCCTGCGCGTGAACCCCCCCGAGGCTG
GGCGTGCCCACGGCCTCCCGGACCCCACGGCCGACGTCCGGGCCGCCACC
TTGCACGCATTCTTGTCGGCGCCTGCCAAGCACTTGGTGCACATGACATA
CCCTCGTCTCTACGAAGTGGTGGGTGTGGGAGGCGGGCGGGACGACACAG
CGGGCTCGATGGGCTTGCTCCGGTTGAACGGATGCTCCGCCGAGAGCTTG
ATCGACGACGGGGTCTTCCTCTTGGACGCTTGGAATCAAACTTACCTCTA
CGTGGGGCGGGACGTGGGGACGAGGGTATGGACCGGCCTCTTCAACCGGT
CGGGCCCGCCGGAGAACGCGCACGAAGCCGGGTGCACCCTAGCCTTGGCC
GTAGAGACGTCGGATATGGCGGGGAGGGTGCTGGAGCTGCTGGAGGAGTT
GTGTGACGGGGATCGGAGCGGATATGGGGTCGGGAAAGGGGCGGTTCCAG
CCATGCAGGTGGTGGTGGCCGGGTCAGGGAGCCCCTCCGAGGCCCATTTC
ATCAAAATGTTGGTGGACGATCGGCAGAAGAACGAGCAGTCCTACGTGGA
GTACCTGTGTTTGGTCCATAAACAGATCCAGAACCGGTTGGCGGGTCGGT
AGGAGGGGCACAAGGAGGAGAAGGCGGATGGTCTCAGCCATGGGGTGGCT
CCTTGGACGTGCGAATCGAGGATGGAGGAGGAGTGGGAGGAGGAAAGCAG
GGCCGAGGGCGAACGGTACTGGAACGGAAGAGGGAAATCGGTGGGGGGTA
GGGGGATAGGGGTGGCAGTAGGTGCCCGAGTCAATTTTACAAAGGGATTG
AACGCCATTACGATGGGATTGACGGAGGACGTAACGATGGCTGGTGGAGC
CAGCGCTGGTCTCTTGGGTGCATCCGACGCTTAGTAGTGGGGGGGTGGAA
GGCGCCTTCTTCCAGGACATGGAACCTATCATATAGGGAGGATGACAACT
ATCCCAATCAGTGGGGGCGAGCGACAGAAAACTTGGCGGTCAGATATTGG
GTGCGTGGACGGAGCACCGGTGTAGAAGATAGACTCAAAGGATCAAAAGC
ACTGTCCCCAGGCACGGCAACCGAAGAAAACGAGTGTATTGTGCGGTATA
CACAGCCATTTTTGGCGTCGCACGGGAGCGTGTGTCGTTGCAAAGAGCGC
GTATTTGATTGCAAGCTTTTGATCTACTGCTGGGAGTCCCTCAGACGTGC
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Coding sequence (CDS) from alignment at KK037251.1:124269..127268-

>rna9021 ID=rna9021|Name=rna9021|organism=Nannochloropsis gaditana|type=CDS|length=1275bp|location=Sequence derived from alignment at KK037251.1:124269..127268- (Nannochloropsis gaditana)
ATGACGGCCGGACGCCTCCATTACTTCCCCGGGCCCGTTGCGTCCCCAAC
CTCCCCCGCGGCCGCCGCCTCCCTCCCGTCCTCCCTCACGCCCACCTTCC
TCACGGCCCTCCGGAACGCCCTCGCCTCCCCCCTCGCCCAGGAAGCCGTG
ATGAAGATCCGTTCCTCCGTCGGCCTCAGCCTCAAGCACTACGTGGCTCC
GGGTATCATCCACCCGTCCGAAGAACTCGAACTGGCCGCCCTGGACCCGT
CCCAATCCTTCGTCGCTGAATTCCTCCACGACGGGGAGAAGATCAAGGAG
GGCAGCCGTGTCTACCTCCAGCTCGCCCTCCTGTACACCCAGGGGGGGAC
CGGCCAACGCATGGTCCGTGTCCACAATCTGCAGCTCCCGACGGCTTCGG
CTGTCTCGGGCGTCTTCCGGTATGCGGACATGGAAGCGATCTACGCCACC
CTGGTCAAGCAAGCCGTCTGGCAGGCCTGGTCGGAGCCCTTGGTGCGAGT
CCGGGAACAACTGACACGCGCCTGCGTGGACATGCTCTACCAATACCGAC
AACTCTGCGCAGCGTCCTCCCCCCCCGGCCAATTGATCCTCCCCGAATCG
CTCAAGCTCCTGCCTCTGTACGCCTTGGCCCTCCTGAAGAGCGATGCCCT
GCGCGTGAACCCCCCCGAGGCTGGGCGTGCCCACGGCCTCCCGGACCCCA
CGGCCGACGTCCGGGCCGCCACCTTGCACGCATTCTTGTCGGCGCCTGCC
AAGCACTTGGTGCACATGACATACCCTCGTCTCTACGAAGTGGTGGGTGT
GGGAGGCGGGCGGGACGACACAGCGGGCTCGATGGGCTTGCTCCGGTTGA
ACGGATGCTCCGCCGAGAGCTTGATCGACGACGGGGTCTTCCTCTTGGAC
GCTTGGAATCAAACTTACCTCTACGTGGGGCGGGACGTGGGGACGAGGGT
ATGGACCGGCCTCTTCAACCGGTCGGGCCCGCCGGAGAACGCGCACGAAG
CCGGGTGCACCCTAGCCTTGGCCGTAGAGACGTCGGATATGGCGGGGAGG
GTGCTGGAGCTGCTGGAGGAGTTGTGTGACGGGGATCGGAGCGGATATGG
GGTCGGGAAAGGGGCGGTTCCAGCCATGCAGGTGGTGGTGGCCGGGTCAG
GGAGCCCCTCCGAGGCCCATTTCATCAAAATGTTGGTGGACGATCGGCAG
AAGAACGAGCAGTCCTACGTGGAGTACCTGTGTTTGGTCCATAAACAGAT
CCAGAACCGGTTGGCGGGTCGGTAG
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Synonyms
Publications