EWM21682.1, cds8991 (CDS) Nannochloropsis gaditana

Overview
NameEWM21682.1
Unique Namecds8991
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:124867..126141 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21682.1
Productsec23/sec24 transport protein
Orig transcript idgnl|cribi|Naga_101213g1.9603.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:124867..126141 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006886intracellular protein transport
GO:0006888ER to Golgi vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
GO:0030127COPII vesicle coat
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom
IPR012990Sec23_24_beta_S
IPR006900Sec23/24_helical_dom
Homology
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|585101959|gb|EWM21682.1| (sec23/sec24 transport protein [Nannochloropsis gaditana])

HSP 1 Score: 865.914 bits (2236), Expect = 0.000e+0
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
Query:    1 MTAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLAGR 424
            MTAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLAGR
Sbjct:    1 MTAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLAGR 424          
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|553192768|ref|XP_005855642.1| (sec24-like transport protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293419|gb|EKU20719.1| sec24-like transport protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
Query:  122 VRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLAGR 424
            VRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLAGR
Sbjct:    1 VRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLAGR 303          
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|298710495|emb|CBJ25559.1| (sec23/sec24 transport protein-related [Ectocarpus siliculosus])

HSP 1 Score: 218.009 bits (554), Expect = 6.852e-59
Identity = 158/442 (35.75%), Postives = 217/442 (49.10%), Query Frame = 0
Query:   27 SSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLV--RVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEV--------------------------VGVGGGRDDTAGSMGLL--RLNGC--------SAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSG-----PPENAHEAGCTLALAVETSD---MAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLA 422
            S L      ALR+   S  A EA++K+R + G S    + PGI +   ELE+A + P  + V    HDG K++EG  VY+Q ALLYT   +GQR VR H L LP    +  +FR  D+E + A + +QAV +A    +    + +Q+  + + ML+ YR+ CA+ SP GQLILPE+L++LPL+ L   K  ALR N        G PD  AD RAA L A  S   + +V + YP LY V                          VG G G +   G  G+     +G         ++E L   GVFLLD   +  LYVGR V   V + LF         PP   +E   T  L +   D    A RV  ++E L    R G    K  V    VVVA SG P EA F+ ++V+D+ K+  SYV+ LC +H +IQ+R+ 
Sbjct:  724 SHLREQLTGALRDHAHS--ASEAILKVRCTAGFSCTQRLGPGIENMPGELEVANITPHHTIVCRLEHDGRKLEEGGMVYIQSALLYTST-SGQRRVRCHTLGLPVTGLLPNIFRSTDVETVSAVMARQAVSRALGNKMAVDSILKQVEESMLAMLFAYRKKCASDSPAGQLILPEALRVLPLFTLCTHKMLALRPN-----SKGGAPDVRADERAARLLANHSLSVEGMVKVLYPSLYSVHDLPPDIGDAPPPRPPPPAAASEPGAVGAGVGLEGARGVEGIWGSPRSGVDVPVALPPTSEKLSSSGVFLLDNGEELLLYVGRSVSREVMSELFGVDAVPGPSPPGYGNEGASTSVLQLRQEDGYEQARRVRNVIEHL----RRGSAAHKPLV----VVVANSGVPEEARFVSLMVEDKTKHGTSYVDELCNLHHKIQSRMG 1149          
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|970660570|gb|KUF98107.1| (Transmembrane protein 18 [Phytophthora nicotianae])

HSP 1 Score: 193.741 bits (491), Expect = 3.912e-53
Identity = 152/450 (33.78%), Postives = 213/450 (47.33%), Query Frame = 0
Query:    1 MTAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKH-----YVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVR-----VREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALR----VNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGG--RDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELC----DGD--------RSGYGVGKGAVPAMQVVVAGSGSPSEAH-FIKMLVDDRQKNEQSYVEYLCLVHKQIQNRL 421
            +T GR+ Y P                SS      + L+  +      EAV+K+R S GL ++H     + A G    ++E+E A +D  +S    F +D E + EG+  Y+Q ALLYT+   G R VRVHNL L     +S VFR+AD++A  +   + A  Q   + L+R     V+E L   CV +L+ YR+ CA+SS  GQLILPESLKLLPLY LA LKS ALR     NPP      G  D  AD R   +    S P +  V   YP+LY V  +       D  G   L      +AE L ++G+FLL +    Y+Y+G      +   LF                   V+ +D A + L L E L     +GD        RS        +P  Q +   + +   A+ F+  LV+DR +N+ SYVE+L  VHK+IQ + 
Sbjct:   67 LTGGRVQYMP----------QFEKEQSSNRHHLTSMLQRLVDRDCGYEAVLKVRCSAGLRVEHSYGNFFNARGNAFTTDEMEFAVIDQDRSMCVTFAYD-EPLAEGTDAYIQAALLYTRSD-GLRCVRVHNLALQVEPLLSNVFRFADLDATCSVWQRSAARQFVDKQLMRATPMAVKESLVDQCVTVLFNYRKFCASSSSSGQLILPESLKLLPLYTLATLKSRALRGNLVGNPP-----RGFIDVRADERVMMMGLLNSLPVEFCVSAVYPKLYSVHDLADDCCTLDEDGKFILPPQLPPTAEKLDEEGIFLLHSAMCCYIYIGPKASPELLLDLF------------------GVDHADTAEQTLTLFETLDSEPPEGDGMSARERLRSLVEYLNSTIPISQPLEILTKNDWRANRFMSALVEDRTRNDVSYVEFLVQVHKKIQYKF 481          
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|672180177|ref|XP_008810271.1| (PREDICTED: protein transport protein Sec24-like At4g32640 isoform X3 [Phoenix dactylifera])

HSP 1 Score: 198.749 bits (504), Expect = 6.152e-53
Identity = 136/421 (32.30%), Postives = 214/421 (50.83%), Query Frame = 0
Query:    2 TAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLA 422
            T G+++Y+         P +  S P+ L       LR  ++ P   EAVM++R S GL ++ Y          +++L A+D  ++ +  F HD +K +EGS    Q ALLYT    GQR +R+ NL LP  S +S +FR AD++  +   +KQA     + PL +VREQ T  C+++L+ YR+ CA  S  GQLILPE+LKLLPLY LAL+KS  LR +     R++ +       R+A+L   L+ P      + YPR+  +  +    DD +     + L   S+E + DDG++LL+       YVG  V       LF  S    +       L L    +D++ ++++++ E     R  Y         +++ +   G PS   F+  +V+D+     SYVE+L  VH+QIQ ++A
Sbjct:  401 TGGQVYYY--------YPFSVLSDPAKL----YNDLRWNISRPQGFEAVMRVRCSQGLQVQEYSGNFCKRIPSDIDLPAIDCDKTIMVTFKHD-DKFQEGSECAFQCALLYTTV-YGQRRIRIINLSLPCTSMLSNLFRSADLDTQFTCFLKQAANGIPASPLFQVREQTTNLCINILHSYRKFCATVSSSGQLILPEALKLLPLYTLALVKSIGLRNDGWLDDRSYWVS------RSASLSIPLAVP------LVYPRMISIHDLASKEDDGSLLSATIPL---SSEHINDDGIYLLENGEDGLFYVGNMVNPDTLQQLFGVS----SVDGVPTQLVLQQFDNDLSKKLIDVVNET-RRQRCSY---------LRLRLCRKGDPSALFFLSYMVEDKTPGGLSYVEFLVHVHRQIQTKMA 778          
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|1002875344|ref|XP_006663994.2| (PREDICTED: protein transport protein Sec24-like CEF [Oryza brachyantha])

HSP 1 Score: 197.208 bits (500), Expect = 3.707e-52
Identity = 138/423 (32.62%), Postives = 219/423 (51.77%), Query Frame = 0
Query:    2 TAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSD--MAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLA 422
            T GR++Y+         P +A S P+ L       LR  ++ P   E+VM++R S GL ++ Y          +++L A+D  ++ +  F HD +K++E S    Q ALLYT    GQR +RV NL LP  + +S +FRYAD+E  +  +VKQA     S PL +VR+Q+T  C+++L  YR+ CA+ S  GQLILPE+LKLLPLY LAL+KS  LR       R++ +        A+++   L+ P      + +PR+  +  +    DD +     L LN   +E+ +D G++LL+     ++YVG  V       +F  S        AG    L +E  D  ++ +V +++ E+    R  Y         +++ +   G PS   F  +LV+D+     SYVE+L  VH+QIQ+++ 
Sbjct:  441 TGGRVYYY--------YPFSALSDPAKL----FNDLRWNISRPQGFESVMRVRCSQGLQVQDYTGNFCRRVPTDIDLPAIDSDKTIMVTFKHD-DKLQENSECAFQCALLYTTV-YGQRRIRVINLSLPCTNVLSNLFRYADLETQFTYVVKQAANAIPSTPLSQVRDQVTNTCINILQSYRKHCASVSSSGQLILPEALKLLPLYTLALIKSVGLRTEGRLDDRSYWV------SIASSISVLLAIP------LVFPRMIALHDLTSRSDDDSLIPTPLTLN---SENTLDSGIYLLENGEDGFVYVGNAVNPATLEQIFGVSS------LAGAPNLLVLEQYDNELSRKVNDVVNEI-RRQRCSY---------LRLRLCKHGDPSGDFFRSLLVEDKAPGGLSYVEFLVHVHRQIQSKMT 818          
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|1032654241|gb|OAQ35509.1| (hypothetical protein K457DRAFT_66010 [Mortierella elongata AG-77])

HSP 1 Score: 195.667 bits (496), Expect = 1.033e-51
Identity = 139/430 (32.33%), Postives = 201/430 (46.74%), Query Frame = 0
Query:    1 MTAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLY------EVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLAGR 424
            +T G  H FP       +PA  A         F   L   +A P    A+M++R S GL +  +     +  S +LELA +D  ++F     HDG K+ E      Q+ALLYT    G R VRVHN   P  + +  VFR+ADM+     L K A+ Q  S+PL  VRE LT  CV +L  YR+ CA+S+ PGQLILPES KL PLYAL LLKS +LR          G+ D  +D+R   +    S      +   YPR+       E VGV G      G +    L   S   L   G +LL+     +L++GRD+ +     +F  S   E          +  +TS+    +   ++E            +G    + +V  G G   E  F+ +L +D+  +  SYV+YLC +H++IQ  ++ +
Sbjct:  410 ITGGESHMFPN-----FNPARDAV-------KFKGNLAKLVARPFGYNALMRVRCSTGLRITEHFGNFHMKNSTDLELAGIDSEKAFGVLVKHDG-KLDEKVEASFQVALLYTTAD-GLRRVRVHNFSTPVTTLLGNVFRWADMDTTINFLAKGAIAQGLSKPLNEVREALTEKCVKILSSYRKNCASSTAPGQLILPESYKLFPLYALTLLKSKSLR---------SGI-DMNSDIRVHHMRMLRSMGVSESIAFFYPRMVPVFDMEEKVGVRG----PTGRVLFPPLVRVSVARLNPAGAYLLENGQCMFLWLGRDIPSNYLMDVFGVSTLDEVDPSLRHLPEIESQTSNQLRTLAAYMQE-----------QRGKYLNLVIVRQGRGQHEEPEFLSLLAEDKNNDAMSYVDYLCAIHRKIQTEVSTK 800          
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|1183497172|gb|ORZ20824.1| (hypothetical protein BCR41DRAFT_303272 [Lobosporangium transversale])

HSP 1 Score: 196.052 bits (497), Expect = 1.072e-51
Identity = 124/388 (31.96%), Postives = 189/388 (48.71%), Query Frame = 0
Query:   41 LASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRL---YEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPS-EAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLAGR 424
            L  P    A++++R S GL +  +     +  S +LE+  LD  ++F     HDG K+ E + V  Q+ALLYT    G R VRVHN   P  + +  VFR+ADM+     L K A+ Q  ++PL  VR+ +T  CV +L  YR+ CA+S+ PGQLILPES KL P+Y+L LLKS +LR          G  D  +D+R   +    S      +   YPR+   +E+    G ++ T G + L  L   S   L   G +LL+     YL++GRD+  +    +F  S       E   +L    E +      L  +    D  RS Y         + +++   G    E  F  +L++D+  +  SYV+YLC +H+ IQ  ++ +
Sbjct:  498 LGRPFGYNALLRVRCSTGLRITEHFGNFHMKNSTDLEIGGLDSEKAFGVLVKHDG-KLDEKTEVSFQVALLYTTAD-GYRRVRVHNFSTPVTTLLGNVFRWADMDTTINFLSKGAISQGLTKPLNEVRDTMTDKCVKILSAYRKNCASSTAPGQLILPESFKLFPVYSLTLLKSKSLR----------GGNDINSDIRVHQMRMLKSMGVSESIAFLYPRMIPVHEMDEKVGVKNLTTGRVYLPPLIRVSYARLNSSGAYLLENAQSLYLWLGRDINPQFLQDVFGVS----TLDEVDSSLQYLPELNSRTSSQLRTIVSYMDSQRSKY---------LNLIIVRQGRDQIELEFSNLLMEDKNNDAMSYVDYLCAIHRMIQTEVSSK 860          
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|672180172|ref|XP_008810269.1| (PREDICTED: protein transport protein Sec24-like At4g32640 isoform X1 [Phoenix dactylifera])

HSP 1 Score: 197.208 bits (500), Expect = 1.099e-51
Identity = 136/421 (32.30%), Postives = 214/421 (50.83%), Query Frame = 0
Query:    2 TAGRLHYFPGPVASPTSPAAAASLPSSLTPTFLTALRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLA 422
            T G+++Y+         P +  S P+ L       LR  ++ P   EAVM++R S GL ++ Y          +++L A+D  ++ +  F HD +K +EGS    Q ALLYT    GQR +R+ NL LP  S +S +FR AD++  +   +KQA     + PL +VREQ T  C+++L+ YR+ CA  S  GQLILPE+LKLLPLY LAL+KS  LR +     R++ +       R+A+L   L+ P      + YPR+  +  +    DD +     + L   S+E + DDG++LL+       YVG  V       LF  S    +       L L    +D++ ++++++ E     R  Y         +++ +   G PS   F+  +V+D+     SYVE+L  VH+QIQ ++A
Sbjct:  744 TGGQVYYY--------YPFSVLSDPAKL----YNDLRWNISRPQGFEAVMRVRCSQGLQVQEYSGNFCKRIPSDIDLPAIDCDKTIMVTFKHD-DKFQEGSECAFQCALLYTTV-YGQRRIRIINLSLPCTSMLSNLFRSADLDTQFTCFLKQAANGIPASPLFQVREQTTNLCINILHSYRKFCATVSSSGQLILPEALKLLPLYTLALVKSIGLRNDGWLDDRSYWV------SRSASLSIPLAVP------LVYPRMISIHDLASKEDDGSLLSATIPL---SSEHINDDGIYLLENGEDGLFYVGNMVNPDTLQQLFGVS----SVDGVPTQLVLQQFDNDLSKKLIDVVNE-TRRQRCSY---------LRLRLCRKGDPSALFFLSYMVEDKTPGGLSYVEFLVHVHRQIQTKMA 1121          
BLAST of EWM21682.1 vs. NCBI_GenBank
Match: gi|672180174|ref|XP_008810270.1| (PREDICTED: protein transport protein Sec24-like At4g32640 isoform X2 [Phoenix dactylifera])

HSP 1 Score: 197.208 bits (500), Expect = 1.138e-51
Identity = 129/386 (33.42%), Postives = 201/386 (52.07%), Query Frame = 0
Query:   37 LRNALASPLAQEAVMKIRSSVGLSLKHYVAPGIIHPSEELELAALDPSQSFVAEFLHDGEKIKEGSRVYLQLALLYTQGGTGQRMVRVHNLQLPTASAVSGVFRYADMEAIYATLVKQAVWQAWSEPLVRVREQLTRACVDMLYQYRQLCAASSPPGQLILPESLKLLPLYALALLKSDALRVNPPEAGRAHGLPDPTADVRAATLHAFLSAPAKHLVHMTYPRLYEVVGVGGGRDDTAGSMGLLRLNGCSAESLIDDGVFLLDAWNQTYLYVGRDVGTRVWTGLFNRSGPPENAHEAGCTLALAVETSDMAGRVLELLEELCDGDRSGYGVGKGAVPAMQVVVAGSGSPSEAHFIKMLVDDRQKNEQSYVEYLCLVHKQIQNRLA 422
            LR  ++ P   EAVM++R S GL ++ Y          +++L A+D  ++ +  F HD +K +EGS    Q ALLYT    GQR +R+ NL LP  S +S +FR AD++  +   +KQA     + PL +VREQ T  C+++L+ YR+ CA  S  GQLILPE+LKLLPLY LAL+KS  LR +     R++ +       R+A+L   L+ P      + YPR+  +  +    DD +     + L   S+E + DDG++LL+       YVG  V       LF  S    +       L L    +D++ ++++++ E     R  Y         +++ +   G PS   F+  +V+D+     SYVE+L  VH+QIQ ++A
Sbjct:  743 LRWNISRPQGFEAVMRVRCSQGLQVQEYSGNFCKRIPSDIDLPAIDCDKTIMVTFKHD-DKFQEGSECAFQCALLYTTV-YGQRRIRIINLSLPCTSMLSNLFRSADLDTQFTCFLKQAANGIPASPLFQVREQTTNLCINILHSYRKFCATVSSSGQLILPEALKLLPLYTLALVKSIGLRNDGWLDDRSYWV------SRSASLSIPLAVP------LVYPRMISIHDLASKEDDGSLLSATIPL---SSEHINDDGIYLLENGEDGLFYVGNMVNPDTLQQLFGVS----SVDGVPTQLVLQQFDNDLSKKLIDVVNE-TRRQRCSY---------LRLRLCRKGDPSALFFLSYMVEDKTPGGLSYVEFLVHVHRQIQTKMA 1097          
The following BLAST results are available for this feature:
BLAST of EWM21682.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101959|gb|EWM21682.1|0.000e+0100.00sec23/sec24 transport protein [Nannochloropsis gad... [more]
gi|553192768|ref|XP_005855642.1|0.000e+0100.00sec24-like transport protein, partial [Nannochloro... [more]
gi|298710495|emb|CBJ25559.1|6.852e-5935.75sec23/sec24 transport protein-related [Ectocarpus ... [more]
gi|970660570|gb|KUF98107.1|3.912e-5333.78Transmembrane protein 18 [Phytophthora nicotianae][more]
gi|672180177|ref|XP_008810271.1|6.152e-5332.30PREDICTED: protein transport protein Sec24-like At... [more]
gi|1002875344|ref|XP_006663994.2|3.707e-5232.62PREDICTED: protein transport protein Sec24-like CE... [more]
gi|1032654241|gb|OAQ35509.1|1.033e-5132.33hypothetical protein K457DRAFT_66010 [Mortierella ... [more]
gi|1183497172|gb|ORZ20824.1|1.072e-5131.96hypothetical protein BCR41DRAFT_303272 [Lobosporan... [more]
gi|672180172|ref|XP_008810269.1|1.099e-5132.30PREDICTED: protein transport protein Sec24-like At... [more]
gi|672180174|ref|XP_008810270.1|1.138e-5133.42PREDICTED: protein transport protein Sec24-like At... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9021rna9021Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications