rna9019, rna9019 (mRNA) Nannochloropsis gaditana

Overview
Namerna9019
Unique Namerna9019
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length721
Alignment locationKK037251.1:118084..119138 +

Link to JBrowse

Properties
Property NameValue
Productglutamate-cysteine ligase
Orig transcript idgnl|cribi|Naga_101376g2.10435.mrna
Orig protein idgnl|cribi|Naga_101376g2.10435
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:118084..119138 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101376g2gene8745Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9019rna9019-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21684.1cds8989Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9019 ID=rna9019|Name=rna9019|organism=Nannochloropsis gaditana|type=mRNA|length=721bp
GCCGTGGGACACCTGCCAATGGATGTGTCGAATGATGGTTTGCGGTCGCG
CCCCCGCAGTCGTTGACCATTTTGTTCCGCCTTCTTCCCTCATTCCCTTC
CTCCCTCACTCCCTCCCTCCCTCCCTCCCTTCCTCCCTTCCTTCTTTCCA
GGTACGTCCGCTCTGAGATCCTTCTGGCAGGGAACATTATGCGGCCCCAC
CCCTCTGACCCGAACAAGACACTCCTAGTCACCCTCACCCACATCAACCC
CGGCGGCTCCATCGATTCCAAAGCAGGCGCCCTCATGGTCAACAAGCTCT
CCAGCACAAGTCCTGTCTCCTTCGTTCGGAAGATCGAATTTGCGGCCCGG
AAAGGGTGGGACGAGATGGAGGAAGGGCGTGAGGGATGGCGAGGTCGGTG
GGTCGAGAGGGTGATGTGGAGGGATCGTGAAAGGGTGATGCGGAGCCACG
ACAGACAGATCGGTGATCCGGGCAAGGTCAAGAAGATTCTCGGTGTGGAG
CCCGTGGAGAAAAGGAGGACGGAGATGCAAAGTTTGGAATGGGAAAGGTT
GATGACGGTGGTGTGAGAGGCGGGGGGCTGAAATCAAGGAGGAAAACGGC
GTGGAGGGGAGGAGGAAGTGTACCCGGAAAATGGAGGGTTAGACATGTAA
GATAGGGATCGAAAGAAATGATGCACTGGCTCACGTAAGCTTCCAGCTTA
TTTGGATGTCCTTTTTGTGGT
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protein sequence of rna9019

>rna9019-protein ID=rna9019-protein|Name=rna9019|organism=Nannochloropsis gaditana|type=polypeptide|length=157bp
MTQTASCRPPLWSTGLFLVCTRCSRDQNVPVPKRRPAGTTSSRPRRASVL
SLLPLLFLLLLLTTGRTQAGLLKVGRPLFWPSSLPHLRPVRRAGVRQFLN
IYHRLKDIQQDDLLWGEEVEYGILKVDRSKRRVWLSLRGKEVMESLIKKE
KDYTQRW
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mRNA from alignment at KK037251.1:118084..119138+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9019 ID=rna9019|Name=rna9019|organism=Nannochloropsis gaditana|type=mRNA|length=1055bp|location=Sequence derived from alignment at KK037251.1:118084..119138+ (Nannochloropsis gaditana)
TGCTGCAGCCCTCCCAGCGTATACCGGTGTAAAAGGACGTGCACCCACAA
ATAACTTGCGGCTTTGGCGATCCTGCGGTGTCAGCAATTGGAGATACAAA
CGCAGAGGAAGCCACATCTACAGCATTCGTATTGGCATGACCGCACCTGC
CTAAAGGGGAAGCCCGACGTTGCAGGGGGCAGGACGGCGACCCCATTGAG
GGACAGCAGATAGGGCCGTACATAGTCGCACAGGGGTGCAACAAGGGGTG
AAAATGACGCAAACAGCATCATGCAGACCACCATTATGGTCCACGGGCCT
ATTCCTGGTGTGTACACGATGCAGCAGGGACCAAAACGTGCCTGTGCCAA
AACGACGGCCAGCGGGCACGACCTCGTCCCGTCCACGCAGGGcttccgtc
ctctccctccttcctctccttttccttctcctcctcctcaccaccgGCCG
CACACAAGCAGGGTTATTGAAGGTGACTGTCTTATATTTCTCGCTCGCAC
GTTGCGGGATGTGGTGGGGCTTTTTGGGGCGCATCGTCCACCCAGCCTGT
GAcgtcatccccccccctccctccctccttccctccctccctcccccggt
gcAGGTGGGCCGGCCTCTTTTCTggccttcttccctgcctcaTCTTCGTC
CTGTGCGACGCGCGGGCGTGCGTCAATTTTTGAACATCTACCACCGTCTG
AAAGACATCCAGCAAGACGACCTcctgtggggggaggaggttgagtACGG
AATTttgaaggtgaggaggagggaagggagggagaaaggaagcaagAGTA
GGTGACAAGGAAATGGGGATGATTGTGTGGCTCAGAGTCGCAaacgaaag
ggaggaaaggcagctcccaggcctccataaaaggcaggagaggaggaggg
gagggagggatggagagggaaagtgtGACGGGTGGCTGACTGCTTGGTTC
CAAAACAGGTGGATAGGTCTAAGCGGCGTGTCTGGCTGTCGCTgcggggc
aaggaggtgatggagagTCTgatcaagaaggagaaagactACACCCAACG
GTGGG
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Coding sequence (CDS) from alignment at KK037251.1:118084..119138+

>rna9019 ID=rna9019|Name=rna9019|organism=Nannochloropsis gaditana|type=CDS|length=1416bp|location=Sequence derived from alignment at KK037251.1:118084..119138+ (Nannochloropsis gaditana)
ATGACGCAAACAGCATCATGCAGACCACCATTATGGTCCACGGGCCTATT
CCTGGTGTGTACACGATGCAGCAGGGACCAAAACGTGCCTGTGCCAAAAC
GACGGCCAGCGGGCACGACCTCGTCCCGTCCACGCAGGGcttccgtcctc
tccctccttcctctccttttccttctcctcctcctcaccaccgGCCGCAC
ACAAGCAGGGTTATTGAAGGTGGGCCGGCCTCTTTTCTggccttcttccc
tgcctcaTCTTCGTCCTGTGCGACGCGCGGGCGTGCGTCAATTTTTGAAC
ATCTACCACCGTCTGAAAGACATCCAGCAAGACGACCTcctgtgggggga
ggaggttgagtACGGAATTttgaagGTGGATAGGTCTAAGCGGCGTGTCT
GGCTGTCGCTgcggggcaaggaggtgatggagagTCTgatcaagaaggag
aaagactACACCCAACGGTGGGATGACGCAAACAGCATCATGCAGACCAC
CATTATGGTCCACGGGCCTATTCCTGGTGTGTACACGATGCAGCAGGGAC
CAAAACGTGCCTGTGCCAAAACGACGGCCAGCGGGCACGACCTCGTCCCG
TCCACGCAGGGcttccgtcctctccctccttcctctccttttccttctcc
tcctcctcaccaccgGCCGCACACAAGCAGGGTTATTGAAGGTGGGCCGG
CCTCTTTTCTggccttcttccctgcctcaTCTTCGTCCTGTGCGACGCGC
GGGCGTGCGTCAATTTTTGAACATCTACCACCGTCTGAAAGACATCCAGC
AAGACGACCTcctgtggggggaggaggttgagtACGGAATTttgaagGTG
GATAGGTCTAAGCGGCGTGTCTGGCTGTCGCTgcggggcaaggaggtgat
ggagagTCTgatcaagaaggagaaagactACACCCAACGGTGGGATGACG
CAAACAGCATCATGCAGACCACCATTATGGTCCACGGGCCTATTCCTGGT
GTGTACACGATGCAGCAGGGACCAAAACGTGCCTGTGCCAAAACGACGGC
CAGCGGGCACGACCTCGTCCCGTCCACGCAGGGcttccgtcctctccctc
cttcctctccttttccttctcctcctcctcaccaccgGCCGCACACAAGC
AGGGTTATTGAAGGTGGGCCGGCCTCTTTTCTggccttcttccctgcctc
aTCTTCGTCCTGTGCGACGCGCGGGCGTGCGTCAATTTTTGAACATCTAC
CACCGTCTGAAAGACATCCAGCAAGACGACCTcctgtggggggaggaggt
tgagtACGGAATTttgaagGTGGATAGGTCTAAGCGGCGTGTCTGGCTGT
CGCTgcggggcaaggaggtgatggagagTCTgatcaagaaggagaaagac
tACACCCAACGGTGGG
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Synonyms
Publications