rna9012, rna9012 (mRNA) Nannochloropsis gaditana

Overview
Namerna9012
Unique Namerna9012
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1206
Alignment locationKK037251.1:105018..105950 +

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Properties
Property NameValue
Productcamphor resistance protein
Orig transcript idgnl|cribi|Naga_101206g1.10498.mrna
Orig protein idgnl|cribi|Naga_101206g1.10498
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:105018..105950 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101206g1gene8738Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9012rna9012-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21691.1cds8982Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9012 ID=rna9012|Name=rna9012|organism=Nannochloropsis gaditana|type=mRNA|length=1206bp
ATGCGACTGCGGAATGGCAAGCCAGGTGCTGTCACCAGCACCTTCAGACC
CCGCAAGTTCAGGGTTCACCCTGTCCTTCTCCTCCCCTTTCTAAGCATCT
ACCTCGTCCATGTCAATGCCGTCGCCTACATTCCTTTGACACAAGCACAC
GAAGGCATTGGCGTGGCCACCGAGGTGTTGGCCATCAGCTCACGAACAGA
AGGCAAAGAAATACGGTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCGTCCTTCTCTTCTTCTTCTTCCTCCTCTTCTTCCTCCTCTTCC
TCCATGCGTCTACGTAGTGTTTCTCCGACGGAAAGAAACAAAGGGGACGG
AGCGGCCGTCGCGGTGTACCACCCAATCACGACGTTGGATCCCAGGTTGA
CGGCCTATTTCGCCACGCTCACTTTCGAAGGGGGCCAAGCACTACGCTTG
TTGGTGGACACGGGCAGCCCCGCCCTCCTCTTGCCCGTTGCCCCTTCGCC
CTCCTTAGGCCGAGTATCACAACGAGCCTCGGTCGTGGAGGTGGGGCCTC
CCTCGTTTCAACCTCTGGTAACCCCTGCGTCCGTGGCGGGCGGGCGGGAG
GGCGGGGGAAGGATTACCACACGCCTCAACCATACCTTAGCTCAGGCGAC
TGTTTTGGCCTGTGAAGACCAGCGATGCCAAGGTCGATGTCACTCTCCCG
ACGAATCTCATTTCTGTGGTCCTCACGGAGGGTCCTGCCGGAAATCACCC
GTCCTCTCTCCCTCCCTCCCTGTCTCCTTCCCTCCCTCCCTCTACGGGGA
TAAGAAACGGAGGGAGGAAAGGGGGAAGGACGCGGAGGAACAAGCGATGG
AAAGCTTGCCTGAGAATCAGTGCTTCTTTAATTGGACCTTCGGGGCGGGC
TTGTATGCGAGCGAGGCGTCAGGCGTGCTGATGACAGGCACGGTCTCTCT
GGGGCCACTCCAGGTGGAGGAAGTCGTCTTTGGCGGAATTCTCCATGCGT
CCCTCGGTTTTTACCCGGCCCCCACCGCCGCGGGGATTCTCGGACTTTCT
TTCGGGAACAATTCCCTGTGCGGCTCGGAGTTTTCCTGGTTGTAGGAGGG
GAAAGGGGACTCATGTACGTGCCATTGGTCCCGCCCTTTGCGCACTATTG
GGTACAAGTCGAGGATTTCCGGGTGGCCGGAGTGTCCTTGGTGGGGAGGA
TCGAGG
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protein sequence of rna9012

>rna9012-protein ID=rna9012-protein|Name=rna9012|organism=Nannochloropsis gaditana|type=polypeptide|length=144bp
MFPGISIYHSRTHLTTFPFPPCVDPFRGGPGPSRARLPRASSYPLEFSTS
LMLFHLRHTGLWLDGMAIGSGAVCGALLRYGAVKVQERTKCAPWAIPCIN
VAGSFVLSALSVSTQVDPRFRLMLGVGFCGEGGGGRGGGGGRGP
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mRNA from alignment at KK037251.1:105018..105950+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9012 ID=rna9012|Name=rna9012|organism=Nannochloropsis gaditana|type=mRNA|length=933bp|location=Sequence derived from alignment at KK037251.1:105018..105950+ (Nannochloropsis gaditana)
GGCCTCGTGCGGTGGGTTGTAATTTTGGGCCAGGGGATGAAGAAAACTGG
GGTAAGTAGCGGGAGCCGTcagggaggagctggaagCCACAGCCGCATTA
CACTTGTGCCTCGATTTAATCCTCAGTAAATAAGTTTTAGACCGGGTGTT
GGACATGGACATCCTGTAAAATCTTGGGGGTCGAAGCGGATGCTCCCGAG
GTGGTTTTCGGGTGTGTTTGTTGCTTCTTTGCGAGGTTTTTGTCGCAGGT
GTGCGTCTGCCTTGTCAATAACTGTTGGCTTTGACCTTCAGTTTTTCGTT
TATCTTTGCAGTTGCCCGTGTCACGCATTCAGTCCCACCGCGAACTCTGC
CGCTTAAGTTGTTTTGGGGGGTTTTAATGCGACAAGGCCCGTGCCCGGCA
TCGTGTTGAGCCAAGCCTCTGACCATGCCCCCGGGGGGTAAGAATATGCC
TGGAATCTGGCCTGTTTTCTAAGCCCATGCACATCCTAAAGGCACAATCT
ACATGTTTCCCGGCATTTCTATCTATCATTCACGCACACATCTCACGACG
TTTCCATTTCCACCCTGCGTAGACCCTTTCCGTGGGGGACCAGGACCCTC
CAgagcccgccttccccgtgCGTCCTCCTACCCACTGGAATTCTCCACAT
CCCTTATGCTTTTCCACCTCCGACACACGGGCTTGTGGCTAGACGGGATG
GCCATCGGGTCCGGGGCGGTGTGCGGGGCCTTGTTGCGGTACGGCGCCGT
CAAAGTCCAAGAGCGGACAAAGTGTGCCCCATGGGCCATCCCCTGTATCA
ACGTTGCAGGCTCGTTCGTTTTAAGCGCCCTGTCCGTCAGCACGCAGGTG
GACCCACGCTTCCGCCTCATGCTAGGGGTGGGCTTCTGcggtgagggggg
gggcggtcgtgggggaggaggggggagggggcc
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Coding sequence (CDS) from alignment at KK037251.1:105018..105950+

>rna9012 ID=rna9012|Name=rna9012|organism=Nannochloropsis gaditana|type=CDS|length=431bp|location=Sequence derived from alignment at KK037251.1:105018..105950+ (Nannochloropsis gaditana)
ATGTTTCCCGGCATTTCTATCTATCATTCACGCACACATCTCACGACGTT
TCCATTTCCACCCTGCGTAGACCCTTTCCGTGGGGGACCAGGACCCTCCA
gagcccgccttccccgtgCGTCCTCCTACCCACTGGAATTCTCCACATCC
CTTATGCTTTTCCACCTCCGACACACGGGCTTGTGGCTAGACGGGATGGC
CATCGGGTCCGGGGCGGTGTGCGGGGCCTTGTTGCGGTACGGCGCCGTCA
AAGTCCAAGAGCGGACAAAGTGTGCCCCATGGGCCATCCCCTGTATCAAC
GTTGCAGGCTCGTTCGTTTTAAGCGCCCTGTCCGTCAGCACGCAGGTGGA
CCCACGCTTCCGCCTCATGCTAGGGGTGGGCTTCTGcggtgagggggggg
gcggtcgtgggggaggaggggggagggggcc
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Synonyms
Publications