EWM21691.1, cds8982 (CDS) Nannochloropsis gaditana

Overview
NameEWM21691.1
Unique Namecds8982
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:105520..105950 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21691.1
Productcamphor resistance protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101206g1.10498.mrna
GbkeyCDS
End range.
End range105950
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:105520..105950 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR003691CrcB
Homology
[Close]
BLAST of EWM21691.1 vs. NCBI_GenBank
Match: gi|585101978|gb|EWM21691.1| (camphor resistance protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 288.115 bits (736), Expect = 1.943e-98
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 
Query:    1 MFPGISIYHSRTHLTTFPFPPCVDPFRGGPGPSRARLPRASSYPLEFSTSLMLFHLRHTGLWLDGMAIGSGAVCGALLRYGAVKVQERTKCAPWAIPCINVAGSFVLSALSVSTQVDPRFRLMLGVGFCGEGGGGRGGGGGRGP 144
            MFPGISIYHSRTHLTTFPFPPCVDPFRGGPGPSRARLPRASSYPLEFSTSLMLFHLRHTGLWLDGMAIGSGAVCGALLRYGAVKVQERTKCAPWAIPCINVAGSFVLSALSVSTQVDPRFRLMLGVGFCGEGGGGRGGGGGRGP
Sbjct:    1 MFPGISIYHSRTHLTTFPFPPCVDPFRGGPGPSRARLPRASSYPLEFSTSLMLFHLRHTGLWLDGMAIGSGAVCGALLRYGAVKVQERTKCAPWAIPCINVAGSFVLSALSVSTQVDPRFRLMLGVGFCGEGGGGRGGGGGRGP 144
The following BLAST results are available for this feature:
BLAST of EWM21691.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101978|gb|EWM21691.1|1.943e-98100.00camphor resistance protein, partial [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9012rna9012Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications