rna9007, rna9007 (mRNA) Nannochloropsis gaditana

Overview
Namerna9007
Unique Namerna9007
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1195
Alignment locationKK037251.1:94991..95409 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100723g3.5248.mrna
Orig protein idgnl|cribi|Naga_100723g3.5248
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:94991..95409 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100723g3gene8733Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9007rna9007-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21696.1cds8977Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9007 ID=rna9007|Name=rna9007|organism=Nannochloropsis gaditana|type=mRNA|length=1195bp
ACGTGCAATTGTCGTGCAGGTGCGCGGGTTTTCCCAGCCACTTGGCCCTG
TATGTGTCGGAAATCCTTTTTAGGGGGGGCGCTTGACTCATCGGTCGTCG
TGTTCGGCAAAGTCTGGCCTGTGTCGATCAGTACCAGCACCCAAGTGCAA
TCGGTGCAATCCCACCCTGTCGCAGCCAAGTGGCCTTTGCCAATGGCTTG
CACCCGACTCGGATAGCACTCGGTGCCTGTCGAAGTGATGGTAGGAATGG
TGCTTTGGCCCTTGATGGGTTTTTATTACATGCACGGTGGTCTCTTTTGC
CTAGGAAGAACAAGGGAGGGCCGGGACCCCTCTGTGCTGATGTCCGCATG
ATGCCTGTCTCTCGGTATCTTGTCACGTCCATGGACACTAACGCCACTGT
CCATGGGCCTTGACAAGGTGTGCGAGTCGTGCGGGACTTTTCATCGTAAT
AAGACGCAATACTGGCCATTGGCTGGCGTAGTCTGGGAGCGTCTCGCATC
TGTCTCTACCAGTGCCCTGACAACTCTTTTCCTCCCTCTTCCTTCCCGAA
ACAGCAAAAACAACACTTCGACGCCCACAGCGAAGGAACTAAGACCCGCA
GGAGACGCAGCATTCCACGCCGCTACCCGCATCGTCAAGTTCCTCGTCTA
TCGTACTAAGTGCACGACCCAAAAGCAAATGGCCACCCCTGTAACGGCGA
CCAGAAACGCATCGAAAAACTCCTTTGCCTGCTTCCCCTTCAAATTTCTG
TTCGGGGGCGACAAAGACAGTAGCAACGGCTTGAAAAAAAAGGACCTCAA
GAACGGTAAAGGCATGCACAAGCCCGGGGACGGCGGGCACGGGATCGCCA
CCTCCGACACGGCGACCGCCTCCTATGAAGGGGGTTCCTCCATGATGAGC
GTGGACGGAGAGGGGACCAAGACGACAGGCTCCGGGACCCAGCATCCCAC
CACGGAGGGTGGATTTGGCGTGGCGGTGAACGCGGAGGGCGTGCGGACCA
TTGCCGGTTACGAAATTCGGGACACCTTGGGCAAAGGCATGAGTGGGAAA
GTGAAGCGGGGCTACAACACCAGCAGGTAGGGAGGGCGGATGGTGGGTTC
TGGGGGCGCAAACTACTCGTGTGTAACGGTCTTTCCCCTAGACAGCCTCC
CACACTCATGAACCCCTTCCCTTTTCTCCCTCCCTCCCTCCCTCC
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protein sequence of rna9007

>rna9007-protein ID=rna9007-protein|Name=rna9007|organism=Nannochloropsis gaditana|type=polypeptide|length=103bp
MTVLTRRAAIDWRFVENLPWSSAPQKHHAHSRQLPSTSSVLVRPFFFRFG
RADLICVATNILNLHTPASRGDMKGSQEPPAGIPRGSFQPVCVSQSYFSY
CAM
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mRNA from alignment at KK037251.1:94991..95409-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9007 ID=rna9007|Name=rna9007|organism=Nannochloropsis gaditana|type=mRNA|length=419bp|location=Sequence derived from alignment at KK037251.1:94991..95409- (Nannochloropsis gaditana)
ATGACTGTGTACATATGAATCTTGGTTTTTTATTAACATATCTCTTCTGA
CACCATTTTCTCGACATAAACCAGCTTGACACGCAGAGCTGCGATTGACT
GGCGCTTTGTTGAAAACTTGCCTTGGTCCTCCGCCCCGCAAAAGCACCAC
GCCCACAGCCGGCAACTTCCAAGCACGTCGTCGGTGCTTGTCCGTCCCTT
TTTTTTTCGCTTCGGACGGGCCGATCTGAGTCATTGTTGTGCACATAAAA
GCATCTATAGACTTGCTTAGTATGCGTTGCCACCAACATCCTCAATTTAC
ACACGCCCGCGTCAAGAGGAGACATGAAAGGGAGCCAGGAACCCCCCGCC
GGCATTCCGCGTGGTTCATTTCAGCCCGTTTGTGTGTCGCAGTCCTATTT
TTCGTACTGTGCAATGTAG
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Coding sequence (CDS) from alignment at KK037251.1:94991..95409-

>rna9007 ID=rna9007|Name=rna9007|organism=Nannochloropsis gaditana|type=CDS|length=936bp|location=Sequence derived from alignment at KK037251.1:94991..95409- (Nannochloropsis gaditana)
TATGCGTTGCCACCAACATCCTCAATTTACACACGCCCGCGTCAAGAGGA
GACATGAAAGGGAGCCAGGAACCCCCCGCCGGCATTCCGCGTGGTTCATT
TCAGCCCGTTTGTGTGTCGCAGTCCTATTTTTCGTACTGTGCAATGTAGC
TTGACACGCAGAGCTGCGATTGACTGGCGCTTTGTTGAAAACTTGCCTTG
GTCCTCCGCCCCGCAAAAGCACCACGCCCACAGCCGGCAACTTCCAAGCA
CGTCGTCGGTGCTTGTCCGTCCCTTTTTTTTTCGCTTCGGACGGGCCGAT
CTGAATGACTGTTATGCGTTGCCACCAACATCCTCAATTTACACACGCCC
GCGTCAAGAGGAGACATGAAAGGGAGCCAGGAACCCCCCGCCGGCATTCC
GCGTGGTTCATTTCAGCCCGTTTGTGTGTCGCAGTCCTATTTTTCGTACT
GTGCAATGTAGCTTGACACGCAGAGCTGCGATTGACTGGCGCTTTGTTGA
AAACTTGCCTTGGTCCTCCGCCCCGCAAAAGCACCACGCCCACAGCCGGC
AACTTCCAAGCACGTCGTCGGTGCTTGTCCGTCCCTTTTTTTTTCGCTTC
GGACGGGCCGATCTGAATGACTGTTATGCGTTGCCACCAACATCCTCAAT
TTACACACGCCCGCGTCAAGAGGAGACATGAAAGGGAGCCAGGAACCCCC
CGCCGGCATTCCGCGTGGTTCATTTCAGCCCGTTTGTGTGTCGCAGTCCT
ATTTTTCGTACTGTGCAATGTAGCTTGACACGCAGAGCTGCGATTGACTG
GCGCTTTGTTGAAAACTTGCCTTGGTCCTCCGCCCCGCAAAAGCACCACG
CCCACAGCCGGCAACTTCCAAGCACGTCGTCGGTGCTTGTCCGTCCCTTT
TTTTTTCGCTTCGGACGGGCCGATCTGAATGACTGT
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Synonyms
Publications