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Properties
| Property Name | Value |
|---|
| Product | Zn(2)-C6 fungal-type DNA-binding domain protein |
| Orig transcript id | gnl|cribi|Naga_100091g7.5714.mrna |
| Orig protein id | gnl|cribi|Naga_100091g7.5714 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:24578..26996 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9 ID=rna9|Name=rna9|organism=Nannochloropsis gaditana|type=mRNA|length=1543bp
GATTAGTGCGCGGAATGTGGGAACAGGAAGAAACAGCAAGTGGATTAATT
ATATTCCTATGGCAATTCATTGCACGTCAAAACCCGCCACGTACCATGCT
TTCGCCGTCGTCGTTCTTGCTCGCCGATTCACGTCGGAACGCTAATAACC
GCACGAATGTTCAATAACCACTTGACACCGTTCAAAATTCGTGAACTTAA
AAGTATAAATACATCATAAATCGTAGATGCTTCTTGCTTCCGTCCGCCGC
GCCACCTCAAAGCATGTACGTTCCCCTCATAAGATGCTGAGCATCCTACC
GTGACGCCTAATTTGCCAACATGAAAAACTCTTTTCACCCCACATTCAAA
GACCAAAGAATAAGTAGATACATTTAAAATACTTTTTTCCTATGATCTAT
ATGTACATTTTTATTTGAACACTTACCCAACACTTTCCTTTGTTATTTAT
CTGCACGACTCTCCTCTCGTTATTTTGTTTTTTGCAGGGAGCCGAGGCTG
CCGCCATGCTGGCAGTTGCCGGTGCGACCATGGGGACGCTCGTGATGTCC
GCTCAGAGCGAAGCAGTGTGCTCCAATCCAGCATGTGAGGCAGCTTACGA
GCATGTGCGCAATGGACGGCCCTTTCCCATTGCGTTTGCTGCCATAGCAC
GCGCCCTTCGGAGGGGGCACGTAGTAGTTATAGATCCGGTAATGAGCGAT
CAGGAGCTTCTCGCCGCCCAAAATGATGTCAAGGCCTTACTACGACAAGG
TGATGGTGCGTTTGCAGTGAACGCAAATGACGACAGCAGCGTGCGGCTTG
ACTCCGTTACATGGGTGACAGGGGAAGAGGCGGGGACTGGTCCGGGCCTG
AAGCACGCAGTGGCCTTGTTGAAAGGTCTGGCGCATGAATTCTCAAGGAC
CCCCGAGTACAGTAAGAGTGTCTTATTTGTGCAGTCTGCGGCGCAACTAG
CGTGCTATGCTGGGGACGGCCAAGCTTTTTATGCACCGCACCTGGATGCT
TCTACAGAGAGTGTATGGACACTGGGACTTAATGCTTGGCTCCGTGCGCG
CGCCTACCGTGAGAGAACGATCACGGCTATTCTTTACTTGAATGACAAAG
ATTGGGATGCAGATCTGTCTGGTGGATGTTTGCGATGCTATCTGCCTTCC
GCTCTTGCCCAGGGAGGGATGCATGACAAGCCTAGCGGTCTTGGCGAGCT
TCCTGCGACAACTACCTCTGGCTCAAGAAGGATAAGTCAAGACAGAAGTA
AACCCAAAGCCCATGCCTACGAGATATGTGGAGACCATGGCATTACTGCA
CTACCGGTCTCTTTAGAATCAGATCGGGCAAAGAGCGACGACAAGGTGAG
CGGGTCTCTCGGCGTTATGCCGCGAGACGTGGCGCCACGGGGGGGGCGTC
TGGTCCTCTTCGACAGCGGAGCTGTCCTCCACGAGGTCCTACCCTCTTAT
AAAAAGGGTGGACAGCGCATAGCTTTGACTGTGTGGGTGAGCGACCGACA
AAGCCGAGAATTCGTTCAAAATAAATAAAATCCGGACTTGCCT back to topprotein sequence of rna9 >rna9-protein ID=rna9-protein|Name=rna9|organism=Nannochloropsis gaditana|type=polypeptide|length=642bp
MEVVNVNRNKEQAHKMAASHLDDRKIPRDDSPPQLMLLNPRSLMHQTEDN
TITGNTKTRGTACMRCRKLKVHCTGSLPCLRCFHLSLVCRPQVPRPYKGN
DSAEDCRCPSEKVKRARGSKHSSCTGVRKRGGDQRNKKDVEDALAIAMRA
ETDRTILLELIFDRMDPRPLAGIYLDSIMEVKTWDEKSKAALSTLRTSWF
ANLIRTWWLHSTVVGADTSWGMAREVALLLNFSPIDFEDTERLHLDYPLS
VMRKQSEKFRDFVANGMLQIQQHPAFKALLAEVPPSTAIHLTCNTPNGLM
LEVTNDAFDTYFRGADRMYNDIVLRKTMPCILYLGLVSPEDRREWTRFMI
EAVSKGPLNANGEWRKTQIFKLVCTEGNIQLFLVKARFLPSVGTGSVAIT
LEPCPRSNHVTKIAGSTLKDGRKDEGKCLTTEIIRKSVSPSVHIMSEAAQ
IQEGVTGRSSESSSQDAQQKVSQSVRDDAFLLPGVATIPVGATPGMYERQ
ADVEAVFGRKDSPSSAVVPSFGSGDDGAARWIQAVELTMSQAEKEQVGRK
LLRAPFSDGLAPTDLAGGPSSSIGHSMDSCSSGTVSITSTLSTSTQCGQQ
YEALENANSGLVPECAADWDSEPPVFDATLLDVVFEDGAEGT back to topmRNA from alignment at CM002455.1:24578..26996- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9 ID=rna9|Name=rna9|organism=Nannochloropsis gaditana|type=mRNA|length=2419bp|location=Sequence derived from alignment at CM002455.1:24578..26996- (Nannochloropsis gaditana)
CATTTTCGTGGTTGGCAGGAACGACCTAACATTCCACGAACTGTTTTCGG
CCCCCTTCGTAGAACCCGGTCGTCATAGAGATGGATATGTATTGATGGGA
CAGAGGTCTTCCATGTGCTCTTCATAAATCTCAACACCTTTGTGGTTCAC
TGTTTGTATGGCTAACGGATGTTTTTAAGAACCCCGTATATCTGAGGTGT
CAGCCGTGGGTCCTGGAAAATCAGGCGATGCTTTAAACATAACCCGCGCC
TCAAACTCAAAACTTTCTTCACGCCCGGTTTCCCAGCCATACATGGAAGT
TGTGAATGTAAACAGAAATAAAGAACAAGCGCACAAGATGGCAGCGAGTC
ATCTAGACGACCGAAAGATTCCGCGTGATGACTCACCGCCGCAGCTAATG
CTTCTCAATCCGCGGTCCCTCATGCACCAAACGGAGGACAATACGATTAC
TGGCAACACGAAAACTCGCGGCACCGCATGCATGCGCTGTCGTAAGCTTA
AAGTTCATTGCACGGGCTCGCTTCCTTGGTAAGTTGGGAATCTGAGAATC
TTTGACTACCAAAGAAGTCAGAGTACAGCTGATGTCTCGTAGATTAGTAT
GAGAGAGATCTTGACACGATAATCGACTGATAGATTTCCATGTCTTACAC
CCTTGTAGTCTACGCTGCTTCCATCTCTCCCTTGTTTGCCGGCCCCAGGT
GCCCAGGCCGTACAAAGGAAACGATAGCGCCGAGGACTGCAGATGCCCAA
GTGAGAAGGTGAAGAGGGCCCGAGGCTCAAAGCACAGCAGCTGCACGGGG
GTTAGAAAACGTGGAGGGGATCAACGGAACAAAAAGGACGTCGAAGACGC
ACTGGCGATAGCCATGCGTGCTGAGACTGATCGAACTATCTTGCTAGAAC
TCATCTTCGACCGCATGGACCCCAGACCTCTGGCTGGCATCTACCTCGAC
AGCATCATGGAAGTAAAAACTTGGGACGAGAAGTCGAAAGCAGCGCTATC
GACTCTCAGAACATCGTGGTTTGCGAATTTAATTCGGACCTGGTGGCTTC
ATTCGACTGTGGTGGGTGCGGACACGTCTTGGGGCATGGCGAGAGAGGTG
GCGCTTTTGCTGAATTTCTCTCCCATCGATTTCGAGGACACGGAGAGACT
GCACTTAGACTACCCTCTTTCAGTCATGAGGAAGCAGAGTGAGAAGTTCC
GAGACTTCGTTGCGAACGGCATGCTACAAATTCAGCAGCATCCTGCTTTC
AAGGCCCTCTTGGCGGAAGTCCCTCCTAGCACTGCAATTCACTTAACTTG
CAACACTCCCAATGGATTGATGTTGGAAGTGACCAACGACGCGTTTGACA
CTTATTTCCGAGGTGCTGACCGCATGTACAACGATATAGTATTGCGCAAG
ACAATGCCGTGTATCCTCTACCTTGGTCTGGTCTCTCCCGAGGACAGACG
TGAGTGGACCCGTTTCATGATCGAGGCCGTTTCCAAAGGGCCTTTAAATG
CAAATGGAGAATGGCGAAAAACCCAAATTTTCAAACTCGTGTGCACAGAA
GGCAATATTCAACTTTTTTTGGTGAAGGCAAGATTCTTACCATCAGTGGG
AACGGGATCTGTTGCCATCACACTCGAGCCTTGTCCCAGGTCGAACCACG
TGACGAAAATCGCCGGCTCCACCTTAAAGGATGGCCGGAAAGACGAAGGT
AAATGCCTGACGACAGAAATAATTAGGAAAAGCGTTTCGCCCAGCGTGCA
TATAATGTCTGAGGCGGCGCAAATTCAGGAAGGGGTAACTGGAAGAAGCA
GCGAATCGTCTTCACAAGACGCGCAACAGAAAGTAAGCCAGTCAGTGAGA
GATGATGCCTTTTTATTGCCGGGGGTGGCCACGATACCCGTTGGTGCGAC
CCCTGGCATGTATGAACGTCAGGCAGACGTAGAGGCTGTCTTTGGGCGGA
AGGACAGTCCTTCCTCTGCTGTCGTTCCTTCTTTTGGCAGTGGAGACGAT
GGAGCAGCGCGTTGGATACAAGCTGTGGAGTTGACTATGAGCCAAGCTGA
GAAGGAGCAGGTGGGACGCAAACTGCTCAGAGCGCCGTTCTCGGACGGTT
TGGCGCCGACGGATTTGGCTGGGGGTCCCTCCTCGTCTATTGGGCACAGC
ATGGATTCATGTTCCTCCGGAACCGTATCTATCACCTCCACCTTGTCCAC
CAGCACGCAATGCGGGCAGCAATACGAGGCGCTTGAAAACGCGAACTCGG
GTCTGGTGCCTGAGTGTGCGGCCGACTGGGACAGCGAGCCCCCGGTCTTT
GATGCAACCTTGCTAGATGTCGTTTTCGAGGACGGTGCGGAAGGAACGTA
AATGCCACAGGATGGAGCATGAGCTAGTCGGTTTTCATGTGGAATGAAAC
AATTGAACTGTAAGTAGAT back to topCoding sequence (CDS) from alignment at CM002455.1:24578..26996- >rna9 ID=rna9|Name=rna9|organism=Nannochloropsis gaditana|type=CDS|length=3858bp|location=Sequence derived from alignment at CM002455.1:24578..26996- (Nannochloropsis gaditana)
TCTACGCTGCTTCCATCTCTCCCTTGTTTGCCGGCCCCAGGTGCCCAGGC
CGTACAAAGGAAACGATAGCGCCGAGGACTGCAGATGCCCAAGTGAGAAG
GTGAAGAGGGCCCGAGGCTCAAAGCACAGCAGCTGCACGGGGGTTAGAAA
ACGTGGAGGGGATCAACGGAACAAAAAGGACGTCGAAGACGCACTGGCGA
TAGCCATGCGTGCTGAGACTGATCGAACTATCTTGCTAGAACTCATCTTC
GACCGCATGGACCCCAGACCTCTGGCTGGCATCTACCTCGACAGCATCAT
GGAAGTAAAAACTTGGGACGAGAAGTCGAAAGCAGCGCTATCGACTCTCA
GAACATCGTGGTTTGCGAATTTAATTCGGACCTGGTGGCTTCATTCGACT
GTGGTGGGTGCGGACACGTCTTGGGGCATGGCGAGAGAGGTGGCGCTTTT
GCTGAATTTCTCTCCCATCGATTTCGAGGACACGGAGAGACTGCACTTAG
ACTACCCTCTTTCAGTCATGAGGAAGCAGAGTGAGAAGTTCCGAGACTTC
GTTGCGAACGGCATGCTACAAATTCAGCAGCATCCTGCTTTCAAGGCCCT
CTTGGCGGAAGTCCCTCCTAGCACTGCAATTCACTTAACTTGCAACACTC
CCAATGGATTGATGTTGGAAGTGACCAACGACGCGTTTGACACTTATTTC
CGAGGTGCTGACCGCATGTACAACGATATAGTATTGCGCAAGACAATGCC
GTGTATCCTCTACCTTGGTCTGGTCTCTCCCGAGGACAGACGTGAGTGGA
CCCGTTTCATGATCGAGGCCGTTTCCAAAGGGCCTTTAAATGCAAATGGA
GAATGGCGAAAAACCCAAATTTTCAAACTCGTGTGCACAGAAGGCAATAT
TCAACTTTTTTTGGTGAAGGCAAGATTCTTACCATCAGTGGGAACGGGAT
CTGTTGCCATCACACTCGAGCCTTGTCCCAGGTCGAACCACGTGACGAAA
ATCGCCGGCTCCACCTTAAAGGATGGCCGGAAAGACGAAGGTAAATGCCT
GACGACAGAAATAATTAGGAAAAGCGTTTCGCCCAGCGTGCATATAATGT
CTGAGGCGGCGCAAATTCAGGAAGGGGTAACTGGAAGAAGCAGCGAATCG
TCTTCACAAGACGCGCAACAGAAAGTAAGCCAGTCAGTGAGAGATGATGC
CTTTTTATTGCCGGGGGTGGCCACGATACCCGTTGGTGCGACCCCTGGCA
TGTATGAACGTCAGGCAGACGTAGAGGCTGTCTTTGGGCGGAAGGACAGT
CCTTCCTCTGCTGTCGTTCCTTCTTTTGGCAGTGGAGACGATGGAGCAGC
GCGTTGGATACAAGCTGTGGAGTTGACTATGAGCCAAGCTGAGAAGGAGC
AGGTGGGACGCAAACTGCTCAGAGCGCCGTTCTCGGACGGTTTGGCGCCG
ACGGATTTGGCTGGGGGTCCCTCCTCGTCTATTGGGCACAGCATGGATTC
ATGTTCCTCCGGAACCGTATCTATCACCTCCACCTTGTCCACCAGCACGC
AATGCGGGCAGCAATACGAGGCGCTTGAAAACGCGAACTCGGGTCTGGTG
CCTGAGTGTGCGGCCGACTGGGACAGCGAGCCCCCGGTCTTTGATGCAAC
CTTGCTAGATGTCGTTTTCGAGGACGGTGCGGAAGGAACGTAAATGGAAG
TTGTGAATGTAAACAGAAATAAAGAACAAGCGCACAAGATGGCAGCGAGT
CATCTAGACGACCGAAAGATTCCGCGTGATGACTCACCGCCGCAGCTAAT
GCTTCTCAATCCGCGGTCCCTCATGCACCAAACGGAGGACAATACGATTA
CTGGCAACACGAAAACTCGCGGCACCGCATGCATGCGCTGTCGTAAGCTT
AAAGTTCATTGCACGGGCTCGCTTCCTTGTCTACGCTGCTTCCATCTCTC
CCTTGTTTGCCGGCCCCAGGTGCCCAGGCCGTACAAAGGAAACGATAGCG
CCGAGGACTGCAGATGCCCAAGTGAGAAGGTGAAGAGGGCCCGAGGCTCA
AAGCACAGCAGCTGCACGGGGGTTAGAAAACGTGGAGGGGATCAACGGAA
CAAAAAGGACGTCGAAGACGCACTGGCGATAGCCATGCGTGCTGAGACTG
ATCGAACTATCTTGCTAGAACTCATCTTCGACCGCATGGACCCCAGACCT
CTGGCTGGCATCTACCTCGACAGCATCATGGAAGTAAAAACTTGGGACGA
GAAGTCGAAAGCAGCGCTATCGACTCTCAGAACATCGTGGTTTGCGAATT
TAATTCGGACCTGGTGGCTTCATTCGACTGTGGTGGGTGCGGACACGTCT
TGGGGCATGGCGAGAGAGGTGGCGCTTTTGCTGAATTTCTCTCCCATCGA
TTTCGAGGACACGGAGAGACTGCACTTAGACTACCCTCTTTCAGTCATGA
GGAAGCAGAGTGAGAAGTTCCGAGACTTCGTTGCGAACGGCATGCTACAA
ATTCAGCAGCATCCTGCTTTCAAGGCCCTCTTGGCGGAAGTCCCTCCTAG
CACTGCAATTCACTTAACTTGCAACACTCCCAATGGATTGATGTTGGAAG
TGACCAACGACGCGTTTGACACTTATTTCCGAGGTGCTGACCGCATGTAC
AACGATATAGTATTGCGCAAGACAATGCCGTGTATCCTCTACCTTGGTCT
GGTCTCTCCCGAGGACAGACGTGAGTGGACCCGTTTCATGATCGAGGCCG
TTTCCAAAGGGCCTTTAAATGCAAATGGAGAATGGCGAAAAACCCAAATT
TTCAAACTCGTGTGCACAGAAGGCAATATTCAACTTTTTTTGGTGAAGGC
AAGATTCTTACCATCAGTGGGAACGGGATCTGTTGCCATCACACTCGAGC
CTTGTCCCAGGTCGAACCACGTGACGAAAATCGCCGGCTCCACCTTAAAG
GATGGCCGGAAAGACGAAGGTAAATGCCTGACGACAGAAATAATTAGGAA
AAGCGTTTCGCCCAGCGTGCATATAATGTCTGAGGCGGCGCAAATTCAGG
AAGGGGTAACTGGAAGAAGCAGCGAATCGTCTTCACAAGACGCGCAACAG
AAAGTAAGCCAGTCAGTGAGAGATGATGCCTTTTTATTGCCGGGGGTGGC
CACGATACCCGTTGGTGCGACCCCTGGCATGTATGAACGTCAGGCAGACG
TAGAGGCTGTCTTTGGGCGGAAGGACAGTCCTTCCTCTGCTGTCGTTCCT
TCTTTTGGCAGTGGAGACGATGGAGCAGCGCGTTGGATACAAGCTGTGGA
GTTGACTATGAGCCAAGCTGAGAAGGAGCAGGTGGGACGCAAACTGCTCA
GAGCGCCGTTCTCGGACGGTTTGGCGCCGACGGATTTGGCTGGGGGTCCC
TCCTCGTCTATTGGGCACAGCATGGATTCATGTTCCTCCGGAACCGTATC
TATCACCTCCACCTTGTCCACCAGCACGCAATGCGGGCAGCAATACGAGG
CGCTTGAAAACGCGAACTCGGGTCTGGTGCCTGAGTGTGCGGCCGACTGG
GACAGCGAGCCCCCGGTCTTTGATGCAACCTTGCTAGATGTCGTTTTCGA
GGACGGTGCGGAAGGAACGTAAATGGAAGTTGTGAATGTAAACAGAAATA
AAGAACAAGCGCACAAGATGGCAGCGAGTCATCTAGACGACCGAAAGATT
CCGCGTGATGACTCACCGCCGCAGCTAATGCTTCTCAATCCGCGGTCCCT
CATGCACCAAACGGAGGACAATACGATTACTGGCAACACGAAAACTCGCG
GCACCGCATGCATGCGCTGTCGTAAGCTTAAAGTTCATTGCACGGGCTCG
CTTCCTTG back to top
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