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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100775g1.7633.mrna |
| Orig protein id | gnl|cribi|Naga_100775g1.7633 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:39413..41120 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8994 ID=rna8994|Name=rna8994|organism=Nannochloropsis gaditana|type=mRNA|length=479bp
TCTCGTCAACATTACCATCATGCTCACGCCAGCCGCGCAGGAACAAGCGG
ATCGATACGCCGACTTCTTCGCAGACGTCGGTCCCAAAGGCCGCTTCCAC
AACGTGAACCTGCTCAGGCTGGAGCCGGTTGCGCTGGAGACGGGCTTGGA
CCGGACGCACGAGATGCTCATGAAGGACATATTGACAGAGGCCTCGAAGA
AGGGAGAGTTCGCCTACGACCTGATCGTGGTGGGGTACCTGCCCTCTGTC
TGGGAGAACGAGCGGAGCAGCTCCAATTTTCTGGGAACAGCGGCCGGGAG
CAACATGAGCAGCGCCGCTCCATCCCGTAGCAGGTGAGGGATGGGGGGAG
GAAGGAAGAAAGGGATGGGAAAGGAAGGGAGGAAGGGGATGGGGAAAGAA
GATGACAGAGGAGCTTGGATGGATGTTTTCGACCTCTTGTTGTCGATCGA
GGTTTCAATATTATACCCTCCGTCTCACA back to topprotein sequence of rna8994 >rna8994-protein ID=rna8994-protein|Name=rna8994|organism=Nannochloropsis gaditana|type=polypeptide|length=305bp
MGHHRPCPRYPQSQGNHSPSPAVAEESAGSGGRDRHHSYASYSPTAAVLR
GVADKVQRFGEGVRNSTLSRNFSSNKLHKDGADAREREGGRESSTSRADR
RDSSNVHPGSTSSLNALPSLDSHHHKHHKGVQEFGVIGEELYSRMDIEAF
LMIVRGFQPAEPATTSTSSVKLERPTALRAAAAAAVASSKTVPPALGLGG
GGGGLEGGREGGREAGSSLPPLSKATFQPPSPMPTALSVKIRSVVASEEG
KAGGGKEESKGTGAAGDPETVLARRRREEDGETEDRRRPGGMRDGINGAG
HEGRL back to topmRNA from alignment at KK037251.1:39413..41120+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8994 ID=rna8994|Name=rna8994|organism=Nannochloropsis gaditana|type=mRNA|length=1708bp|location=Sequence derived from alignment at KK037251.1:39413..41120+ (Nannochloropsis gaditana)
ATGGGACACCACCGGCCTTGTCCCCGTTACCCCCAAAGTCAAGGGAATCA
GTCTCTGCGCCTCAcattcctcccccagcgGTCCTTCCCCGAAAGAAAGA
GTCGcactgccctccttctcccccttccttttcacgCTCGCCCTCTCATC
TCACTGCCCGCTcgtccgcccctctcctccccgggctGGGCGATGATGCC
CCGCCCaccatttttcttccctgacgcgactttccttcccccttcttcct
tctccacagctcgccctctcctgccgtggccgaggagagcgcggggagcg
gagggcgggaccgTCATCACAGCTATGCTTCCTACTCCCCGACGGCGGCG
GTTTTGCGCGGGGTAGCCGATAAAGTGCAGCGTTTCGGAGAGGGCGTCAG
GtacggagggcgggagggagagggagaggaaacgcGAAGGGTTAGTTTTG
GGTTATCTGTTTAAGGAGGGGGGTATGCTGGAGGGGTAGGAGGcgcggtg
gaaggaggagttggagaCGGCGAGGGGTTGTCTTTGCTCACGTTTCATCC
TCGTTGTCACTCCTGATGCAGGAACTCGAcgctttcgcgcaatttttcct
cAAACAAGCTCCACAAAGATGGGGCCGACgcccgggagagggaaggaggg
agggagagcagcaCGAGTCGGGCCGACCGACGCGACAGCAGCAACGTCCA
TCCGGGGAGCACGTCCTCCCTGAACGCCTTGCCATCTCTAGactcccacc
accacaaGCATCACAAGGGTATATCCGTGGcttgttcctcctttcccttc
cttccttcctccgttttctcccttttcttccacctgctcctGGCTTCTTG
CGACCTgagcctctccccttctccttgacAGGCGTCCAGGAATTCGGCGT
GATCGGGGAAGAGCTGTACTCCCGGATGGACATTGAGGCCTTCCTGATGA
TCGTGCGCGGATTCCAGCCCGCAGGTGcgcgggcggaagggagggggggc
gaggtcCAAGTCGCCTGGGGCAGGGCGTAAGCGGGTTGGAGACAAGAGCA
GTGGTGTGTTCGCTGGGGCGCATTCTAGGGACTGACAGCATTTCCCTTCc
taccctttcccctccgtcccctcccttcctccctccttccctccttcgtt
ttgccctcccccacagAACCCGCCACCACGAGCACTAGCAGTGTCAAACT
TGAGAGGCCCACAGCATTGCgcgccgctgctgccgctgcggtcgcttcct
ccaaaaCAGTCCCTCCAGCTCTGGGACtagggggaggcggaggaggattg
gagggagggagggaggggggaagggaagcagggagcaGCCTTCCACCCTT
GTCCAAGGCTACCTTTCAGCCACCGTCCCCAATGTGAGTGCAAGGAAgag
taggagggagggcgaggagggaggcgttgaGCGTGAAAGCTTGCAGGAAT
ACACCGGGTCTAAAATTGTTCCCTCTTCTCACGGACAGGCCCACGGCCTT
ATCCGTGAAAATCCGGAGTGTGGTGGCGtccgaggagggaaaggcggggg
gagggaaagaggagtcgAAAGGGACGGGAGCTGCCGGGGACCCCGAGACC
GTGCtggcgagaagaagaagagaggaagacggagagacggaggacagGCG
GAGACCAGGCGGCATGCGTGATGGGATCAATGGGGCGGGCCACGAAGGGA
GGTTGTGA back to topCoding sequence (CDS) from alignment at KK037251.1:39413..41120+ >rna8994 ID=rna8994|Name=rna8994|organism=Nannochloropsis gaditana|type=CDS|length=5508bp|location=Sequence derived from alignment at KK037251.1:39413..41120+ (Nannochloropsis gaditana)
ATGGGACACCACCGGCCTTGTCCCCGTTACCCCCAAAGTCAAGGGAATCA
ctcgccctctcctgccgtggccgaggagagcgcggggagcggagggcggg
accgTCATCACAGCTATGCTTCCTACTCCCCGACGGCGGCGGTTTTGCGC
GGGGTAGCCGATAAAGTGCAGCGTTTCGGAGAGGGCGTCAGGAACTCGAc
gctttcgcgcaatttttcctcAAACAAGCTCCACAAAGATGGGGCCGACg
cccgggagagggaaggagggagggagagcagcaCGAGTCGGGCCGACCGA
CGCGACAGCAGCAACGTCCATCCGGGGAGCACGTCCTCCCTGAACGCCTT
GCCATCTCTAGactcccaccaccacaaGCATCACAAGGGCGTCCAGGAAT
TCGGCGTGATCGGGGAAGAGCTGTACTCCCGGATGGACATTGAGGCCTTC
CTGATGATCGTGCGCGGATTCCAGCCCGCAGAACCCGCCACCACGAGCAC
TAGCAGTGTCAAACTTGAGAGGCCCACAGCATTGCgcgccgctgctgccg
ctgcggtcgcttcctccaaaaCAGTCCCTCCAGCTCTGGGACtaggggga
ggcggaggaggattggagggagggagggaggggggaagggaagcagggag
caGCCTTCCACCCTTGTCCAAGGCTACCTTTCAGCCACCGTCCCCAATGC
CCACGGCCTTATCCGTGAAAATCCGGAGTGTGGTGGCGtccgaggaggga
aaggcggggggagggaaagaggagtcgAAAGGGACGGGAGCTGCCGGGGA
CCCCGAGACCGTGCtggcgagaagaagaagagaggaagacggagagacgg
aggacagGCGGAGACCAGGCGGCATGCGTGATGGGATCAATGGGGCGGGC
CACGAAGGGAGGTTGTGAATGGGACACCACCGGCCTTGTCCCCGTTACCC
CCAAAGTCAAGGGAATCActcgccctctcctgccgtggccgaggagagcg
cggggagcggagggcgggaccgTCATCACAGCTATGCTTCCTACTCCCCG
ACGGCGGCGGTTTTGCGCGGGGTAGCCGATAAAGTGCAGCGTTTCGGAGA
GGGCGTCAGGAACTCGAcgctttcgcgcaatttttcctcAAACAAGCTCC
ACAAAGATGGGGCCGACgcccgggagagggaaggagggagggagagcagc
aCGAGTCGGGCCGACCGACGCGACAGCAGCAACGTCCATCCGGGGAGCAC
GTCCTCCCTGAACGCCTTGCCATCTCTAGactcccaccaccacaaGCATC
ACAAGGGCGTCCAGGAATTCGGCGTGATCGGGGAAGAGCTGTACTCCCGG
ATGGACATTGAGGCCTTCCTGATGATCGTGCGCGGATTCCAGCCCGCAGA
ACCCGCCACCACGAGCACTAGCAGTGTCAAACTTGAGAGGCCCACAGCAT
TGCgcgccgctgctgccgctgcggtcgcttcctccaaaaCAGTCCCTCCA
GCTCTGGGACtagggggaggcggaggaggattggagggagggagggaggg
gggaagggaagcagggagcaGCCTTCCACCCTTGTCCAAGGCTACCTTTC
AGCCACCGTCCCCAATGCCCACGGCCTTATCCGTGAAAATCCGGAGTGTG
GTGGCGtccgaggagggaaaggcggggggagggaaagaggagtcgAAAGG
GACGGGAGCTGCCGGGGACCCCGAGACCGTGCtggcgagaagaagaagag
aggaagacggagagacggaggacagGCGGAGACCAGGCGGCATGCGTGAT
GGGATCAATGGGGCGGGCCACGAAGGGAGGTTGTGAATGGGACACCACCG
GCCTTGTCCCCGTTACCCCCAAAGTCAAGGGAATCActcgccctctcctg
ccgtggccgaggagagcgcggggagcggagggcgggaccgTCATCACAGC
TATGCTTCCTACTCCCCGACGGCGGCGGTTTTGCGCGGGGTAGCCGATAA
AGTGCAGCGTTTCGGAGAGGGCGTCAGGAACTCGAcgctttcgcgcaatt
tttcctcAAACAAGCTCCACAAAGATGGGGCCGACgcccgggagagggaa
ggagggagggagagcagcaCGAGTCGGGCCGACCGACGCGACAGCAGCAA
CGTCCATCCGGGGAGCACGTCCTCCCTGAACGCCTTGCCATCTCTAGact
cccaccaccacaaGCATCACAAGGGCGTCCAGGAATTCGGCGTGATCGGG
GAAGAGCTGTACTCCCGGATGGACATTGAGGCCTTCCTGATGATCGTGCG
CGGATTCCAGCCCGCAGAACCCGCCACCACGAGCACTAGCAGTGTCAAAC
TTGAGAGGCCCACAGCATTGCgcgccgctgctgccgctgcggtcgcttcc
tccaaaaCAGTCCCTCCAGCTCTGGGACtagggggaggcggaggaggatt
ggagggagggagggaggggggaagggaagcagggagcaGCCTTCCACCCT
TGTCCAAGGCTACCTTTCAGCCACCGTCCCCAATGCCCACGGCCTTATCC
GTGAAAATCCGGAGTGTGGTGGCGtccgaggagggaaaggcggggggagg
gaaagaggagtcgAAAGGGACGGGAGCTGCCGGGGACCCCGAGACCGTGC
tggcgagaagaagaagagaggaagacggagagacggaggacagGCGGAGA
CCAGGCGGCATGCGTGATGGGATCAATGGGGCGGGCCACGAAGGGAGGTT
GTGAATGGGACACCACCGGCCTTGTCCCCGTTACCCCCAAAGTCAAGGGA
ATCActcgccctctcctgccgtggccgaggagagcgcggggagcggaggg
cgggaccgTCATCACAGCTATGCTTCCTACTCCCCGACGGCGGCGGTTTT
GCGCGGGGTAGCCGATAAAGTGCAGCGTTTCGGAGAGGGCGTCAGGAACT
CGAcgctttcgcgcaatttttcctcAAACAAGCTCCACAAAGATGGGGCC
GACgcccgggagagggaaggagggagggagagcagcaCGAGTCGGGCCGA
CCGACGCGACAGCAGCAACGTCCATCCGGGGAGCACGTCCTCCCTGAACG
CCTTGCCATCTCTAGactcccaccaccacaaGCATCACAAGGGCGTCCAG
GAATTCGGCGTGATCGGGGAAGAGCTGTACTCCCGGATGGACATTGAGGC
CTTCCTGATGATCGTGCGCGGATTCCAGCCCGCAGAACCCGCCACCACGA
GCACTAGCAGTGTCAAACTTGAGAGGCCCACAGCATTGCgcgccgctgct
gccgctgcggtcgcttcctccaaaaCAGTCCCTCCAGCTCTGGGACtagg
gggaggcggaggaggattggagggagggagggaggggggaagggaagcag
ggagcaGCCTTCCACCCTTGTCCAAGGCTACCTTTCAGCCACCGTCCCCA
ATGCCCACGGCCTTATCCGTGAAAATCCGGAGTGTGGTGGCGtccgagga
gggaaaggcggggggagggaaagaggagtcgAAAGGGACGGGAGCTGCCG
GGGACCCCGAGACCGTGCtggcgagaagaagaagagaggaagacggagag
acggaggacagGCGGAGACCAGGCGGCATGCGTGATGGGATCAATGGGGC
GGGCCACGAAGGGAGGTTGTGAATGGGACACCACCGGCCTTGTCCCCGTT
ACCCCCAAAGTCAAGGGAATCActcgccctctcctgccgtggccgaggag
agcgcggggagcggagggcgggaccgTCATCACAGCTATGCTTCCTACTC
CCCGACGGCGGCGGTTTTGCGCGGGGTAGCCGATAAAGTGCAGCGTTTCG
GAGAGGGCGTCAGGAACTCGAcgctttcgcgcaatttttcctcAAACAAG
CTCCACAAAGATGGGGCCGACgcccgggagagggaaggagggagggagag
cagcaCGAGTCGGGCCGACCGACGCGACAGCAGCAACGTCCATCCGGGGA
GCACGTCCTCCCTGAACGCCTTGCCATCTCTAGactcccaccaccacaaG
CATCACAAGGGCGTCCAGGAATTCGGCGTGATCGGGGAAGAGCTGTACTC
CCGGATGGACATTGAGGCCTTCCTGATGATCGTGCGCGGATTCCAGCCCG
CAGAACCCGCCACCACGAGCACTAGCAGTGTCAAACTTGAGAGGCCCACA
GCATTGCgcgccgctgctgccgctgcggtcgcttcctccaaaaCAGTCCC
TCCAGCTCTGGGACtagggggaggcggaggaggattggagggagggaggg
aggggggaagggaagcagggagcaGCCTTCCACCCTTGTCCAAGGCTACC
TTTCAGCCACCGTCCCCAATGCCCACGGCCTTATCCGTGAAAATCCGGAG
TGTGGTGGCGtccgaggagggaaaggcggggggagggaaagaggagtcgA
AAGGGACGGGAGCTGCCGGGGACCCCGAGACCGTGCtggcgagaagaaga
agagaggaagacggagagacggaggacagGCGGAGACCAGGCGGCATGCG
TGATGGGATCAATGGGGCGGGCCACGAAGGGAGGTTGTGAATGGGACACC
ACCGGCCTTGTCCCCGTTACCCCCAAAGTCAAGGGAATCActcgccctct
cctgccgtggccgaggagagcgcggggagcggagggcgggaccgTCATCA
CAGCTATGCTTCCTACTCCCCGACGGCGGCGGTTTTGCGCGGGGTAGCCG
ATAAAGTGCAGCGTTTCGGAGAGGGCGTCAGGAACTCGAcgctttcgcgc
aatttttcctcAAACAAGCTCCACAAAGATGGGGCCGACgcccgggagag
ggaaggagggagggagagcagcaCGAGTCGGGCCGACCGACGCGACAGCA
GCAACGTCCATCCGGGGAGCACGTCCTCCCTGAACGCCTTGCCATCTCTA
GactcccaccaccacaaGCATCACAAGGGCGTCCAGGAATTCGGCGTGAT
CGGGGAAGAGCTGTACTCCCGGATGGACATTGAGGCCTTCCTGATGATCG
TGCGCGGATTCCAGCCCGCAGAACCCGCCACCACGAGCACTAGCAGTGTC
AAACTTGAGAGGCCCACAGCATTGCgcgccgctgctgccgctgcggtcgc
ttcctccaaaaCAGTCCCTCCAGCTCTGGGACtagggggaggcggaggag
gattggagggagggagggaggggggaagggaagcagggagcaGCCTTCCA
CCCTTGTCCAAGGCTACCTTTCAGCCACCGTCCCCAATGCCCACGGCCTT
ATCCGTGAAAATCCGGAGTGTGGTGGCGtccgaggagggaaaggcggggg
gagggaaagaggagtcgAAAGGGACGGGAGCTGCCGGGGACCCCGAGACC
GTGCtggcgagaagaagaagagaggaagacggagagacggaggacagGCG
GAGACCAGGCGGCATGCGTGATGGGATCAATGGGGCGGGCCACGAAGGGA
GGTTGTGA back to top
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