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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100183g6.8961.mrna |
| Orig protein id | gnl|cribi|Naga_100183g6.8961 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:23963..25952 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8989 ID=rna8989|Name=rna8989|organism=Nannochloropsis gaditana|type=mRNA|length=468bp
ATGCCTCGGCGCCTGCTCGAGCGCTTGTGGAGAACGAAGCACCGGGAGCG
AAGCTTGCTGGGGAGAGGTGCAAGGGGCTGGGAGCGCAGGATCGGGCTCC
TTGTATTTGTGGTAAAAGCGACCACACATGGCCCACCAAGACTCCTCCGG
CAACAGCCAGACGTTCTCGAGACCTCGCATGGACGTGAGCAAGCGCCCAG
CAATGACAAGCAGGCGGACAGTCCAAGTGGGAACATGGAGTGCAGCCTCC
TGATACGAAGTCAAGGCTTCCAGGATGGATTTGGCGACTACTTTCTGCTT
GACGCGGCTCTCTTCATGACCAGAGCACAGCTGCGCATGAACTGCCAGGG
CTTTCAAGTACATGCGGGCGGCAACCGAATTTGTGGAGGGCGAGGAAGAA
GGAGACGAGCACCCAGGCCTACATTGTTTCTGTTTTCGCCGAAGATGTTC
AATGCTGCCCTTTGCTAG back to topprotein sequence of rna8989 >rna8989-protein ID=rna8989-protein|Name=rna8989|organism=Nannochloropsis gaditana|type=polypeptide|length=298bp
MDTCAPSSTPLRQKKVSPVAVTEAEETRLLRTLALCTAGILLLDIWSWIW
PGVLGGSEMHAASDFDPSSFFYLLPITLHVMAGLWFFTSKQHPPLPFWRR
VVCLRLFSFLCLALAVPALIARVVTLRTYCLLEGRVTADTTEGDVFKACT
DVRMNNTSLIAVIYAILGVCMVQALNELESLCTWRHQQQCSTAPYPRSHY
FSRPSCWATGAGSICASTQQASDDGDGHDGAEALLYHTLSASDDNRCLFG
DASMYGERTTPLLPAPVPSSLTPPPSTGHVMGSSERSAFSSYVVGSCV back to topmRNA from alignment at KK037251.1:23963..25952- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8989 ID=rna8989|Name=rna8989|organism=Nannochloropsis gaditana|type=mRNA|length=1990bp|location=Sequence derived from alignment at KK037251.1:23963..25952- (Nannochloropsis gaditana)
ATGGATACGTGCGCTCCCTCTAGTACGCCGTTGCGGCAAAAGAAAGTCTC
ACCCGTGGCAGTGACTGAGGCGGAGGAGACACGACTTTTGAGGTAAGAGA
TGATGAAATGGTGAGGGGGGAAAGCCAGAAAGTGACTGAAGGTGTCAAAA
CGACTAAATAGAAACGAAGCTGATGTACAATTTGTGCATTGTTTTTCACG
TAATACATCGCCAGCATGCAGCTTACTCAGAAACGCTTACTTTCTGGTCA
ATACTCCTCTTTTCTACAGGACTTTGGCGTTATGTACGGCAGGCATCCTT
CTCCTTGATATCTGGAGCTGGATTTGGCCGGGTGTGCTCGGAGGGTCTGA
GATGGTGCGTACGAAAATGTGACATTGTATGGGATATGTTAGAAGTGAGG
TATTACATGAATGACGCCACAGACAAGTAGGCATGCGAGTGAAATGTTCC
GTATGCACGAGAAGAACGAGAACGTCCATGCCGTGCTGTCCCTAGGATGT
TTGTCGTCTTTCTGCGCACACAGAAATGTAACTCCGCCGTCCATGTCACT
TTCATTATTCCTCTTTCCCCCAATGTGTCCCCGTGTGCTTCTCGCAGCAC
GCAGCCAGCGACTTCGACCCCTCCTCTTTCTTCTACCTGCTCCCAATCAC
CCTGCACGTCATGGCCGGACTCTGGTTCTTCACAAGGTAACACCGATGCC
TCGGGAGGAGGCTTGGGATTATGAGGACGGCGAGGGATCAGGGAGGGCCC
CAGGGCCTGTCCGCCCACGGGCAGGCCTCGGCTGAGGCGCTGACGTAGGT
TTGTTCTAGGGCTCGCCCAGACACTGTTAAAGTAGAACTCCGCCCTACAG
CACCCTAGACAAGTCTCACCTTCCTCCTCCTTTCCTATCCTTCCATTCAA
ACTCCCCGTCCCTCCCCTCCCTTCCCCTTAGCAAGCAGCATCCACCCCTC
CCTTTCTGGCGCCGCGTGGTGTGCCTTCGCCTCTTTTCCTTCCTTTGTCT
GGCCTTGGCGGTACCCGCCCTTATCGCTCGTGTGGTAACGCTGCGAACCT
ACTGTCTTTTAGAGGGCCGGGTCACGGCCGACACCACGGAGGGGGATGTC
TTCAAGGCAAGATGAGGTGGAGGCGAGGAGATATTGGGGTTGAGGGACAA
GGTAGCCTGAAATAAGGCATAAAAAGATACATCGTTGTCCTTGTTTCTCA
GTAACTTAATCGTGAGTCCCCTCGTTTCACCTGATCGGCCCCTGCCTCGT
CATTTTATTATCTAGGCCTGCACTGACGTCCGCATGAACAACACGAGCCT
GATCGCTGTGATCTACGCTATTCTAGGCGTCTGTATGGTACAGGTGGGTG
CGTAGAGGAGCTAGGGAGAGCGGTGCAGAGAAGGTGTGATGAAGCGAGAG
AACGAATGCTCGATCGGCTGCCGTGAAGGTTGTAGGATGAATGCATGGCA
CCGCCTGAAGATGCCAAGGGGCTTCAGTGGCATGCAAGACACGCCGCGCG
CTGGTCCGCGGGCGCATAGCTCCGGTCGTGCCTATCCAAATCCCCCTTTA
CGCGCGCGTTCGGTCACTCTCTCGCAACTTTTCCTTATATGAATCGAACT
TTCCTTCCACAGGCCTTAAACGAGCTGGAGAGTCTATGCACATGGCGGCA
TCAGCAACAATGCAGCACTGCGCCCTACCCACGTTCCCATTACTTTTCCC
GCCCTTCATGCTGGGCCACGGGTGCCGGGTCGATATGCGCTTCCACGCAG
CAGGCAAGTGATGACGGAGATGGCCATGATGGTGCAGAAGCTCTTTTATA
TCACACCCTTTCTGCTTCTGACGATAACCGGTGCCTGTTCGGAGACGCCT
CCATGTACGGTGAGCGCACTACCCCTCTGCTGCCGGCCCCTGTTCCATCC
TCTCTCACTCCGCCCCCATCCACGGGACATGTGATGGGAAGCAGTGAACG
TAGCGCCTTTTCTTCGTACGTTGTAGGAAGCTGTGTATAG back to topCoding sequence (CDS) from alignment at KK037251.1:23963..25952- >rna8989 ID=rna8989|Name=rna8989|organism=Nannochloropsis gaditana|type=CDS|length=5382bp|location=Sequence derived from alignment at KK037251.1:23963..25952- (Nannochloropsis gaditana)
GCCTTAAACGAGCTGGAGAGTCTATGCACATGGCGGCATCAGCAACAATG
CAGCACTGCGCCCTACCCACGTTCCCATTACTTTTCCCGCCCTTCATGCT
GGGCCACGGGTGCCGGGTCGATATGCGCTTCCACGCAGCAGGCAAGTGAT
GACGGAGATGGCCATGATGGTGCAGAAGCTCTTTTATATCACACCCTTTC
TGCTTCTGACGATAACCGGTGCCTGTTCGGAGACGCCTCCATGTACGGTG
AGCGCACTACCCCTCTGCTGCCGGCCCCTGTTCCATCCTCTCTCACTCCG
CCCCCATCCACGGGACATGTGATGGGAAGCAGTGAACGTAGCGCCTTTTC
TTCGTACGTTGTAGGAAGCTGTGTATAGGCCTGCACTGACGTCCGCATGA
ACAACACGAGCCTGATCGCTGTGATCTACGCTATTCTAGGCGTCTGTATG
GTACAGCAAGCAGCATCCACCCCTCCCTTTCTGGCGCCGCGTGGTGTGCC
TTCGCCTCTTTTCCTTCCTTTGTCTGGCCTTGGCGGTACCCGCCCTTATC
GCTCGTGTGGTAACGCTGCGAACCTACTGTCTTTTAGAGGGCCGGGTCAC
GGCCGACACCACGGAGGGGGATGTCTTCAAGCACGCAGCCAGCGACTTCG
ACCCCTCCTCTTTCTTCTACCTGCTCCCAATCACCCTGCACGTCATGGCC
GGACTCTGGTTCTTCACAAGGACTTTGGCGTTATGTACGGCAGGCATCCT
TCTCCTTGATATCTGGAGCTGGATTTGGCCGGGTGTGCTCGGAGGGTCTG
AGATGATGGATACGTGCGCTCCCTCTAGTACGCCGTTGCGGCAAAAGAAA
GTCTCACCCGTGGCAGTGACTGAGGCGGAGGAGACACGACTTTTGAGGCC
TTAAACGAGCTGGAGAGTCTATGCACATGGCGGCATCAGCAACAATGCAG
CACTGCGCCCTACCCACGTTCCCATTACTTTTCCCGCCCTTCATGCTGGG
CCACGGGTGCCGGGTCGATATGCGCTTCCACGCAGCAGGCAAGTGATGAC
GGAGATGGCCATGATGGTGCAGAAGCTCTTTTATATCACACCCTTTCTGC
TTCTGACGATAACCGGTGCCTGTTCGGAGACGCCTCCATGTACGGTGAGC
GCACTACCCCTCTGCTGCCGGCCCCTGTTCCATCCTCTCTCACTCCGCCC
CCATCCACGGGACATGTGATGGGAAGCAGTGAACGTAGCGCCTTTTCTTC
GTACGTTGTAGGAAGCTGTGTATAGGCCTGCACTGACGTCCGCATGAACA
ACACGAGCCTGATCGCTGTGATCTACGCTATTCTAGGCGTCTGTATGGTA
CAGCAAGCAGCATCCACCCCTCCCTTTCTGGCGCCGCGTGGTGTGCCTTC
GCCTCTTTTCCTTCCTTTGTCTGGCCTTGGCGGTACCCGCCCTTATCGCT
CGTGTGGTAACGCTGCGAACCTACTGTCTTTTAGAGGGCCGGGTCACGGC
CGACACCACGGAGGGGGATGTCTTCAAGCACGCAGCCAGCGACTTCGACC
CCTCCTCTTTCTTCTACCTGCTCCCAATCACCCTGCACGTCATGGCCGGA
CTCTGGTTCTTCACAAGGACTTTGGCGTTATGTACGGCAGGCATCCTTCT
CCTTGATATCTGGAGCTGGATTTGGCCGGGTGTGCTCGGAGGGTCTGAGA
TGATGGATACGTGCGCTCCCTCTAGTACGCCGTTGCGGCAAAAGAAAGTC
TCACCCGTGGCAGTGACTGAGGCGGAGGAGACACGACTTTTGAGGCCTTA
AACGAGCTGGAGAGTCTATGCACATGGCGGCATCAGCAACAATGCAGCAC
TGCGCCCTACCCACGTTCCCATTACTTTTCCCGCCCTTCATGCTGGGCCA
CGGGTGCCGGGTCGATATGCGCTTCCACGCAGCAGGCAAGTGATGACGGA
GATGGCCATGATGGTGCAGAAGCTCTTTTATATCACACCCTTTCTGCTTC
TGACGATAACCGGTGCCTGTTCGGAGACGCCTCCATGTACGGTGAGCGCA
CTACCCCTCTGCTGCCGGCCCCTGTTCCATCCTCTCTCACTCCGCCCCCA
TCCACGGGACATGTGATGGGAAGCAGTGAACGTAGCGCCTTTTCTTCGTA
CGTTGTAGGAAGCTGTGTATAGGCCTGCACTGACGTCCGCATGAACAACA
CGAGCCTGATCGCTGTGATCTACGCTATTCTAGGCGTCTGTATGGTACAG
CAAGCAGCATCCACCCCTCCCTTTCTGGCGCCGCGTGGTGTGCCTTCGCC
TCTTTTCCTTCCTTTGTCTGGCCTTGGCGGTACCCGCCCTTATCGCTCGT
GTGGTAACGCTGCGAACCTACTGTCTTTTAGAGGGCCGGGTCACGGCCGA
CACCACGGAGGGGGATGTCTTCAAGCACGCAGCCAGCGACTTCGACCCCT
CCTCTTTCTTCTACCTGCTCCCAATCACCCTGCACGTCATGGCCGGACTC
TGGTTCTTCACAAGGACTTTGGCGTTATGTACGGCAGGCATCCTTCTCCT
TGATATCTGGAGCTGGATTTGGCCGGGTGTGCTCGGAGGGTCTGAGATGA
TGGATACGTGCGCTCCCTCTAGTACGCCGTTGCGGCAAAAGAAAGTCTCA
CCCGTGGCAGTGACTGAGGCGGAGGAGACACGACTTTTGAGGCCTTAAAC
GAGCTGGAGAGTCTATGCACATGGCGGCATCAGCAACAATGCAGCACTGC
GCCCTACCCACGTTCCCATTACTTTTCCCGCCCTTCATGCTGGGCCACGG
GTGCCGGGTCGATATGCGCTTCCACGCAGCAGGCAAGTGATGACGGAGAT
GGCCATGATGGTGCAGAAGCTCTTTTATATCACACCCTTTCTGCTTCTGA
CGATAACCGGTGCCTGTTCGGAGACGCCTCCATGTACGGTGAGCGCACTA
CCCCTCTGCTGCCGGCCCCTGTTCCATCCTCTCTCACTCCGCCCCCATCC
ACGGGACATGTGATGGGAAGCAGTGAACGTAGCGCCTTTTCTTCGTACGT
TGTAGGAAGCTGTGTATAGGCCTGCACTGACGTCCGCATGAACAACACGA
GCCTGATCGCTGTGATCTACGCTATTCTAGGCGTCTGTATGGTACAGCAA
GCAGCATCCACCCCTCCCTTTCTGGCGCCGCGTGGTGTGCCTTCGCCTCT
TTTCCTTCCTTTGTCTGGCCTTGGCGGTACCCGCCCTTATCGCTCGTGTG
GTAACGCTGCGAACCTACTGTCTTTTAGAGGGCCGGGTCACGGCCGACAC
CACGGAGGGGGATGTCTTCAAGCACGCAGCCAGCGACTTCGACCCCTCCT
CTTTCTTCTACCTGCTCCCAATCACCCTGCACGTCATGGCCGGACTCTGG
TTCTTCACAAGGACTTTGGCGTTATGTACGGCAGGCATCCTTCTCCTTGA
TATCTGGAGCTGGATTTGGCCGGGTGTGCTCGGAGGGTCTGAGATGATGG
ATACGTGCGCTCCCTCTAGTACGCCGTTGCGGCAAAAGAAAGTCTCACCC
GTGGCAGTGACTGAGGCGGAGGAGACACGACTTTTGAGGCCTTAAACGAG
CTGGAGAGTCTATGCACATGGCGGCATCAGCAACAATGCAGCACTGCGCC
CTACCCACGTTCCCATTACTTTTCCCGCCCTTCATGCTGGGCCACGGGTG
CCGGGTCGATATGCGCTTCCACGCAGCAGGCAAGTGATGACGGAGATGGC
CATGATGGTGCAGAAGCTCTTTTATATCACACCCTTTCTGCTTCTGACGA
TAACCGGTGCCTGTTCGGAGACGCCTCCATGTACGGTGAGCGCACTACCC
CTCTGCTGCCGGCCCCTGTTCCATCCTCTCTCACTCCGCCCCCATCCACG
GGACATGTGATGGGAAGCAGTGAACGTAGCGCCTTTTCTTCGTACGTTGT
AGGAAGCTGTGTATAGGCCTGCACTGACGTCCGCATGAACAACACGAGCC
TGATCGCTGTGATCTACGCTATTCTAGGCGTCTGTATGGTACAGCAAGCA
GCATCCACCCCTCCCTTTCTGGCGCCGCGTGGTGTGCCTTCGCCTCTTTT
CCTTCCTTTGTCTGGCCTTGGCGGTACCCGCCCTTATCGCTCGTGTGGTA
ACGCTGCGAACCTACTGTCTTTTAGAGGGCCGGGTCACGGCCGACACCAC
GGAGGGGGATGTCTTCAAGCACGCAGCCAGCGACTTCGACCCCTCCTCTT
TCTTCTACCTGCTCCCAATCACCCTGCACGTCATGGCCGGACTCTGGTTC
TTCACAAGGACTTTGGCGTTATGTACGGCAGGCATCCTTCTCCTTGATAT
CTGGAGCTGGATTTGGCCGGGTGTGCTCGGAGGGTCTGAGATGATGGATA
CGTGCGCTCCCTCTAGTACGCCGTTGCGGCAAAAGAAAGTCTCACCCGTG
GCAGTGACTGAGGCGGAGGAGACACGACTTTTGAGGCCTTAAACGAGCTG
GAGAGTCTATGCACATGGCGGCATCAGCAACAATGCAGCACTGCGCCCTA
CCCACGTTCCCATTACTTTTCCCGCCCTTCATGCTGGGCCACGGGTGCCG
GGTCGATATGCGCTTCCACGCAGCAGGCAAGTGATGACGGAGATGGCCAT
GATGGTGCAGAAGCTCTTTTATATCACACCCTTTCTGCTTCTGACGATAA
CCGGTGCCTGTTCGGAGACGCCTCCATGTACGGTGAGCGCACTACCCCTC
TGCTGCCGGCCCCTGTTCCATCCTCTCTCACTCCGCCCCCATCCACGGGA
CATGTGATGGGAAGCAGTGAACGTAGCGCCTTTTCTTCGTACGTTGTAGG
AAGCTGTGTATAGGCCTGCACTGACGTCCGCATGAACAACACGAGCCTGA
TCGCTGTGATCTACGCTATTCTAGGCGTCTGTATGGTACAGCAAGCAGCA
TCCACCCCTCCCTTTCTGGCGCCGCGTGGTGTGCCTTCGCCTCTTTTCCT
TCCTTTGTCTGGCCTTGGCGGTACCCGCCCTTATCGCTCGTGTGGTAACG
CTGCGAACCTACTGTCTTTTAGAGGGCCGGGTCACGGCCGACACCACGGA
GGGGGATGTCTTCAAGCACGCAGCCAGCGACTTCGACCCCTCCTCTTTCT
TCTACCTGCTCCCAATCACCCTGCACGTCATGGCCGGACTCTGGTTCTTC
ACAAGGACTTTGGCGTTATGTACGGCAGGCATCCTTCTCCTTGATATCTG
GAGCTGGATTTGGCCGGGTGTGCTCGGAGGGTCTGAGATGATGGATACGT
GCGCTCCCTCTAGTACGCCGTTGCGGCAAAAGAAAGTCTCACCCGTGGCA
GTGACTGAGGCGGAGGAGACACGACTTTTGAG back to top
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