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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100270g4.5532.mrna |
| Orig protein id | gnl|cribi|Naga_100270g4.5532 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:587698..589821 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8963 ID=rna8963|Name=rna8963|organism=Nannochloropsis gaditana|type=mRNA|length=276bp
ATGTCGAACGAGGATGTGGTTGCCTTTGTGGACGAGAAGATGAGCGAGGT
TTTGCGGGAGGGAGGACGGGAGGGCATGGCCCAGGCGGGGATTGAGGGCG
AGTCGCAATGTGGGGAGGGAGAAGAAGGGAGGGAGGGCAGCGAGGGAAGA
GGCTGCGGAGGGCGAGAGGGATGGGGAGTGGATTGGCACGCCCTGGCGCG
GGCTCTGACGTGGGAGGCATATGTCCGGGGCAGTACGGACAACATCGGGG
TTTTGATCGTGGATCTGAATCGCTGA back to topprotein sequence of rna8963 >rna8963-protein ID=rna8963-protein|Name=rna8963|organism=Nannochloropsis gaditana|type=polypeptide|length=614bp
MDAATPYPAPRSSSEAVPDIETGIAAPLPLPTNAPQDQIREEEEELSGRP
PTMVPASTKDNPDEDKVPVGAGNESPMPRCGEGVASTAFRASGPRTSGVH
LQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWI
FVNTPTYLQDPTSWQRCIVYNTNNANATPQNFAVSASAFGGMMFIFMGLG
FKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLIS
LASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLY
ATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFL
LDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTA
YVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFL
VAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMER
PSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLT
PGMERQGNALEEPLLASGMGAESGWAGAARRLIFFMTMVEMHSRFPITYE
MRIEFRYWKGDLHG back to topmRNA from alignment at KK037250.1:587698..589821+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8963 ID=rna8963|Name=rna8963|organism=Nannochloropsis gaditana|type=mRNA|length=2124bp|location=Sequence derived from alignment at KK037250.1:587698..589821+ (Nannochloropsis gaditana)
ATGGATGCCGCAACGCCCTATCCTGCgcctcgttcttcttcgGAAGCAGT
CCCAGACATCGAGACCGGAATCGCAgcgcctctccctctacctACAAATG
CCCCCCAAGATCAAatccgagaggaggaagaggagttgTCCGGCAGGCCA
CCTACCATGGTCCCAGCGAGCACTAAGGACAATCCAGACGAGGACAAAGT
CCCAGTCGGAGCCGGCAACGAATCCCCCATGCCGCGTTGTGGGGAGGGTG
TGGCAAGCACGGCCTTCCGTGCAAGCGGTCCTCGGACGAGCGGCGTGCAC
CTCCAGAAAgacaacgaggaggaggaggaggaggatccgcTCATCGTCGC
CACTCGGACCCAATGCCTGGGGCTCTTACGGAAGCTCTTCTACGTGGTCA
TGCCGCTTTCCATCGTCGCCTCCATCTATGCTTGTTTGTACGGGTGGATA
TTTGTGAACACGCCAACCTACCTGCAGGATCCTACCAGCTGGCAACGCTG
TATCGTCTACAACACAAACAATGCCAACGCCACGCCCCAAAACTTCGCCG
TcagtgcctccgccttcgGGGGGATGATGTTCATTTTCATGGGGCTGGGA
TTCAAGGCCGGCTACCTGGGCTTGCAGGACATGGACCTGCTACCCTACTC
CCTCACAGTTACGTGCTACACCCTGCTCGGGCAACTTGTCTACCGGCCGG
TCAACCCCGTGGTCCCCGCCATCACCGAGCTCACCCCcaccctcatctcc
ctcgcctctttcctccgcccgggcATGTACGCCGACGTCCCCGACGCGGC
GGGCGCCTGCCAGCACGCCCGCCGGGTcaacgtctccttcctcgcctttg
tcctcgtcctcttcgctgCCAACTtctgcaacctcctcctACTCCTCTAC
GCCACCTACCGCACCCGGCGCGTCCCTCGCTCGTCCCGCTATCTCTTGGT
CTGGCACCGCCCGGCCCTTTGCCTGGTGGGcctcgccatcgccgcctaCA
TCGTCACAATCGCCGCCAAGGAGGATGCCGCGCTCAAgacgctcttcctt
ctcgacaAGGTGGGGCACGGctacctcttccctttccaacGCCCCACCCT
GGACACGgtcggcctcttcctcctcctcacggtGGCCAGCGTCGTCTACG
GGGCCTGCAAACAGGAACCGGAATCCTTCAAATGGGCCTCCTTTACCGCC
TatgtccacgtcctcctctcctacccTATCCTGATCAGGTAGGGATGCCg
caaaggaggcggagcaaTGGGAGCGGGGGAAACCCGGTGATGGGTGTGGG
GGCACGGCTCTGGCTCCTCCCATGTCTGGCTTGACTTgtcgcctcccttt
ctttccgaTTTCCCCATTTTCTTCCAGCAATTTTCAAGCCTACCACCTGT
ACGGTTTTTGGACGGACGCCGGCTGCACGCATTTCCTGGAGACAGACACC
ACGCACGCGGGGGGTGCGAACCGGCAGCTTCTCTTCTTGGTGGCCAAGAA
CAAGTACCCGGAGACGGAGAGAGGCTTCTGCCGGGACACACGGGTCGCTC
TGGTCGGGCAATGCGCCCAATTCATCATCATGCATCTGGCGATTGGGGCC
TGCCTgctcgtggtggtggcgaatTGGCGAATGGAGAGGCCTTCGATGCA
GCTCTTTGGTAGCCAGGCTTCGtcattcctctttcctgaCCCTCCGGCAA
AGGcagacggagaggggggaacgAGCGGGGAAATTCCGGCGGGGGGCgga
cagggcggggaggccggcgACCGCGTGATGTCTCTCACGCCCGGCATGGA
AAGGCAAGGAAATGCCTTGGAAGAACCCTTGCTCGCCTCGGGGATGGGTG
CAGGTACtaagcgagggggaggggagggcgggcggcccTTGCACCATCGG
CGCCAAAGCAGCGGCGCCTCCAGTGCGCACCGGGGCCATATGCGAAGGAG
CTCAGTGAATGACCATCTACTGGGACCAGTCTTGGACTGAAAGAATCGGG
GTGGGCGGGTGCTGCAAGAAGGCTTATTTTCTTCATGACTATGGTAGAGA
TGCATTCAAGGTTTCCAATTACATATGAGATGAGGATTGAGTTCAGATAC
TGGAAAGGGGATTTGCATGGATAG back to topCoding sequence (CDS) from alignment at KK037250.1:587698..589821+ >rna8963 ID=rna8963|Name=rna8963|organism=Nannochloropsis gaditana|type=CDS|length=5535bp|location=Sequence derived from alignment at KK037250.1:587698..589821+ (Nannochloropsis gaditana)
ATGGATGCCGCAACGCCCTATCCTGCgcctcgttcttcttcgGAAGCAGT
CCCAGACATCGAGACCGGAATCGCAgcgcctctccctctacctACAAATG
CCCCCCAAGATCAAatccgagaggaggaagaggagttgTCCGGCAGGCCA
CCTACCATGGTCCCAGCGAGCACTAAGGACAATCCAGACGAGGACAAAGT
CCCAGTCGGAGCCGGCAACGAATCCCCCATGCCGCGTTGTGGGGAGGGTG
TGGCAAGCACGGCCTTCCGTGCAAGCGGTCCTCGGACGAGCGGCGTGCAC
CTCCAGAAAgacaacgaggaggaggaggaggaggatccgcTCATCGTCGC
CACTCGGACCCAATGCCTGGGGCTCTTACGGAAGCTCTTCTACGTGGTCA
TGCCGCTTTCCATCGTCGCCTCCATCTATGCTTGTTTGTACGGGTGGATA
TTTGTGAACACGCCAACCTACCTGCAGGATCCTACCAGCTGGCAACGCTG
TATCGTCTACAACACAAACAATGCCAACGCCACGCCCCAAAACTTCGCCG
TcagtgcctccgccttcgGGGGGATGATGTTCATTTTCATGGGGCTGGGA
TTCAAGGCCGGCTACCTGGGCTTGCAGGACATGGACCTGCTACCCTACTC
CCTCACAGTTACGTGCTACACCCTGCTCGGGCAACTTGTCTACCGGCCGG
TCAACCCCGTGGTCCCCGCCATCACCGAGCTCACCCCcaccctcatctcc
ctcgcctctttcctccgcccgggcATGTACGCCGACGTCCCCGACGCGGC
GGGCGCCTGCCAGCACGCCCGCCGGGTcaacgtctccttcctcgcctttg
tcctcgtcctcttcgctgCCAACTtctgcaacctcctcctACTCCTCTAC
GCCACCTACCGCACCCGGCGCGTCCCTCGCTCGTCCCGCTATCTCTTGGT
CTGGCACCGCCCGGCCCTTTGCCTGGTGGGcctcgccatcgccgcctaCA
TCGTCACAATCGCCGCCAAGGAGGATGCCGCGCTCAAgacgctcttcctt
ctcgacaAGGTGGGGCACGGctacctcttccctttccaacGCCCCACCCT
GGACACGgtcggcctcttcctcctcctcacggtGGCCAGCGTCGTCTACG
GGGCCTGCAAACAGGAACCGGAATCCTTCAAATGGGCCTCCTTTACCGCC
TatgtccacgtcctcctctcctacccTATCCTGATCAGCAATTTTCAAGC
CTACCACCTGTACGGTTTTTGGACGGACGCCGGCTGCACGCATTTCCTGG
AGACAGACACCACGCACGCGGGGGGTGCGAACCGGCAGCTTCTCTTCTTG
GTGGCCAAGAACAAGTACCCGGAGACGGAGAGAGGCTTCTGCCGGGACAC
ACGGGTCGCTCTGGTCGGGCAATGCGCCCAATTCATCATCATGCATCTGG
CGATTGGGGCCTGCCTgctcgtggtggtggcgaatTGGCGAATGGAGAGG
CCTTCGATGCAGCTCTTTGGTAGCCAGGCTTCGtcattcctctttcctga
CCCTCCGGCAAAGGcagacggagaggggggaacgAGCGGGGAAATTCCGG
CGGGGGGCggacagggcggggaggccggcgACCGCGTGATGTCTCTCACG
CCCGGCATGGAAAGGCAAGGAAATGCCTTGGAAGAACCCTTGCTCGCCTC
GGGGATGGGTGCAGAATCGGGGTGGGCGGGTGCTGCAAGAAGGCTTATTT
TCTTCATGACTATGGTAGAGATGCATTCAAGGTTTCCAATTACATATGAG
ATGAGGATTGAGTTCAGATACTGGAAAGGGGATTTGCATGGATAGATGGA
TGCCGCAACGCCCTATCCTGCgcctcgttcttcttcgGAAGCAGTCCCAG
ACATCGAGACCGGAATCGCAgcgcctctccctctacctACAAATGCCCCC
CAAGATCAAatccgagaggaggaagaggagttgTCCGGCAGGCCACCTAC
CATGGTCCCAGCGAGCACTAAGGACAATCCAGACGAGGACAAAGTCCCAG
TCGGAGCCGGCAACGAATCCCCCATGCCGCGTTGTGGGGAGGGTGTGGCA
AGCACGGCCTTCCGTGCAAGCGGTCCTCGGACGAGCGGCGTGCACCTCCA
GAAAgacaacgaggaggaggaggaggaggatccgcTCATCGTCGCCACTC
GGACCCAATGCCTGGGGCTCTTACGGAAGCTCTTCTACGTGGTCATGCCG
CTTTCCATCGTCGCCTCCATCTATGCTTGTTTGTACGGGTGGATATTTGT
GAACACGCCAACCTACCTGCAGGATCCTACCAGCTGGCAACGCTGTATCG
TCTACAACACAAACAATGCCAACGCCACGCCCCAAAACTTCGCCGTcagt
gcctccgccttcgGGGGGATGATGTTCATTTTCATGGGGCTGGGATTCAA
GGCCGGCTACCTGGGCTTGCAGGACATGGACCTGCTACCCTACTCCCTCA
CAGTTACGTGCTACACCCTGCTCGGGCAACTTGTCTACCGGCCGGTCAAC
CCCGTGGTCCCCGCCATCACCGAGCTCACCCCcaccctcatctccctcgc
ctctttcctccgcccgggcATGTACGCCGACGTCCCCGACGCGGCGGGCG
CCTGCCAGCACGCCCGCCGGGTcaacgtctccttcctcgcctttgtcctc
gtcctcttcgctgCCAACTtctgcaacctcctcctACTCCTCTACGCCAC
CTACCGCACCCGGCGCGTCCCTCGCTCGTCCCGCTATCTCTTGGTCTGGC
ACCGCCCGGCCCTTTGCCTGGTGGGcctcgccatcgccgcctaCATCGTC
ACAATCGCCGCCAAGGAGGATGCCGCGCTCAAgacgctcttccttctcga
caAGGTGGGGCACGGctacctcttccctttccaacGCCCCACCCTGGACA
CGgtcggcctcttcctcctcctcacggtGGCCAGCGTCGTCTACGGGGCC
TGCAAACAGGAACCGGAATCCTTCAAATGGGCCTCCTTTACCGCCTatgt
ccacgtcctcctctcctacccTATCCTGATCAGCAATTTTCAAGCCTACC
ACCTGTACGGTTTTTGGACGGACGCCGGCTGCACGCATTTCCTGGAGACA
GACACCACGCACGCGGGGGGTGCGAACCGGCAGCTTCTCTTCTTGGTGGC
CAAGAACAAGTACCCGGAGACGGAGAGAGGCTTCTGCCGGGACACACGGG
TCGCTCTGGTCGGGCAATGCGCCCAATTCATCATCATGCATCTGGCGATT
GGGGCCTGCCTgctcgtggtggtggcgaatTGGCGAATGGAGAGGCCTTC
GATGCAGCTCTTTGGTAGCCAGGCTTCGtcattcctctttcctgaCCCTC
CGGCAAAGGcagacggagaggggggaacgAGCGGGGAAATTCCGGCGGGG
GGCggacagggcggggaggccggcgACCGCGTGATGTCTCTCACGCCCGG
CATGGAAAGGCAAGGAAATGCCTTGGAAGAACCCTTGCTCGCCTCGGGGA
TGGGTGCAGAATCGGGGTGGGCGGGTGCTGCAAGAAGGCTTATTTTCTTC
ATGACTATGGTAGAGATGCATTCAAGGTTTCCAATTACATATGAGATGAG
GATTGAGTTCAGATACTGGAAAGGGGATTTGCATGGATAGATGGATGCCG
CAACGCCCTATCCTGCgcctcgttcttcttcgGAAGCAGTCCCAGACATC
GAGACCGGAATCGCAgcgcctctccctctacctACAAATGCCCCCCAAGA
TCAAatccgagaggaggaagaggagttgTCCGGCAGGCCACCTACCATGG
TCCCAGCGAGCACTAAGGACAATCCAGACGAGGACAAAGTCCCAGTCGGA
GCCGGCAACGAATCCCCCATGCCGCGTTGTGGGGAGGGTGTGGCAAGCAC
GGCCTTCCGTGCAAGCGGTCCTCGGACGAGCGGCGTGCACCTCCAGAAAg
acaacgaggaggaggaggaggaggatccgcTCATCGTCGCCACTCGGACC
CAATGCCTGGGGCTCTTACGGAAGCTCTTCTACGTGGTCATGCCGCTTTC
CATCGTCGCCTCCATCTATGCTTGTTTGTACGGGTGGATATTTGTGAACA
CGCCAACCTACCTGCAGGATCCTACCAGCTGGCAACGCTGTATCGTCTAC
AACACAAACAATGCCAACGCCACGCCCCAAAACTTCGCCGTcagtgcctc
cgccttcgGGGGGATGATGTTCATTTTCATGGGGCTGGGATTCAAGGCCG
GCTACCTGGGCTTGCAGGACATGGACCTGCTACCCTACTCCCTCACAGTT
ACGTGCTACACCCTGCTCGGGCAACTTGTCTACCGGCCGGTCAACCCCGT
GGTCCCCGCCATCACCGAGCTCACCCCcaccctcatctccctcgcctctt
tcctccgcccgggcATGTACGCCGACGTCCCCGACGCGGCGGGCGCCTGC
CAGCACGCCCGCCGGGTcaacgtctccttcctcgcctttgtcctcgtcct
cttcgctgCCAACTtctgcaacctcctcctACTCCTCTACGCCACCTACC
GCACCCGGCGCGTCCCTCGCTCGTCCCGCTATCTCTTGGTCTGGCACCGC
CCGGCCCTTTGCCTGGTGGGcctcgccatcgccgcctaCATCGTCACAAT
CGCCGCCAAGGAGGATGCCGCGCTCAAgacgctcttccttctcgacaAGG
TGGGGCACGGctacctcttccctttccaacGCCCCACCCTGGACACGgtc
ggcctcttcctcctcctcacggtGGCCAGCGTCGTCTACGGGGCCTGCAA
ACAGGAACCGGAATCCTTCAAATGGGCCTCCTTTACCGCCTatgtccacg
tcctcctctcctacccTATCCTGATCAGCAATTTTCAAGCCTACCACCTG
TACGGTTTTTGGACGGACGCCGGCTGCACGCATTTCCTGGAGACAGACAC
CACGCACGCGGGGGGTGCGAACCGGCAGCTTCTCTTCTTGGTGGCCAAGA
ACAAGTACCCGGAGACGGAGAGAGGCTTCTGCCGGGACACACGGGTCGCT
CTGGTCGGGCAATGCGCCCAATTCATCATCATGCATCTGGCGATTGGGGC
CTGCCTgctcgtggtggtggcgaatTGGCGAATGGAGAGGCCTTCGATGC
AGCTCTTTGGTAGCCAGGCTTCGtcattcctctttcctgaCCCTCCGGCA
AAGGcagacggagaggggggaacgAGCGGGGAAATTCCGGCGGGGGGCgg
acagggcggggaggccggcgACCGCGTGATGTCTCTCACGCCCGGCATGG
AAAGGCAAGGAAATGCCTTGGAAGAACCCTTGCTCGCCTCGGGGATGGGT
GCAGAATCGGGGTGGGCGGGTGCTGCAAGAAGGCTTATTTTCTTCATGAC
TATGGTAGAGATGCATTCAAGGTTTCCAATTACATATGAGATGAGGATTG
AGTTCAGATACTGGAAAGGGGATTTGCATGGATAG back to top
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