EWM21737.1, cds8933 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585102066|gb|EWM21737.1| (hypothetical protein Naga_100270g4 [Nannochloropsis gaditana]) HSP 1 Score: 1268.06 bits (3280), Expect = 0.000e+0 Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 0
Query: 1 MDAATPYPAPRSSSEAVPDIETGIAAPLPLPTNAPQDQIREEEEELSGRPPTMVPASTKDNPDEDKVPVGAGNESPMPRCGEGVASTAFRASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTNNANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGAESGWAGAARRLIFFMTMVEMHSRFPITYEMRIEFRYWKGDLHG 614
MDAATPYPAPRSSSEAVPDIETGIAAPLPLPTNAPQDQIREEEEELSGRPPTMVPASTKDNPDEDKVPVGAGNESPMPRCGEGVASTAFRASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTNNANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGAESGWAGAARRLIFFMTMVEMHSRFPITYEMRIEFRYWKGDLHG
Sbjct: 1 MDAATPYPAPRSSSEAVPDIETGIAAPLPLPTNAPQDQIREEEEELSGRPPTMVPASTKDNPDEDKVPVGAGNESPMPRCGEGVASTAFRASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTNNANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGAESGWAGAARRLIFFMTMVEMHSRFPITYEMRIEFRYWKGDLHG 614
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|553190289|ref|XP_005855162.1| (hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526] >gi|422293903|gb|EKU21203.1| hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 776.548 bits (2004), Expect = 0.000e+0 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
Query: 193 MFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGA 571
MFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGA
Sbjct: 1 MFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGA 379
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585108059|gb|EWM26071.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 206.068 bits (523), Expect = 2.289e-55 Identity = 140/459 (30.50%), Postives = 234/459 (50.98%), Query Frame = 0
Query: 72 GNESPMPR-CGEGVASTAFR--ASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTN------NANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH--LYGFWTDAGCTHFLET---DTTHAGGANRQLLFLVAKN----KYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQL 505
SP P G+ +S++ R SG ++S K +E++ + + L LR LF V +PL+I+ +AC+Y WIF N +Y +D WQRC+VY + A N+ ++A+++ G +F+F+ + FK Y+G++D D+LPYSL +LG +VYR P+ P +L+ TL++L +++P MY+ P AA +C A +N FL F V+VL + F + A YR + + R+ L + L L+ +A Y+ AKE A TL +L++ +F F + LD V L +++T+ ++ G CK + E FK +F +Y+HV+LSYP +++ AY+ Y + D D + A ++ AK+ ++P+ CR ++L+GQ QF HL + ACL ++ AN + ++L
Sbjct: 12 ARSSPPPSGAGDANSSSSKRRIESGKKSSS----KQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKD--DWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYR---IGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPA-----YVTAKSAIFERFPKEAETLCRMCHLSLIGQLIQFGAQHLVVIACLYILYANRDLPAQRLRL 455
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585108060|gb|EWM26072.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 186.808 bits (473), Expect = 3.498e-49 Identity = 118/364 (32.42%), Postives = 195/364 (53.57%), Query Frame = 0
Query: 72 GNESPMPR-CGEGVASTAFR--ASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTN------NANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH 419
SP P G+ +S++ R SG ++S K +E++ + + L LR LF V +PL+I+ +AC+Y WIF N +Y +D WQRC+VY + A N+ ++A+++ G +F+F+ + FK Y+G++D D+LPYSL +LG +VYR P+ P +L+ TL++L +++P MY+ P AA +C A +N FL F V+VL + F + A YR + + R+ L + L L+ +A Y+ AKE A TL +L++ +F F + LD V L +++T+ ++ G CK + E FK +F +Y+HV+LSYP +++ AY+
Sbjct: 12 ARSSPPPSGAGDANSSSSKRRIESGKKSSS----KQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKD--DWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYR---IGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYN 365
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|553182461|ref|XP_005853731.1| (hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526] >gi|553186167|ref|XP_005854371.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422294686|gb|EKU21986.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422295328|gb|EKU22627.1| hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 125.946 bits (315), Expect = 7.470e-28 Identity = 75/229 (32.75%), Postives = 125/229 (54.59%), Query Frame = 0
Query: 72 GNESPMPR-CGEGVASTAFR--ASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTN------NANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAFVLVL 287
SP P G+ +S++ R SG ++S K +E++ + + L LR LF V +PL+I+ +AC+Y WIF N +Y +D WQRC+VY + A N+ ++A+++ G +F+F+ + FK Y+G++D D+LPYSL +LG +VYR P+ P +L+ TL++L +++P MY+ P AA +C A +N FL F +++
Sbjct: 12 ARSSPPPSGAGDANSSSSKRRIESGKKSSS----KQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKD--DWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANMMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILV 233
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585109123|gb|EWM26963.1| (hypothetical protein Naga_101509g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 111.309 bits (277), Expect = 1.163e-23 Identity = 89/282 (31.56%), Postives = 133/282 (47.16%), Query Frame = 0
Query: 95 RTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVY-NTNNANATPQN-FAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGA-----CQHARRVNVSFLA--FVLVLFAANFCNLLLLLYATYRTRRVPRSSRYL---LVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQR 364
R GVH NEE + + + L+ L V +P + ++I A +Y WI Y WQRC+V N Q F SA+ F +F+ L F GL D D+LPY+L V+ LLG VYR +P+ P ++ TL++L F+ P MYAD+P G C HA N +FL ++++L ++ A Y PR YL L R L LV + + Y++T+ AKE A++T+ +L + GY+F F++
Sbjct: 7 RWGGVH----NEEVDR----------KAIFALKILLLVAIPTVMASTILATVYAWI--QGRQYGYTVEDWQRCLVSPNKGGFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLFSI-----AVYTIAFSPRD--YLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKK 265
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585105799|gb|EWM24397.1| (hypothetical protein Naga_100283g1 [Nannochloropsis gaditana]) HSP 1 Score: 65.855 bits (159), Expect = 7.303e-9 Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = 0
Query: 121 QCLGLLRKLF-YVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCI-VYNTNNANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRP 257
+ L LLR +F +V PL I + I+ CLY I+ +Y P W +C+ V N N + F SAS F G ++ + + LGL+D D L +S LLG +YR P ++ TL +L+ ++ P
Sbjct: 36 ESLKLLRIIFPLLVAPLCITSFIFTCLYAHIYAREGSY--GPEDWPKCLTVPNIGNLHLDNNRFCTSASNFAGQAYLSLLVAAGGLQLGLRDNDYLLFSSFTCIVGLLGITIYRESYPYFLDPHFMSTTLFTLSKYIHP 172 The following BLAST results are available for this feature:
BLAST of EWM21737.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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