EWM21737.1, cds8933 (CDS) Nannochloropsis gaditana

Overview
NameEWM21737.1
Unique Namecds8933
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:587698..588935 +
Alignment locationKK037250.1:589075..589550 +
Alignment locationKK037250.1:589691..589821 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21737.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100270g4.5532.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:587698..588935 +
KK037250.1supercontigKK037250.1:589075..589550 +
KK037250.1supercontigKK037250.1:589691..589821 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585102066|gb|EWM21737.1| (hypothetical protein Naga_100270g4 [Nannochloropsis gaditana])

HSP 1 Score: 1268.06 bits (3280), Expect = 0.000e+0
Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 0
Query:    1 MDAATPYPAPRSSSEAVPDIETGIAAPLPLPTNAPQDQIREEEEELSGRPPTMVPASTKDNPDEDKVPVGAGNESPMPRCGEGVASTAFRASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTNNANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGAESGWAGAARRLIFFMTMVEMHSRFPITYEMRIEFRYWKGDLHG 614
            MDAATPYPAPRSSSEAVPDIETGIAAPLPLPTNAPQDQIREEEEELSGRPPTMVPASTKDNPDEDKVPVGAGNESPMPRCGEGVASTAFRASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTNNANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGAESGWAGAARRLIFFMTMVEMHSRFPITYEMRIEFRYWKGDLHG
Sbjct:    1 MDAATPYPAPRSSSEAVPDIETGIAAPLPLPTNAPQDQIREEEEELSGRPPTMVPASTKDNPDEDKVPVGAGNESPMPRCGEGVASTAFRASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTNNANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGAESGWAGAARRLIFFMTMVEMHSRFPITYEMRIEFRYWKGDLHG 614          
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|553190289|ref|XP_005855162.1| (hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526] >gi|422293903|gb|EKU21203.1| hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 776.548 bits (2004), Expect = 0.000e+0
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0
Query:  193 MFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGA 571
            MFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGA
Sbjct:    1 MFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGACQHARRVNVSFLAFVLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYHLYGFWTDAGCTHFLETDTTHAGGANRQLLFLVAKNKYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQLFGSQASSFLFPDPPAKADGEGGTSGEIPAGGGQGGEAGDRVMSLTPGMERQGNALEEPLLASGMGA 379          
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585108059|gb|EWM26071.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana])

HSP 1 Score: 206.068 bits (523), Expect = 2.289e-55
Identity = 140/459 (30.50%), Postives = 234/459 (50.98%), Query Frame = 0
Query:   72 GNESPMPR-CGEGVASTAFR--ASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTN------NANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH--LYGFWTDAGCTHFLET---DTTHAGGANRQLLFLVAKN----KYPETERGFCRDTRVALVGQCAQFIIMHLAIGACLLVVVANWRMERPSMQL 505
               SP P   G+  +S++ R   SG ++S     K  +E++         + + L  LR LF V +PL+I+   +AC+Y WIF N  +Y +D   WQRC+VY          + A   N+ ++A+++ G +F+F+ + FK  Y+G++D D+LPYSL      +LG +VYR   P+ P   +L+ TL++L  +++P MY+  P AA     +C  A  +N  FL F   V+VL  + F  +     A YR   + +  R+ L  +   L L+ +A   Y+    AKE  A  TL +L++     +F F +  LD V L +++T+ ++  G CK + E FK  +F +Y+HV+LSYP +++   AY+   Y +  D            D  +   A     ++ AK+    ++P+     CR   ++L+GQ  QF   HL + ACL ++ AN  +    ++L
Sbjct:   12 ARSSPPPSGAGDANSSSSKRRIESGKKSSS----KQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKD--DWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYR---IGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPA-----YVTAKSAIFERFPKEAETLCRMCHLSLIGQLIQFGAQHLVVIACLYILYANRDLPAQRLRL 455          
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585108060|gb|EWM26072.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana])

HSP 1 Score: 186.808 bits (473), Expect = 3.498e-49
Identity = 118/364 (32.42%), Postives = 195/364 (53.57%), Query Frame = 0
Query:   72 GNESPMPR-CGEGVASTAFR--ASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTN------NANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH 419
               SP P   G+  +S++ R   SG ++S     K  +E++         + + L  LR LF V +PL+I+   +AC+Y WIF N  +Y +D   WQRC+VY          + A   N+ ++A+++ G +F+F+ + FK  Y+G++D D+LPYSL      +LG +VYR   P+ P   +L+ TL++L  +++P MY+  P AA     +C  A  +N  FL F   V+VL  + F  +     A YR   + +  R+ L  +   L L+ +A   Y+    AKE  A  TL +L++     +F F +  LD V L +++T+ ++  G CK + E FK  +F +Y+HV+LSYP +++   AY+
Sbjct:   12 ARSSPPPSGAGDANSSSSKRRIESGKKSSS----KQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKD--DWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYR---IGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYN 365          
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|553182461|ref|XP_005853731.1| (hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526] >gi|553186167|ref|XP_005854371.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422294686|gb|EKU21986.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422295328|gb|EKU22627.1| hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 125.946 bits (315), Expect = 7.470e-28
Identity = 75/229 (32.75%), Postives = 125/229 (54.59%), Query Frame = 0
Query:   72 GNESPMPR-CGEGVASTAFR--ASGPRTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNTN------NANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA----GACQHARRVNVSFLAFVLVL 287
               SP P   G+  +S++ R   SG ++S     K  +E++         + + L  LR LF V +PL+I+   +AC+Y WIF N  +Y +D   WQRC+VY          + A   N+ ++A+++ G +F+F+ + FK  Y+G++D D+LPYSL      +LG +VYR   P+ P   +L+ TL++L  +++P MY+  P AA     +C  A  +N  FL F +++
Sbjct:   12 ARSSPPPSGAGDANSSSSKRRIESGKKSSS----KQTKEDQRLARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKD--DWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANMMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPAAAKWAPASCSLAYALNKWFLIFQILV 233          
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585109123|gb|EWM26963.1| (hypothetical protein Naga_101509g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 111.309 bits (277), Expect = 1.163e-23
Identity = 89/282 (31.56%), Postives = 133/282 (47.16%), Query Frame = 0
Query:   95 RTSGVHLQKDNEEEEEEDPLIVATRTQCLGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVY-NTNNANATPQN-FAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGA-----CQHARRVNVSFLA--FVLVLFAANFCNLLLLLYATYRTRRVPRSSRYL---LVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQR 364
            R  GVH    NEE +           + +  L+ L  V +P  + ++I A +Y WI      Y      WQRC+V  N        Q  F  SA+ F     +F+ L F     GL D D+LPY+L V+   LLG  VYR  +P+ P    ++ TL++L  F+ P MYAD+P   G      C HA   N +FL   ++++L      ++     A Y     PR   YL   L   R  L LV + +  Y++T+ AKE  A++T+ +L +   GY+F F++
Sbjct:    7 RWGGVH----NEEVDR----------KAIFALKILLLVAIPTVMASTILATVYAWI--QGRQYGYTVEDWQRCLVSPNKGGFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLFSI-----AVYTIAFSPRD--YLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKK 265          
BLAST of EWM21737.1 vs. NCBI_GenBank
Match: gi|585105799|gb|EWM24397.1| (hypothetical protein Naga_100283g1 [Nannochloropsis gaditana])

HSP 1 Score: 65.855 bits (159), Expect = 7.303e-9
Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = 0
Query:  121 QCLGLLRKLF-YVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCI-VYNTNNANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRP 257
            + L LLR +F  +V PL I + I+ CLY  I+    +Y   P  W +C+ V N  N +     F  SAS F G  ++ + +      LGL+D D L +S       LLG  +YR   P       ++ TL +L+ ++ P
Sbjct:   36 ESLKLLRIIFPLLVAPLCITSFIFTCLYAHIYAREGSY--GPEDWPKCLTVPNIGNLHLDNNRFCTSASNFAGQAYLSLLVAAGGLQLGLRDNDYLLFSSFTCIVGLLGITIYRESYPYFLDPHFMSTTLFTLSKYIHP 172          
The following BLAST results are available for this feature:
BLAST of EWM21737.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585102066|gb|EWM21737.1|0.000e+0100.00hypothetical protein Naga_100270g4 [Nannochloropsi... [more]
gi|553190289|ref|XP_005855162.1|0.000e+0100.00hypothetical protein NGA_0147800, partial [Nannoch... [more]
gi|585108059|gb|EWM26071.1|2.289e-5530.50hypothetical protein Naga_100278g4 [Nannochloropsi... [more]
gi|585108060|gb|EWM26072.1|3.498e-4932.42hypothetical protein Naga_100278g4 [Nannochloropsi... [more]
gi|553182461|ref|XP_005853731.1|7.470e-2832.75hypothetical protein NGA_0163502 [Nannochloropsis ... [more]
gi|585109123|gb|EWM26963.1|1.163e-2331.56hypothetical protein Naga_101509g1, partial [Nanno... [more]
gi|585105799|gb|EWM24397.1|7.303e-931.65hypothetical protein Naga_100283g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8963rna8963Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications