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Properties
| Property Name | Value |
|---|
| Product | bifunctional polynucleotide phosphatase kinase |
| Orig transcript id | gnl|cribi|Naga_100213g9.9990.mrna |
| Orig protein id | gnl|cribi|Naga_100213g9.9990 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:551660..554230 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8952 ID=rna8952|Name=rna8952|organism=Nannochloropsis gaditana|type=mRNA|length=2668bp
TCAGACTTTTACTTCTAGCCCCCCGCTCGCTTCCCTTCCTTCACTTTCGG
ATTAATTCCAACGCGCAACCAAATTCGACACACAGGCAGGGCGCCGTGCC
GGTTGTCAGGCCTGTAAGAGCCCGGCAAAACCTTCCTGGTTCATTTTATT
CTTTGCTGGACTCTCACCCCCAGGGGCATGTCGAAACCGGCTGTGTCGCC
TGTCGCACCTCCCCCCACGTCCTGTTTCCCCCTACTCTTCACCGCCACCT
CCATCCGTCGCGCCCGGCAAAGGATCCGTGCCCGGACGATAAATACACTT
CATGCCTACAAGAAAGAGTTGGACGGGTCGCTAGAAACGACATCCACGAC
TTGCGCTGCAACGACGACGACCACAGTGGGCACCATTATCGAAGGCAGCA
GCACAGCGACATGTGCTGCCACGAATCAAGTAGCAGCTTCGCAAGAAAGC
ACCAGTTGTCGCAGGCTCGACGTCGAATTTCTTTCCCAAACTTCCGCAAC
TATAGCGATCGCCCCATCCTCCCCATCCACTGTAGCCCCCCCGCACGACC
AGAGCGTGGGCACGACCGCCGCCAATCCCGCCATCTCCTCACCCGGGAAG
AGAGGTACGGACACGAGCTTGGGCCTGATTCCGTCCGAGTCGAGCGAGGA
CCCATTCTCCCACGCGCAGGCTAGCAAGCAAGAAACGCAAGAGACGGAAA
AGCCCGCCTCTTTAGTCGTGGCACCCAGGTCGGCGACCGGCACGCACGCC
CCCACCCTCGGTGCAGGCCTCGACCTTCCCAACACAGCGGCCGCTGCTCC
CGACCCCTTGCCTACCGCCACCCCTCCCTCCAGCCGTGCTCCTCTTCGCT
CCCTTTCCATGGGTGGGAAGCCCCGTGCCCCTAACTCTGCCTCTCGCCCT
CCCTCTCGCCCGCCCTCCATGCCCCTCGCTGGGAATGACCGCTTCTATCA
CCCTGCCCTGCGGCGCAGCGGCAGCAGGAGCCTAACTGCAATTCCAAGCT
TGGGATTAAGCGGAAGCAGAGGCGGCAGGGGCCTCGAGTCGGGGGGACTG
GACGCGTCCCTCTCCTCTTCCTCCACCCCCCAGCACGTCCCCACCCTGGG
AGCGCTCAAGGCGCATTTTACGTCCTCGACCTCCTCCTTCTCCGCCTCTT
TCTCCGGCCGTCGACGCGCCTCCTTCACCGCGGGGACAATGGGGGGCCGC
CACAACCCTCCCCCCCTGACACGGCGCCTGAGCTTGCAAGAGTTGTTGCA
ACCTCGCGAAGACTATTCCTACCGCGCCGACCCCTCTGCTCCCACCCTCC
CGCCCCGTCTCCTGCCCATGATCAGCAACGGCATGGCCCGCCTTGTCGTC
AACATGAAGGAGGCCTACATGACCCCCGCCACCTGGAAGCTCTGTTACTC
TCTCTTCCGGGCCGAAGACGCCGCTAAGATTCAACGCTTCCGTTTCGAGA
AGGACCGGCGCCTGTCCTTGGGCAGCCAGCTTTTGCAACGGGCAGTGATC
GCGTGGACGTTCGGGGTAAGCTACCCGGAGATTGTGATCTCCAGGACGGA
GAAAGGGAAGCCCTTCTTCAAGTACACGCCGACGCACCCGGGGGAGGTGC
CGGGGGAGGAGGAGACGGCCCAGGTGCCGTTCCCCAACTGGAACTACAAC
GTCTCGCACCACGGAGACTTCGTGGGTATTGCCTCCGAGCCCGTCTGTCT
GGTGGGCCTGGACATCATGAACGCCAAGGAGAAGCCTCGGGGGGGCGGGC
GAGAGCGCGGGGCGCACGATTTCTTCAAGTCTTTCCATCGCCAGCTGAGC
GCGACGGAATGGGGATCCATCTACGAGGCCCCCAGCGAAGAGACCAAATT
GGAGCGCTTTTATCGGCAGTGGGCGTTGAAGGAGGCCTACATCAAGGCCA
TCGGCAGCGGACTCTCCTTCTCCCCCCGGCGCATCGAGATCACAGGCTTG
GACCATGAGCAGAGACCGTACACAGAAGAAGCATACGACCCTTCCATGCT
CCGAATCGATGGCGCCGAGCGCCCCGATTGGAAATTTAAATTCTCGGCCC
TGGACTATGGCCACGTGGCATGCGTCTCCCGCGGGCCCCCCTCGGACGCC
ATCGAGGACTACCGTAAGAACCTTCTAGAACCCTGGCTGCCCAACAGCCC
GTTGCAATACGGCTTGGAGAGCGTGCAGCCGGAATTTGAGGTGCTCAGTC
TTCGCGAACTGATCCCGGTCCACAGGTTGGAAGAGTTTGACCGATCGGTG
GCGGTGGGGAACGGGGAGGGTATCGAGGAGGGATTGGTCCTGGGGCTCTC
GGAGAGGTGCGCATCGCAGCCATAAAGTGCCTCGGAGACTTAAGGCAGGA
GTAGGAGGGGCGAAGGCGAAGGATGACCACAGAGGTGGAAGTCTATGGTC
CCTCCGTAGGTCGGAGGAAGGGATGAGTCGGCGACATAGAGGGGCCTGGC
GGGGGAGGGTGTTTGGGAATGTCAACATGGGTTCTGCTTGGTCTCTCTTC
CCGCCGCCCAACACGGGGAGAATGGGGAAGGGGTGGGGTAGGGCGAGGGA
GAGCAAGTCAAGGAGGGCATATCCGGGAGTGAATGAACGCCAGAAGGTAG
GAGACGCATGGGGACGCCCAGGGCCAAGACGCCTGAAATTATTGATAGCA
CACATTGTTTACCCCTTC back to topprotein sequence of rna8952 >rna8952-protein ID=rna8952-protein|Name=rna8952|organism=Nannochloropsis gaditana|type=polypeptide|length=626bp
MRMAPSSGESPLFLKGVHAYFLGLSSKIAEAARKGVEKQGGKIIPPRAKI
PPMFQKAKAVADSVGKSLPQGVTHVLCDPDICRQSSPDSILRALDVQGPL
PSSVVVVRLPWLSECLRLGHRVDTGPYEVDMNAAPTRLPEDGLTPGRGVK
HKTCPDEATQSTEEDEGPTAPRHKRPRIIKCQDDTLLPAPPLLESREPPR
RLSFPFLPPSQVWSLHDLGLLHLRVQNADTEAPRPAMALREDAVMPPSLA
SPAPPIASSPASLPRPSAPSPPSLPDAHSVPISPATPRAQTSSVSAPPVR
IAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVII
SNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGS
WYLLEERYPEGIDVSRSFFVGDAAGRPKQGPFRPRDHGDGDLKFAVNVGL
AFQTPEECFHKSRSPRDAGAEAVERLRRAWVSPVRGYLREAGMGGSEAAG
AACTSRCTGEGEGRRVDAPPPTLPKYGGPTCSETGPVSGDPVQPCLPTPP
PSHLPPPPPLWPGSHPVGRPPCQREIHVLSHDPPAPHPRQPRHPQDSRKV
PASCRPRTGSGPLHRHRRHQFSEGAS back to topmRNA from alignment at KK037250.1:551660..554230+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8952 ID=rna8952|Name=rna8952|organism=Nannochloropsis gaditana|type=mRNA|length=2571bp|location=Sequence derived from alignment at KK037250.1:551660..554230+ (Nannochloropsis gaditana)
aggaaaatgaacCCCAGCATCCCTGTTGACGATTATTCCTAACCCATTCA
GAAAAGTGCATGAGAATGGCACCGTCATCGGGAGAATCGCCATTGTTTCT
CAAAGGTGTTCATGCTTATTTTTTGGGGCTGAGCAGCAAGATAGCTGAAG
CTGCCCGGAAGGGCGTGGAAAAACAAGGTGGCAAAATTATTCCTCCCAGG
GCGAAAATACCACCCATGTTTCAGAAGGCCAAAGCCGTGGCGGACAGTGT
CGGCAAATCACTTCCACAAGGCGTGACGCATGTTCTCTGCGACCCTGACA
TATGCCGGCAGTCCTCACCGGACTCGATCCTCCGGGCCCTAGACGTGCAG
gggcctctcccttcttctgtTGTCGTAGTCCGCCTGCCCTGGCTCTCCGA
ATGTCTGCGTCTGGGACACCGCGTGGACACGGGACCTTACGAGGTCGACA
TGAACGCGGCTCCCACTCGGCTGCCAGAGGACGGCCTCACGCCGGGCCGC
GGCGTCAAGCACAAGACCTGTCCCGACGAAGCCACCCAGAgtacggagga
ggacgaagggccCACAGCACCGCGTCACAAGCGTCCCCGCATCATAAAAT
GCCAAGACgacaccctccttcctgccccgcccctgTTGGAAAGCCGGGAA
CCCCCCCGGCGgttgtccttccctttcctgcctccttcccaggtCTGGTC
CCTCCACGACCtcggtctcctccatctccgtgtCCAAAACGCCGACACGG
aagccccccgcccagcgATGGCGCTGAGGGAAGATGCTGTCATGCCTCCG
TCGCtggcttcccccgcccctcccatcgcctcctcccccgcctccctgcc
tcggccctccgctccatcccccccttccctccccgacgccCACAGTGTGC
CTATTTCTCCGGCCACGCCCAGGGCTCAAACGTCGTCCGTGTCTGCACCT
CCCGTCCGTATCGCTGCCTTCGACCTCGACTCCACCCTCATCAAGACCCG
CTCCGAGGGcgcctttgcctcctcccctaccgaCTGGCAATGgttcgctc
cctccgtccctgcctcccttcgctccctGCACGAGCAGGGCTACAAGATC
GTCATCATTTCGAACCAGCGTGGGATTGAGAGCAAGAAGACggacctctc
ctccctcctccagcgcctctcTTCCGTCGtggccgccctccacctccccg
gcctgGAAGGCTTCTTCGCCACCCACACCAACGTCTTCTACAAGCCGGCG
CCCGGGAGTTGGTACCTTCTGGAAGAAAGATACCCGGAGGGCATAGACGT
AAGCCGGAGCTTCTTTGTGGGCGACGCGGCGGGACGGCCGAAGCAAGGCC
CTTTCCGTCCGCGGGACCATGGCGACGGGGACCTCAAGTTCGCCGTGAAC
GTGGGCCTCGCCTTTCAGACCCCGGAGGAATGCTTTCACAAGAGCCGAAG
CCCCCGGGACGCGggcgcggaggcggtggagaggCTTCGGCGCGCCTGGG
TTTCGCCGGTCCGGGGCTacctgagggaggcagggatgggaggCTCTGAG
GCCGCGGGTGCCGCATGTACCAGTCGATGTAccggagaaggggaaggccg
aCGTGTGGATGCCCCACCTCCCACCCTGCCGAAGTACGGCGGCCCTACAT
GCTCGGAGACAGGCCCTGTGAGCGGCGATCCTGTCCAGCCTTGTCTGCCc
actcccccgccctcccacctccctccccccccccccctctggccTGGAAG
CCATCCTGTTGGTCGGCCCCCCTGCCAGCGGGAAATCCACGTTTTGTCGC
ACGACCCTCCCGCACCACACCCGCGTCAACCAAGACACCCTCAAGACTCT
CGGAAAGTGCCGGCAAGCTGCCGCCCACGCACTGGGTCAGGGCCACTCCA
TCGTCATCGACGCCACCAATTCTCGGAAGGAGCTTCGTAAGGACTGGGTG
AGGTTTTTGCGCGAATGccctctcccggcccctccgtcttcccctgcctc
ctccccctcttcctcaccctcGCCCAAGGCCtcgatgccctccctcctcc
tcaagttTGTGGAGTTTCTCCCGCCCAAAACCGCCGTTCTCCACCTTAAC
GCCTTCCGCGGGGTGAACTTGGACGGCGCGCGAAGGACAAGCGAGGCCCC
GCGCCGTGTCCCCGACGTGGTCATTCACTCCTACTACAAGAACGCGCAGC
CCGTGGGGGAggcttggaaggaggaaggcttcgaCGCGCACTCGGTTGTC
AAGGAGCTGGTATTGGAGAGGTTCCAAAACCGACGAGAAGCCCATCTCTT
CGGGTGTTTCTtaccggcgggggggaggtgatggggGGCAACCaggaatg
gaaagaggagggagggagacgggcgaGGGTGTGGCTGTCCTTTGGATGCG
AGCAAGGAAGGCGGCTAGTCCGGGAATggaagtgggaaggggggtgaTTT
CAAGGGGTGGGTACGGCATGATTTGCGGTGGACCATggccagggggaggt
ggcACGCAATGTAACGAAGTAGGAATCAAAGACTGCTGATCCGGAGCGCC
CTCTTGTCTTTCCCACGCAGA back to topCoding sequence (CDS) from alignment at KK037250.1:551660..554230+ >rna8952 ID=rna8952|Name=rna8952|organism=Nannochloropsis gaditana|type=CDS|length=1881bp|location=Sequence derived from alignment at KK037250.1:551660..554230+ (Nannochloropsis gaditana)
ATGAGAATGGCACCGTCATCGGGAGAATCGCCATTGTTTCTCAAAGGTGT
TCATGCTTATTTTTTGGGGCTGAGCAGCAAGATAGCTGAAGCTGCCCGGA
AGGGCGTGGAAAAACAAGGTGGCAAAATTATTCCTCCCAGGGCGAAAATA
CCACCCATGTTTCAGAAGGCCAAAGCCGTGGCGGACAGTGTCGGCAAATC
ACTTCCACAAGGCGTGACGCATGTTCTCTGCGACCCTGACATATGCCGGC
AGTCCTCACCGGACTCGATCCTCCGGGCCCTAGACGTGCAGgggcctctc
ccttcttctgtTGTCGTAGTCCGCCTGCCCTGGCTCTCCGAATGTCTGCG
TCTGGGACACCGCGTGGACACGGGACCTTACGAGGTCGACATGAACGCGG
CTCCCACTCGGCTGCCAGAGGACGGCCTCACGCCGGGCCGCGGCGTCAAG
CACAAGACCTGTCCCGACGAAGCCACCCAGAgtacggaggaggacgaagg
gccCACAGCACCGCGTCACAAGCGTCCCCGCATCATAAAATGCCAAGACg
acaccctccttcctgccccgcccctgTTGGAAAGCCGGGAACCCCCCCGG
CGgttgtccttccctttcctgcctccttcccaggtCTGGTCCCTCCACGA
CCtcggtctcctccatctccgtgtCCAAAACGCCGACACGGaagcccccc
gcccagcgATGGCGCTGAGGGAAGATGCTGTCATGCCTCCGTCGCtggct
tcccccgcccctcccatcgcctcctcccccgcctccctgcctcggccctc
cgctccatcccccccttccctccccgacgccCACAGTGTGCCTATTTCTC
CGGCCACGCCCAGGGCTCAAACGTCGTCCGTGTCTGCACCTCCCGTCCGT
ATCGCTGCCTTCGACCTCGACTCCACCCTCATCAAGACCCGCTCCGAGGG
cgcctttgcctcctcccctaccgaCTGGCAATGgttcgctccctccgtcc
ctgcctcccttcgctccctGCACGAGCAGGGCTACAAGATCGTCATCATT
TCGAACCAGCGTGGGATTGAGAGCAAGAAGACggacctctcctccctcct
ccagcgcctctcTTCCGTCGtggccgccctccacctccccggcctgGAAG
GCTTCTTCGCCACCCACACCAACGTCTTCTACAAGCCGGCGCCCGGGAGT
TGGTACCTTCTGGAAGAAAGATACCCGGAGGGCATAGACGTAAGCCGGAG
CTTCTTTGTGGGCGACGCGGCGGGACGGCCGAAGCAAGGCCCTTTCCGTC
CGCGGGACCATGGCGACGGGGACCTCAAGTTCGCCGTGAACGTGGGCCTC
GCCTTTCAGACCCCGGAGGAATGCTTTCACAAGAGCCGAAGCCCCCGGGA
CGCGggcgcggaggcggtggagaggCTTCGGCGCGCCTGGGTTTCGCCGG
TCCGGGGCTacctgagggaggcagggatgggaggCTCTGAGGCCGCGGGT
GCCGCATGTACCAGTCGATGTAccggagaaggggaaggccgaCGTGTGGA
TGCCCCACCTCCCACCCTGCCGAAGTACGGCGGCCCTACATGCTCGGAGA
CAGGCCCTGTGAGCGGCGATCCTGTCCAGCCTTGTCTGCCcactcccccg
ccctcccacctccctccccccccccccctctggccTGGAAGCCATCCTGT
TGGTCGGCCCCCCTGCCAGCGGGAAATCCACGTTTTGTCGCACGACCCTC
CCGCACCACACCCGCGTCAACCAAGACACCCTCAAGACTCTCGGAAAGTG
CCGGCAAGCTGCCGCCCACGCACTGGGTCAGGGCCACTCCATCGTCATCG
ACGCCACCAATTCTCGGAAGGAGCTTCGTAA back to top
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