EWM21756.1, cds8922 (CDS) Nannochloropsis gaditana

Overview
NameEWM21756.1
Unique Namecds8922
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:551719..553599 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21756.1
Productbifunctional polynucleotide phosphatase kinase
Orig transcript idgnl|cribi|Naga_100213g9.9990.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:551719..553599 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD-like_dom
IPR006549HAD-SF_hydro_IIIA
IPR013954PNK3P
IPR001357BRCT_dom
IPR006551Polynucleotide_phosphatase
Homology
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|585102088|gb|EWM21756.1| (bifunctional polynucleotide phosphatase kinase [Nannochloropsis gaditana])

HSP 1 Score: 1248.8 bits (3230), Expect = 0.000e+0
Identity = 626/626 (100.00%), Postives = 626/626 (100.00%), Query Frame = 0
Query:    1 MRMAPSSGESPLFLKGVHAYFLGLSSKIAEAARKGVEKQGGKIIPPRAKIPPMFQKAKAVADSVGKSLPQGVTHVLCDPDICRQSSPDSILRALDVQGPLPSSVVVVRLPWLSECLRLGHRVDTGPYEVDMNAAPTRLPEDGLTPGRGVKHKTCPDEATQSTEEDEGPTAPRHKRPRIIKCQDDTLLPAPPLLESREPPRRLSFPFLPPSQVWSLHDLGLLHLRVQNADTEAPRPAMALREDAVMPPSLASPAPPIASSPASLPRPSAPSPPSLPDAHSVPISPATPRAQTSSVSAPPVRIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPEGIDVSRSFFVGDAAGRPKQGPFRPRDHGDGDLKFAVNVGLAFQTPEECFHKSRSPRDAGAEAVERLRRAWVSPVRGYLREAGMGGSEAAGAACTSRCTGEGEGRRVDAPPPTLPKYGGPTCSETGPVSGDPVQPCLPTPPPSHLPPPPPLWPGSHPVGRPPCQREIHVLSHDPPAPHPRQPRHPQDSRKVPASCRPRTGSGPLHRHRRHQFSEGAS 626
            MRMAPSSGESPLFLKGVHAYFLGLSSKIAEAARKGVEKQGGKIIPPRAKIPPMFQKAKAVADSVGKSLPQGVTHVLCDPDICRQSSPDSILRALDVQGPLPSSVVVVRLPWLSECLRLGHRVDTGPYEVDMNAAPTRLPEDGLTPGRGVKHKTCPDEATQSTEEDEGPTAPRHKRPRIIKCQDDTLLPAPPLLESREPPRRLSFPFLPPSQVWSLHDLGLLHLRVQNADTEAPRPAMALREDAVMPPSLASPAPPIASSPASLPRPSAPSPPSLPDAHSVPISPATPRAQTSSVSAPPVRIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPEGIDVSRSFFVGDAAGRPKQGPFRPRDHGDGDLKFAVNVGLAFQTPEECFHKSRSPRDAGAEAVERLRRAWVSPVRGYLREAGMGGSEAAGAACTSRCTGEGEGRRVDAPPPTLPKYGGPTCSETGPVSGDPVQPCLPTPPPSHLPPPPPLWPGSHPVGRPPCQREIHVLSHDPPAPHPRQPRHPQDSRKVPASCRPRTGSGPLHRHRRHQFSEGAS
Sbjct:    1 MRMAPSSGESPLFLKGVHAYFLGLSSKIAEAARKGVEKQGGKIIPPRAKIPPMFQKAKAVADSVGKSLPQGVTHVLCDPDICRQSSPDSILRALDVQGPLPSSVVVVRLPWLSECLRLGHRVDTGPYEVDMNAAPTRLPEDGLTPGRGVKHKTCPDEATQSTEEDEGPTAPRHKRPRIIKCQDDTLLPAPPLLESREPPRRLSFPFLPPSQVWSLHDLGLLHLRVQNADTEAPRPAMALREDAVMPPSLASPAPPIASSPASLPRPSAPSPPSLPDAHSVPISPATPRAQTSSVSAPPVRIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPEGIDVSRSFFVGDAAGRPKQGPFRPRDHGDGDLKFAVNVGLAFQTPEECFHKSRSPRDAGAEAVERLRRAWVSPVRGYLREAGMGGSEAAGAACTSRCTGEGEGRRVDAPPPTLPKYGGPTCSETGPVSGDPVQPCLPTPPPSHLPPPPPLWPGSHPVGRPPCQREIHVLSHDPPAPHPRQPRHPQDSRKVPASCRPRTGSGPLHRHRRHQFSEGAS 626          
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|525581359|gb|EPS27609.1| (hypothetical protein PDE_02552 [Penicillium oxalicum 114-2])

HSP 1 Score: 150.984 bits (380), Expect = 4.527e-36
Identity = 80/194 (41.24%), Postives = 116/194 (59.79%), Query Frame = 0
Query:  288 RAQTSSVSAPPVRIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKK---------TDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERY---PEGIDVSRSFFVGDAAGRPKQGPFRPRDHGDGDLKFAVNVGLAFQTPEECFHKSRSPRDAG 469
            ++   +V+    ++A+FDLDSTLIKT+S G FA +P DWQW+ P VP  L+ L  +GY++VI SNQ+ ++ +K           LS+  ++L++V+  L +P L  + AT    + KP  G W   ++ Y     GID+ +SFFVGDAAGRP+       DH + D  FAVN G+ F+TPEE F     P+DAG
Sbjct:   66 KSVAQAVAGQARKVASFDLDSTLIKTQSGGPFAKNPNDWQWWEPGVPEKLKELDAKGYQVVIFSNQKMVKIQKDIKNGKSESKSLSNFKEKLAAVMGQLDIP-LSVYAATDNTEYRKPRLGMWREFQDDYDLDASGIDLEKSFFVGDAAGRPQ-------DHSNVDRGFAVNAGMGFKTPEEFFLSQEPPQDAG 251          
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|1204713087|gb|OWA50251.1| (Bifunctional polynucleotide phosphatase/kinase [Hypsibius dujardini])

HSP 1 Score: 145.976 bits (367), Expect = 1.808e-34
Identity = 93/252 (36.90%), Postives = 134/252 (53.17%), Query Frame = 0
Query:  261 ASLPRPSAPSPPSLPDAH-SVPISPATPRAQTSS----------VSAPP-----VRIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPEG--IDVSRSFFVGDAAGRPKQGPFRPRDHGDGDLKFAVNVGLAFQTPEECFHKSRSPRDAGAEAVERLRRAWVSPVRGYLREAGMG 494
            A++ R  +P   + PD +   P S    +AQ +S          V  P       +IA+FDLD T+I T+S   FA    DWQ+  P VP  L+SLH++G K+VI +NQ G++  KT +    Q++ +++  L +P ++   A+   +  KPAPG W    E Y EG  +D++ SF+VGDAAGRP  GP   +D    D  FA NVGL F+TPEE F  +R P        E  + +   P + YL +A MG
Sbjct:    8 AAMKRDDSPKRRATPDDNEDAPNSSKAKKAQKTSGWIDVNADLHVYNPDGLNGRKKIASFDLDGTIITTKSGKVFAKDAGDWQFLYPDVPGKLKSLHQEGVKVVIFTNQAGMKKGKTHIGEWRQKVDAILGKLAVP-VQVLVASGEGINRKPAPGMWNHFVENYNEGVQVDMTESFYVGDAAGRPAAGPKGKKDFSCSDRLFASNVGLPFKTPEE-FFLNRKP--------ENFQISAFDP-KKYLADAKMG 248          
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|1108468854|emb|CRL02547.1| (CLUMA_CG015864, isoform A [Clunio marinus])

HSP 1 Score: 144.05 bits (362), Expect = 3.462e-33
Identity = 73/176 (41.48%), Postives = 111/176 (63.07%), Query Frame = 0
Query:  291 TSSVSAPPVRIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPEGIDVSR--SFFVGDAAGRPK-QGPFRPRDHGDGDLKFAVNVGLAFQTPEECFHKSR 463
            TS ++    +IAA+D+D+T+IKT S   F  +  DWQ    ++   L+SLH+ G+KIVI +NQRGIE+ +T +  + ++L+ +   L +P  + F AT + +F KP  G W  LE  + +GI + R  SF+VGDAAGRP+ +   R +DH   D  FA+N+GL+F TPEE F  ++
Sbjct:  149 TSKLADGRSKIAAYDMDNTIIKTISGNVFPKNIDDWQLNYNNITKKLKSLHDNGFKIVIFTNQRGIETGQTTVDDMKRKLALIQQRLEVP-CQFFMATGSTIFRKPRIGMWEALETSFNDGIKIDRSQSFYVGDAAGRPEVKITKRKKDHSCADRLFAINIGLSFYTPEEHFLNAK 323          
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|298706924|emb|CBJ29751.1| (polynucleotide kinase [Ectocarpus siliculosus])

HSP 1 Score: 145.206 bits (365), Expect = 5.318e-33
Identity = 74/167 (44.31%), Postives = 102/167 (61.08%), Query Frame = 0
Query:  301 IAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPEGIDVSRS--FFVGDAAGRPKQGPFRPRDHGDGDLKFAVNVGLAFQTPEECFHKSRSP 465
            I AFD+D TLIKT+S   F  +  DWQ +   +P  LR  H++GYK+ IISNQ G+ + K D   L  ++ SVV AL +P +E + A   +   KP PG W ++   Y  G+DV ++   +VGDAAGRPKQG  + +D   GDLK A+N  + FQTPE+ F +S  P
Sbjct:  284 IVAFDMDGTLIKTKSGKRFGDAADDWQLWNGKIPTVLRKWHDRGYKVAIISNQMGVGTGKVDPRMLKAKVRSVVRALGIP-VEAYLACRDDYCRKPRPGCWEMVSTSYNGGLDVEKAACLYVGDAAGRPKQGTHK-KDFSAGDLKLALNAKIPFQTPEQFFMRSTVP 448          
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|1101372282|dbj|GAV09603.1| (hypothetical protein RvY_19109 [Ramazzottius varieornatus])

HSP 1 Score: 141.354 bits (355), Expect = 9.599e-33
Identity = 73/163 (44.79%), Postives = 101/163 (61.96%), Query Frame = 0
Query:  300 RIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHE-QGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPEG--IDVSRSFFVGDAAGRPKQGPFRPRDHGDGDLKFAVNVGLAFQTPEECF 459
            ++A FDLD TLIKTRS   FA+  +DWQ+  P VP  L+SLH+ +GYK+VI +NQ G+   KT +S   Q++ S +A + +P ++ F A+    + KPAPG W    + Y EG  +D+  S +VGDAAGRP  G    +D    D  FA+N  L F+TPEE F
Sbjct:   70 KVAGFDLDGTLIKTRSGKVFATDASDWQFLYPEVPNKLKSLHQKEGYKVVIFTNQAGMSKGKTKVSEWRQKVDSFLAKVGIP-IQIFCASGGGQYRKPAPGMWDFFVQNYNEGVAVDMENSVYVGDAAGRPNSGGKGKKDFAATDRLFALNAKLPFKTPEEYF 231          
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|642928879|ref|XP_008195599.1| (PREDICTED: uncharacterized protein F21D5.5 [Tribolium castaneum] >gi|642928881|ref|XP_008195600.1| PREDICTED: uncharacterized protein F21D5.5 [Tribolium castaneum] >gi|270009738|gb|EFA06186.1| Bifunctional polynucleotide phosphatase/kinase-like Protein [Tribolium castaneum])

HSP 1 Score: 142.124 bits (357), Expect = 1.338e-32
Identity = 74/172 (43.02%), Postives = 105/172 (61.05%), Query Frame = 0
Query:  291 TSSVSAPPVRIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPEG--IDVSRSFFVGDAAGRPKQ-GPFRPRDHGDGDLKFAVNVGLAFQTPEECF 459
            T+    P   IAAFDLD TLIKT+S   F   P DW     S+P  L+ LH++G+KIVI++NQ G+ +  + +     ++ +++A L +P  + F AT  +++ KPAPG W +L +    G  ID+ +SF+VGDAAGR K   P + +DH   D  FA+NVGL F TPEE F
Sbjct:  148 TTDNCEPQSTIAAFDLDGTLIKTKSGARFPKDPNDWVLNINSIPQKLQKLHDKGHKIVILTNQSGLSNDFSKVKGFKGKIEAIIAKLSVPA-QVFIATGKSIYRKPAPGMWNVLSQSKNGGLAIDIEKSFYVGDAAGREKNWAPKKNKDHSICDRLFALNVGLKFYTPEEYF 318          
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|752883307|ref|XP_011259349.1| (PREDICTED: uncharacterized protein F21D5.5 [Camponotus floridanus])

HSP 1 Score: 141.739 bits (356), Expect = 3.335e-32
Identity = 71/170 (41.76%), Postives = 103/170 (60.59%), Query Frame = 0
Query:  300 RIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPE---GIDVSRSFFVGDAAGRPKQ-GPFRPRDHGDGDLKFAVNVGLAFQTPEECFHKSRSP 465
            +IAA+D+D TLIKT+S   F  +  DWQ   P VP+ L+ LH  GYKIVI +NQ G+ + K  +S    ++ ++V  + +P ++ F A   +++ KP  G W  LE+        ID + SF+VGDAAGRPK   P + +DH   D   A+NVG+ F+TPEE F K ++P
Sbjct:  207 KIAAYDMDGTLIKTKSGLVFPKNCNDWQLLYPDVPSKLKQLHTNGYKIVIFTNQAGLSTGKIKISDFKLKIENIVRKISVP-IQVFIAVGKSIYRKPTIGMWESLEKELQNENITIDKANSFYVGDAAGRPKNWAPGKKKDHSSADRLMALNVGIKFETPEEHFLKHKAP 375          
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|443723915|gb|ELU12134.1| (hypothetical protein CAPTEDRAFT_157252 [Capitella teleta])

HSP 1 Score: 138.658 bits (348), Expect = 5.232e-32
Identity = 70/163 (42.94%), Postives = 95/163 (58.28%), Query Frame = 0
Query:  300 RIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSLHEQGYKIVIISNQRGIESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERYPEG--IDVSRSFFVGDAAGRPKQGPFR-PRDHGDGDLKFAVNVGLAFQTPEECF 459
            ++A FD+D TLI T++   F + P DW+W  PSVP +L+ LH  G+++   +NQ GIE  +     ++ ++  ++A L +P    F AT TN F KPA   W   EE   +G  +D   S FVGDAAGR K    R PRD    D KFA N+G+ FQTPEE F
Sbjct:   51 KVAGFDIDGTLITTKTGRKFPTGPKDWKWLYPSVPKALKQLHRDGFRVAFFTNQAGIEKLRVKPEEIMSKIDDMIAQLDIPVF-AFVATGTNHFRKPAINKWVYFEENCNQGEKVDRKESIFVGDAAGRAKGWSERKPRDFSCSDRKFAANLGVPFQTPEEYF 212          
BLAST of EWM21756.1 vs. NCBI_GenBank
Match: gi|631249183|ref|XP_007919513.1| (putative bifunctional polynucleotide phosphatase kinase protein [Phaeoacremonium minimum UCRPA7] >gi|500251813|gb|EON95684.1| putative bifunctional polynucleotide phosphatase kinase protein [Phaeoacremonium minimum UCRPA7])

HSP 1 Score: 139.043 bits (349), Expect = 7.357e-32
Identity = 92/221 (41.63%), Postives = 120/221 (54.30%), Query Frame = 0
Query:  266 PSAPSPPSLPDAHSVPISPATPRAQTSSVSAPPVRIAAFDLDSTLIKTRSEGAFASSPTDWQWFAPSVPASLRSL-HEQGYKIVIISNQRGI------------ESKKTDLSSLLQRLSSVVAALHLPGLEGFFATHTNVFYKPAPGSWYLLEERY---PEGIDVSRSFFVGDAAGRPKQ---GPFRPRDHGDGDLKFAVNVGLAFQTPEECFHKSRSPRD 467
            P   +P +L  A   P +    +    + +    RIAAFDLDSTLI + S    A SPTDW+W+  SVPA LRSL H  GY+IVI+SNQ GI            +S +  LSS  Q++S+V++ L +P L  + AT  + F KP  G W  + E Y    E +D S+S FVGDA GR  Q       P+D    D  FA NVG+ +QTPEE F   + PRD
Sbjct:   34 PDNDTPATLLVARYEPDAAKETQGTEDTSATKRRRIAAFDLDSTLITSASGKKHADSPTDWKWWDMSVPAKLRSLYHTDGYRIVILSNQGGITLHPDRNAKGPKKSIQDRLSSFKQKVSAVLSQLDIP-LTLYAATGKDGFRKPRTGMWKEVCEDYGLTQEDVDTSKSIFVGDAGGRKAQLKGATAVPKDFSCSDRNFATNVGITYQTPEEFFMGEK-PRD 252          
The following BLAST results are available for this feature:
BLAST of EWM21756.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102088|gb|EWM21756.1|0.000e+0100.00bifunctional polynucleotide phosphatase kinase [Na... [more]
gi|525581359|gb|EPS27609.1|4.527e-3641.24hypothetical protein PDE_02552 [Penicillium oxalic... [more]
gi|1204713087|gb|OWA50251.1|1.808e-3436.90Bifunctional polynucleotide phosphatase/kinase [Hy... [more]
gi|1108468854|emb|CRL02547.1|3.462e-3341.48CLUMA_CG015864, isoform A [Clunio marinus][more]
gi|298706924|emb|CBJ29751.1|5.318e-3344.31polynucleotide kinase [Ectocarpus siliculosus][more]
gi|1101372282|dbj|GAV09603.1|9.599e-3344.79hypothetical protein RvY_19109 [Ramazzottius varie... [more]
gi|642928879|ref|XP_008195599.1|1.338e-3243.02PREDICTED: uncharacterized protein F21D5.5 [Tribol... [more]
gi|752883307|ref|XP_011259349.1|3.335e-3241.76PREDICTED: uncharacterized protein F21D5.5 [Campon... [more]
gi|443723915|gb|ELU12134.1|5.232e-3242.94hypothetical protein CAPTEDRAFT_157252 [Capitella ... [more]
gi|631249183|ref|XP_007919513.1|7.357e-3241.63putative bifunctional polynucleotide phosphatase k... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8952rna8952Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications