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Properties
| Property Name | Value |
|---|
| Product | cytochrome b561 |
| Orig transcript id | gnl|cribi|Naga_100213g5.9985.mrna |
| Orig protein id | gnl|cribi|Naga_100213g5.9985 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:543904..545200 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8949 ID=rna8949|Name=rna8949|organism=Nannochloropsis gaditana|type=mRNA|length=261bp
ATGAGAGAATACATCCAAGAAATATACAAGTCCATACCATACGTATTGAT
TGCTGTGATCATCTCTAGATGCGTATCATTTGGTAGCGGACAGAGGAATT
TAGACAAAGAATTTTGGTTCCCTCAGGTACGCACTATACAATTAGATAAA
ACTTGCAAGAGATCAGGAACGAATAATCGTGCCGTTCCACAGTGGGTGAG
TGGATTGAGTTGGAAAGATTGCAGAAATTGTGCACCTCGCCGTTGGAAAC
AATGCAGATAG back to topprotein sequence of rna8949 >rna8949-protein ID=rna8949-protein|Name=rna8949|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MAMLHRITMAPRVRSLVSCRPLSTAASSPPPPSEPGAAGTILAGPIAYSK
ALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVA
PRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYY
GGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGKPSSPGSIPSAEP
SWFEKGEPLKRAGLK back to topmRNA from alignment at KK037250.1:543904..545200- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8949 ID=rna8949|Name=rna8949|organism=Nannochloropsis gaditana|type=mRNA|length=1297bp|location=Sequence derived from alignment at KK037250.1:543904..545200- (Nannochloropsis gaditana)
ATGGCAATGCTTCACCGGATCACTATGGCGCCCCGGGTGCGGTCATTGGT
ATCTTGCCGTCCGCTTTCTACGGCAGCCTCGTCGCCGCCTCCGCCGAGCG
AACCCGGTGCTGCCGGGACGATATTAGCCGGTCCTATAGCTTACAGCAAG
GCCCTGTCGCTCTTCCATTGGCTGGTTGGATTTACGATGATCGGGAGTGT
TGGCGCGGTAAGTCGAATGCCATTTCTTCTCTCCTTACGCGTCTAACCGG
GACGTTGTTGCTCGTATCCCACCCTCCCTGGCCTCGGTGCAATCCCTCCC
TTCACCATTATAATGGCGCTATGAGTATTATTTCCCCCAGCATCCGATCC
TCTGACATCTCACACGCACATTGTAGGTCCTGCAAGCTCAGCAAGTCAAA
GGCAAGGAGAAGGGTGTGTGGATGCACAGGCACAAGTCCCTTGGCCTTTT
GGCAGGCATGCTGGTGGCTCCTCGGTTTATCTTCCGCCTGACGTCCAAGG
TCCCAGCGCCTATGAAAGAATGGTCGACCATGGAGCAGCTGGCCAGCAAA
TTCACACATTTGAGTTTGTACGGCCTGATGGTGGGGATGCCGGCGACGGG
GATTGCGATGGGGTGAGTGGCGCGCGAGATCGGAGCTTCATGGGTTTCCT
CTAAATTTGAATCATGATGGTAAAGGGAAGTAATTTGAATGCCTTGGCTA
ACCCATTGCTCCAAGTGTCTTTGAGATCATACGCCAAGTTTACATGACGA
TTCTCCAAACCGCCCATGAGGAAATATCAATGGTGCGGTGGGTGGCATCC
CCCCTGTTTAGGATTGAAGTGACAAGCGTGTCTAAGCAGGACCCAGACAG
GACGATAGTACGGGGCGATATTGTGCTGTGCGAGAGAATAGGAGGTGGCA
TTGGGTTAAGCGTGATTGCAGTGTCTTCAAACGTATCCATCTGGGGACCA
TCGCATCACTCTCCATAAATTTTCACTGACGACGCGGGCATACACTGATT
ACCATGCGTGCCCCTCGATCCCTCCGACATCGCACAGCTATTACGGCGGA
AAGGGGCTTCCTTTTTTTTGGACGAAATTCGACGGTGCCGCGACCGCGAA
CGGCGAGGTGGCCAAGCAGGCGTTCAGCATCCACAAGACGATGGGGACGT
ACGGCAAGTACCTGATCCCCCTGCACATGGGGGCGGCCGGCGCACACATG
GCGCGAGGACAGGCCATCTTCTCCAGGATCAATCCCTTCCGCTGAACCGA
GCTGGTTTGAAAAAGGGGAACCGTTGAAAAGAGCTGGCTTGAAATAA back to topCoding sequence (CDS) from alignment at KK037250.1:543904..545200- >rna8949 ID=rna8949|Name=rna8949|organism=Nannochloropsis gaditana|type=CDS|length=2592bp|location=Sequence derived from alignment at KK037250.1:543904..545200- (Nannochloropsis gaditana)
GCCATCTTCTCCAGGATCAATCCCTTCCGCTGAACCGAGCTGGTTTGAAA
AAGGGGAACCGTTGAAAAGAGCTGGCTTGAAATAACTATTACGGCGGAAA
GGGGCTTCCTTTTTTTTGGACGAAATTCGACGGTGCCGCGACCGCGAACG
GCGAGGTGGCCAAGCAGGCGTTCAGCATCCACAAGACGATGGGGACGTAC
GGCAAGTCCTGCAAGCTCAGCAAGTCAAAGGCAAGGAGAAGGGTGTGTGG
ATGCACAGGCACAAGTCCCTTGGCCTTTTGGCAGGCATGCTGGTGGCTCC
TCGGTTTATCTTCCGCCTGACGTCCAAGGTCCCAGCGCCTATGAAAGAAT
GGTCGACCATGGAGCAGCTGGCCAGCAAATTCACACATTTGAGTTTGTAC
GGCCTGATGGTGGGGATGCCGGCGACGGGGATTGCGATGGGATGGCAATG
CTTCACCGGATCACTATGGCGCCCCGGGTGCGGTCATTGGTATCTTGCCG
TCCGCTTTCTACGGCAGCCTCGTCGCCGCCTCCGCCGAGCGAACCCGGTG
CTGCCGGGACGATATTAGCCGGTCCTATAGCTTACAGCAAGGCCCTGTCG
CTCTTCCATTGGCTGGTTGGATTTACGATGATCGGGAGTGTTGGCGCGGC
CATCTTCTCCAGGATCAATCCCTTCCGCTGAACCGAGCTGGTTTGAAAAA
GGGGAACCGTTGAAAAGAGCTGGCTTGAAATAACTATTACGGCGGAAAGG
GGCTTCCTTTTTTTTGGACGAAATTCGACGGTGCCGCGACCGCGAACGGC
GAGGTGGCCAAGCAGGCGTTCAGCATCCACAAGACGATGGGGACGTACGG
CAAGTCCTGCAAGCTCAGCAAGTCAAAGGCAAGGAGAAGGGTGTGTGGAT
GCACAGGCACAAGTCCCTTGGCCTTTTGGCAGGCATGCTGGTGGCTCCTC
GGTTTATCTTCCGCCTGACGTCCAAGGTCCCAGCGCCTATGAAAGAATGG
TCGACCATGGAGCAGCTGGCCAGCAAATTCACACATTTGAGTTTGTACGG
CCTGATGGTGGGGATGCCGGCGACGGGGATTGCGATGGGATGGCAATGCT
TCACCGGATCACTATGGCGCCCCGGGTGCGGTCATTGGTATCTTGCCGTC
CGCTTTCTACGGCAGCCTCGTCGCCGCCTCCGCCGAGCGAACCCGGTGCT
GCCGGGACGATATTAGCCGGTCCTATAGCTTACAGCAAGGCCCTGTCGCT
CTTCCATTGGCTGGTTGGATTTACGATGATCGGGAGTGTTGGCGCGGCCA
TCTTCTCCAGGATCAATCCCTTCCGCTGAACCGAGCTGGTTTGAAAAAGG
GGAACCGTTGAAAAGAGCTGGCTTGAAATAACTATTACGGCGGAAAGGGG
CTTCCTTTTTTTTGGACGAAATTCGACGGTGCCGCGACCGCGAACGGCGA
GGTGGCCAAGCAGGCGTTCAGCATCCACAAGACGATGGGGACGTACGGCA
AGTCCTGCAAGCTCAGCAAGTCAAAGGCAAGGAGAAGGGTGTGTGGATGC
ACAGGCACAAGTCCCTTGGCCTTTTGGCAGGCATGCTGGTGGCTCCTCGG
TTTATCTTCCGCCTGACGTCCAAGGTCCCAGCGCCTATGAAAGAATGGTC
GACCATGGAGCAGCTGGCCAGCAAATTCACACATTTGAGTTTGTACGGCC
TGATGGTGGGGATGCCGGCGACGGGGATTGCGATGGGATGGCAATGCTTC
ACCGGATCACTATGGCGCCCCGGGTGCGGTCATTGGTATCTTGCCGTCCG
CTTTCTACGGCAGCCTCGTCGCCGCCTCCGCCGAGCGAACCCGGTGCTGC
CGGGACGATATTAGCCGGTCCTATAGCTTACAGCAAGGCCCTGTCGCTCT
TCCATTGGCTGGTTGGATTTACGATGATCGGGAGTGTTGGCGCGGCCATC
TTCTCCAGGATCAATCCCTTCCGCTGAACCGAGCTGGTTTGAAAAAGGGG
AACCGTTGAAAAGAGCTGGCTTGAAATAACTATTACGGCGGAAAGGGGCT
TCCTTTTTTTTGGACGAAATTCGACGGTGCCGCGACCGCGAACGGCGAGG
TGGCCAAGCAGGCGTTCAGCATCCACAAGACGATGGGGACGTACGGCAAG
TCCTGCAAGCTCAGCAAGTCAAAGGCAAGGAGAAGGGTGTGTGGATGCAC
AGGCACAAGTCCCTTGGCCTTTTGGCAGGCATGCTGGTGGCTCCTCGGTT
TATCTTCCGCCTGACGTCCAAGGTCCCAGCGCCTATGAAAGAATGGTCGA
CCATGGAGCAGCTGGCCAGCAAATTCACACATTTGAGTTTGTACGGCCTG
ATGGTGGGGATGCCGGCGACGGGGATTGCGATGGGATGGCAATGCTTCAC
CGGATCACTATGGCGCCCCGGGTGCGGTCATTGGTATCTTGCCGTCCGCT
TTCTACGGCAGCCTCGTCGCCGCCTCCGCCGAGCGAACCCGGTGCTGCCG
GGACGATATTAGCCGGTCCTATAGCTTACAGCAAGGCCCTGTCGCTCTTC
CATTGGCTGGTTGGATTTACGATGATCGGGAGTGTTGGCGCG back to top
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