EWM21751.1, cds8919 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|585102083|gb|EWM21751.1| (cytochrome b561 [Nannochloropsis gaditana]) HSP 1 Score: 431.409 bits (1108), Expect = 6.903e-153 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MAMLHRITMAPRVRSLVSCRPLSTAASSPPPPSEPGAAGTILAGPIAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGKPSSPGSIPSAEPSWFEKGEPLKRAGLK 215
MAMLHRITMAPRVRSLVSCRPLSTAASSPPPPSEPGAAGTILAGPIAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGKPSSPGSIPSAEPSWFEKGEPLKRAGLK
Sbjct: 1 MAMLHRITMAPRVRSLVSCRPLSTAASSPPPPSEPGAAGTILAGPIAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGKPSSPGSIPSAEPSWFEKGEPLKRAGLK 215
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|553191094|ref|XP_005855319.1| (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Nannochloropsis gaditana CCMP526] >gi|422293738|gb|EKU21038.1| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 331.257 bits (848), Expect = 4.763e-111 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 27 SSPPPPSEPGAAGTILAGPIAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGK 188
SSPPPPSEPGAAGTILAGPIAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGK
Sbjct: 169 SSPPPPSEPGAAGTILAGPIAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGK 330
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|1072236047|gb|OEU20775.1| (Ni_hydr_CYTB-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 151.369 bits (381), Expect = 1.200e-42 Identity = 76/151 (50.33%), Postives = 101/151 (66.89%), Query Frame = 0
Query: 47 AYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEW---STMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWT------KFDGAATANGEVAKQAFSIHKTMGTYGK 188
+Y+ S HWL TMIG VG VL+AQ+ ++KG WM RHKSLGLL GM++APR +R+ ++ ++E S++E + +K +H LY M MPA+GIAMGYYGGKGLPFF T K D + GE+AKQ++ IHKT+GTYGK
Sbjct: 7 SYTVTASSLHWLSAGTMIGCVGCVLKAQESPKEDKGTWMFRHKSLGLLTGMIIAPRLAYRIFNRSAYKIEELAGASSIEHILAKISHGGLYAFMAIMPASGIAMGYYGGKGLPFFTTTLPGVVKTDENKKSTGEIAKQSYKIHKTLGTYGK 157
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|929771268|ref|XP_014160567.1| (hypothetical protein SARC_01202 [Sphaeroforma arctica JP610] >gi|906958504|gb|KNC86665.1| hypothetical protein SARC_01202 [Sphaeroforma arctica JP610]) HSP 1 Score: 146.747 bits (369), Expect = 2.026e-40 Identity = 82/162 (50.62%), Postives = 103/162 (63.58%), Query Frame = 0
Query: 48 YSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGKPSSPGSIPSAEPSWFEKGEPL 209
YSKA+S HWL ++G VG VL AQ +KGK +G M HKSLGLL G++ APR LTS+ PA S LA+ TH LYG ++ MPATG+AMGYYGG GLPFFWTK GAA A+ ++ AF +HK +G YGK P + +A S F +GE +
Sbjct: 52 YSKAMSYMHWLTVPAVLGCVGTVLYAQTLKGKPRGNMMFWHKSLGLLTGIIAAPRVAVMLTSRKPAAFNTNSIKAALAAA-THYGLYGFLIIMPATGVAMGYYGGFGLPFFWTKLSGAAEADKSISGPAFKVHKFVGYYGKFLIPLHVGAAGFS-FARGEAI 211
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|224008779|ref|XP_002293348.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970748|gb|EED89084.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 145.591 bits (366), Expect = 2.108e-40 Identity = 78/152 (51.32%), Postives = 100/152 (65.79%), Query Frame = 0
Query: 47 AYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTS----KVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATAN------GEVAKQAFSIHKTMGTYGK 188
AYS A S +HW+V ++GS+ +VL+ QQ +EKG WM RHKSLGLL G++VAPR +R+ + ++ P +LA +H LYG M MPATGIAMGYYGG GLPFFWT GA+ + G +AKQ+FSIHKT+GTYGK
Sbjct: 6 AYSIAASYYHWVVAVPLMGSIASVLKCQQSPKEEKGKWMFRHKSLGLLTGLVVAPRLGYRIFNAAKYQIGHPAGTGPIEGKLADA-SHFLLYGFMTIMPATGIAMGYYGGNGLPFFWTTIPGASRTDENKATYGNIAKQSFSIHKTLGTYGK 156
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|1210514497|dbj|GAX26606.1| (hypothetical protein FisN_21Lh073 [Fistulifera solaris]) HSP 1 Score: 144.436 bits (363), Expect = 4.774e-40 Identity = 76/150 (50.67%), Postives = 92/150 (61.33%), Query Frame = 0
Query: 46 IAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAP---MKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGKPSSP 192
+AY+ FHW+ +IG VG VL+AQQ +EKG WM RHKSLGLL GM+VAPR +R+ + + S+ E + +K H LY M MPATGIAMG YGGKGLPFFWT F G NG +AK F IHK +G YGK P
Sbjct: 6 MAYAMGARWFHWMTAVPLIGCVGTVLKAQQAPKEEKGKWMFRHKSLGLLTGMIVAPRVAYRIMGRSGYNVIGLPGTSSTESVLAKAGHAFLYVFMTVMPATGIAMGLYGGKGLPFFWTTFAGFEQTNGTIAKNTFQIHKQLGVYGKYMIP 155
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|1210517842|dbj|GAX23243.1| (hypothetical protein FisN_21Hh073 [Fistulifera solaris]) HSP 1 Score: 143.665 bits (361), Expect = 1.042e-39 Identity = 75/150 (50.00%), Postives = 92/150 (61.33%), Query Frame = 0
Query: 46 IAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAP---MKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTYGKPSSP 192
+AY+ FHW+ +IG VG VL+AQQ ++KG WM RHKSLGLL GM+VAPR +R+ + + S+ E + +K H LY M MPATGIAMG YGGKGLPFFWT F G NG +AK F IHK +G YGK P
Sbjct: 6 MAYAMGARWFHWMTAVPLIGCVGTVLKAQQAPKEDKGKWMFRHKSLGLLTGMIVAPRVAYRIMGRSGYNVIGLPGTSSTESVLAKAGHAFLYVFMTVMPATGIAMGLYGGKGLPFFWTTFAGFEQTNGTIAKNTFQIHKQLGVYGKYMIP 155
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|514681116|ref|XP_004988144.1| (hypothetical protein PTSG_10608 [Salpingoeca rosetta] >gi|326434784|gb|EGD80354.1| hypothetical protein PTSG_10608 [Salpingoeca rosetta]) HSP 1 Score: 122.865 bits (307), Expect = 1.890e-30 Identity = 66/138 (47.83%), Postives = 81/138 (58.70%), Query Frame = 0
Query: 48 YSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKEK-GVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMG 184
YS+ + HWLVG M+ V V AQ + K+K G +M HKS LL LV PR RL SK+P + S EQLA F+H +Y M+GMP TGI MGY+GGKGLPF+ G T N +VA AF +HK MG
Sbjct: 72 YSRRMQALHWLVGAGMLTCVATVKMAQWTEDKKKKGQYMMIHKSTALLVAALVVPRVAIRLASKMPKALPGTSKFEQLAGSFSHFLMYVAMIGMPVTGITMGYFGGKGLPFYGAHIPGTDTPNKKVAGTAFKVHKKMG 209
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|255081294|ref|XP_002507869.1| (predicted protein [Micromonas commoda] >gi|226523145|gb|ACO69127.1| predicted protein [Micromonas commoda]) HSP 1 Score: 112.079 bits (279), Expect = 9.545e-27 Identity = 68/169 (40.24%), Postives = 94/169 (55.62%), Query Frame = 0
Query: 32 PSEPG-------AAGTILAGPIA----YSKALSLFHWLVGFTMIGSVGAVLQAQQV---KGKEKGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKFDGAATANGEVAKQAFSIHKTMGTY 186
P+ PG +AGTI A Y+ L HWL+ +G+ V A + + EKG +M HKSLGL L PR RLT+K+PA + S EQ+A++ HL +YG+M MP +G MGYYGG+GLPFF GA+ +G++A +AF +HK +G Y
Sbjct: 57 PANPGTSRGFAASAGTIAEAASALEQQYATPLQALHWLIAGGTVGTFAFVQLAMNLPKDQAAEKGRFMMLHKSLGLCVLGLTIPRLALRLTTKIPAAV-PGSKAEQIAAQLGHLVMYGMMTAMPVSGFIMGYYGGRGLPFFGYTIPGASKRDGKLAGRAFKLHKQLGWY 224
BLAST of EWM21751.1 vs. NCBI_GenBank
Match: gi|1183426229|gb|ORY50533.1| (hypothetical protein BCR33DRAFT_846987 [Rhizoclosmatium globosum]) HSP 1 Score: 103.99 bits (258), Expect = 1.943e-24 Identity = 60/145 (41.38%), Postives = 84/145 (57.93%), Query Frame = 0
Query: 42 LAGPIAYSKALSLFHWLVGFTMIGSVGAVLQAQQVKGKE-KGVWMHRHKSLGLLAGMLVAPRFIFRLTSKVPAPMKEWSTMEQLASKFTHLSLYGLMVGMPATGIAMGYYGGKGLPFFWTKF-DGAATANGEVAKQAFSIHKTMG 184
+A P+AYS+A+S HW +G M+G +G V +Q + K K +M+ HKSL ++ V R R SK+PA + + Q A H++LYG M+GMPA+G+AMGYY G G+PFF F GA T N + Q + H MG
Sbjct: 1 MAAPLAYSRAMSAMHWGIGGLMLGCIGTVKASQNTQDKALKAKYMNWHKSLAVIVAFAVPARIGLRFASKIPAHIPGPKVI-QWAGDAGHIALYGFMIGMPASGLAMGYYSGYGVPFFSGTFLKGAETPNKALGGQLYFAHNIMG 144 The following BLAST results are available for this feature:
BLAST of EWM21751.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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