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Properties
| Property Name | Value |
|---|
| Product | 26s proteasome non-atpase regulatory subunit 9 |
| Orig transcript id | gnl|cribi|Naga_100213g2.9992.mrna |
| Orig protein id | gnl|cribi|Naga_100213g2.9992 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:540305..541622 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8946 ID=rna8946|Name=rna8946|organism=Nannochloropsis gaditana|type=mRNA|length=945bp
CAGGGATTTGGGGCTACAACGGACTGAGACATTGCATTGTCTCAGCAGGG
TTCCTCCTACAACGGACCGACAGACAAAATCATGCGCCTGCGAGTGAAAC
CGGGTCTTAGGCATTGCTTTGTCGCCCTCCCTTCAAGTTTCACTCATCGC
CTCCGCGAAGACGCCGCTGTATCTTCCGGTACGGTGGTACTGGAACTGCA
GTGGACGGGACTTGACGGCGAGAATTGTCGGGCTTTCGTCTGTTGGAACG
GGGCCGTCTCAGGTGGCAAGATACGAGGGAGCGATGCGGGCAATGCTGAG
GTCTTGGAGATGGATGAGGCATTCGCGCGATGCTTGGGCTTGGGGCCAAT
GCTGGCAGTCTACAGAAATGTGCAGCTACGTGTCCAACGGGCATTGGTGG
TGGAGTTCCCACGCCGGGTGGAATTGGAGCCTTGCACGCCAGACGACTGG
GAGCTGGTGGAACTGCACGCAGGCTATTTGGAAGCGGAGATCTTAAGACA
AATTGCCGTGGTGTACGCGGGTCAAACCCTGCCGATCTGGATCCACGCGC
AGAAGCTCGTGCAATTGCGTGTCGTCAATGTGTCGTCTAGGGCTCCGCAA
CGCCTGAGCACTTCCACGGAAGTTGTGGTCGCTCCCTGTCTCCGGCCCCC
GCCAGTGGCCCATGCCCACCCCTTCCCGGAAGATGACGCCCCCCCCGTCT
TTCTTGCGAGCCCGCCTTTGCGCGTGCAGCCCCAGCCTGCACGTCGCCAG
CACTGGCCCTTCCAGGCCCAGACGGTGATCGCACTCCACCCCTCCACCTA
CCGAGCGGCCTTGCGGAACCCAGCACCCGCTACCGACCAGGCCTTGGCAC
GGATAAGCCAGCGAGTCAGAGGAAGGGGGAATAGGGAGGGTCAGAGGGAG
GGGTGTGGGAGCCTGGTGACGGGCTTCGAGGAAGTGGGGCCTCGG back to topprotein sequence of rna8946 >rna8946-protein ID=rna8946-protein|Name=rna8946|organism=Nannochloropsis gaditana|type=polypeptide|length=261bp
MHYDARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVD
AEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSA
GVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSME
EGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAA
IVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRG
LLGCHLTAVSS back to topmRNA from alignment at KK037250.1:540305..541622+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8946 ID=rna8946|Name=rna8946|organism=Nannochloropsis gaditana|type=mRNA|length=1318bp|location=Sequence derived from alignment at KK037250.1:540305..541622+ (Nannochloropsis gaditana)
TGCGAAGTTTTCTGCGGTCTCACTCGCATCATAATACTCACCGCAGGAAA
AATGCATTATGACGCGCGCtccgagctggaggaggtgagtcGGAGGGTGG
TTGTGTTCATAAAGGAATGAATGGCATAGGCGTAGTGCGTCCttagggtg
gggaggtctCGGCGAGCTTGCAGCACCTGGAACAAGTACCCAACACCCTC
TTGCGTCACCAAAACCGGACAGCTCATTAAAGAACGTGATAATCTTGAGA
CCGAGGCTGCAGTCATCAAGGATTTCCTAACTTCACCTGGGCCTGGCGGG
GCTGCCCCCCCGGGCTTGGGCGGAGTGCCGCTTGTGGACGCAGAGGGATT
TCCAAGAGCGGATATCGATGTTTGGGATGTACGGGTGAAACGAAATCGAC
TGGCATGCATCGACACAGATCATGCAGAGCTCATGAAACGGATCGAGGAG
CTGGTTCAACGGCTTCATCAGGAGGCCAAGACCAGCGCGGGAGTGCGAGG
AATGAGCAACAATTGGAGCACAAGTAGCAGCACTGGGAGGGATATTGGGG
CTCTATCATACACCCGCACGGAGGAATCTCAAGTCGAGACAGTTCCTAAG
CCTACCGCATGTATGGAGGTGGAAAACAGGTccatggaagaaggaggggg
accGTCACGTCAACAGCCATTCGCGGTCATAGATCAAGTGTTTCGTGCCT
CTCCagcagaggaagcggggTTGAAAAATGGTGATCTGCTCGTCTCTCTG
GGCACTGTGAATGCCCAGAATCACAACAACTTTGCGGCCATCGTAGCCTT
GGTCCAGGAAAACGAGGGGCGCGTGCTTCGGGTGGAAGTGCAACGACCCC
AAGAAGCTTCGGCCGGAGGCCCGTCGTCTGcgccgaggaaggagaccgTG
GTCATGTCATTGATCCCACACGCATGGAGCGGGCGAGGACTGCTCGGATG
TCATCTGACAGCCGTGTCGTCTTGAGGGTCctggcagggcgggggaggcc
gggaacAAAGCGGGATGAGACACGGGGAGGATGTTGTACAGGGGCACGTT
GTCGAAAAAGGGCCGTCCGGAGGGGAGTGGAAGTGGTTGGAAGGGTCTCC
AATACCACGTTTTCCCAGCTCGAAGCAAGGAATTGTGCACGCCTGTCATG
GAGGCCTTACTTTTCCTATGTACGAGAAGTTTGCGGAGACAAAAGGGCCC
CGGGACGCACCAGGAGAGACCGAGACGTAAGGGAACAGCAAAATAGGTCC
ATGGGTGCCTTGAATACCCCACAAGAGCCATTAAAAGTCTAAGGCAGCAT
AACTAGACAGCCCAGACC back to topCoding sequence (CDS) from alignment at KK037250.1:540305..541622+ >rna8946 ID=rna8946|Name=rna8946|organism=Nannochloropsis gaditana|type=CDS|length=1572bp|location=Sequence derived from alignment at KK037250.1:540305..541622+ (Nannochloropsis gaditana)
ATGCATTATGACGCGCGCtccgagctggaggagCTCATTAAAGAACGTGA
TAATCTTGAGACCGAGGCTGCAGTCATCAAGGATTTCCTAACTTCACCTG
GGCCTGGCGGGGCTGCCCCCCCGGGCTTGGGCGGAGTGCCGCTTGTGGAC
GCAGAGGGATTTCCAAGAGCGGATATCGATGTTTGGGATGTACGGGTGAA
ACGAAATCGACTGGCATGCATCGACACAGATCATGCAGAGCTCATGAAAC
GGATCGAGGAGCTGGTTCAACGGCTTCATCAGGAGGCCAAGACCAGCGCG
GGAGTGCGAGGAATGAGCAACAATTGGAGCACAAGTAGCAGCACTGGGAG
GGATATTGGGGCTCTATCATACACCCGCACGGAGGAATCTCAAGTCGAGA
CAGTTCCTAAGCCTACCGCATGTATGGAGGTGGAAAACAGGTccatggaa
gaaggagggggaccGTCACGTCAACAGCCATTCGCGGTCATAGATCAAGT
GTTTCGTGCCTCTCCagcagaggaagcggggTTGAAAAATGGTGATCTGC
TCGTCTCTCTGGGCACTGTGAATGCCCAGAATCACAACAACTTTGCGGCC
ATCGTAGCCTTGGTCCAGGAAAACGAGGGGCGCGTGCTTCGGGTGGAAGT
GCAACGACCCCAAGAAGCTTCGGCCGGAGGCCCGTCGTCTGcgccgagga
aggagaccgTGGTCATGTCATTGATCCCACACGCATGGAGCGGGCGAGGA
CTGCTCGGATGTCATCTGACAGCCGTGTCGTCTTGAATGCATTATGACGC
GCGCtccgagctggaggagCTCATTAAAGAACGTGATAATCTTGAGACCG
AGGCTGCAGTCATCAAGGATTTCCTAACTTCACCTGGGCCTGGCGGGGCT
GCCCCCCCGGGCTTGGGCGGAGTGCCGCTTGTGGACGCAGAGGGATTTCC
AAGAGCGGATATCGATGTTTGGGATGTACGGGTGAAACGAAATCGACTGG
CATGCATCGACACAGATCATGCAGAGCTCATGAAACGGATCGAGGAGCTG
GTTCAACGGCTTCATCAGGAGGCCAAGACCAGCGCGGGAGTGCGAGGAAT
GAGCAACAATTGGAGCACAAGTAGCAGCACTGGGAGGGATATTGGGGCTC
TATCATACACCCGCACGGAGGAATCTCAAGTCGAGACAGTTCCTAAGCCT
ACCGCATGTATGGAGGTGGAAAACAGGTccatggaagaaggagggggacc
GTCACGTCAACAGCCATTCGCGGTCATAGATCAAGTGTTTCGTGCCTCTC
CagcagaggaagcggggTTGAAAAATGGTGATCTGCTCGTCTCTCTGGGC
ACTGTGAATGCCCAGAATCACAACAACTTTGCGGCCATCGTAGCCTTGGT
CCAGGAAAACGAGGGGCGCGTGCTTCGGGTGGAAGTGCAACGACCCCAAG
AAGCTTCGGCCGGAGGCCCGTCGTCTGcgccgaggaaggagaccgTGGTC
ATGTCATTGATCCCACACGCATGGAGCGGGCGAGGACTGCTCGGATGTCA
TCTGACAGCCGTGTCGTCTTGA back to top
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