EWM21758.1, cds8916 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|585102090|gb|EWM21758.1| (26s proteasome non-atpase regulatory subunit 9 [Nannochloropsis gaditana]) HSP 1 Score: 535.413 bits (1378), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query: 1 MHYDARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHLTAVSS 261
MHYDARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHLTAVSS
Sbjct: 1 MHYDARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHLTAVSS 261
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|553191114|ref|XP_005855324.1| (26s proteasome non-atpase regulatory subunit [Nannochloropsis gaditana CCMP526] >gi|422293743|gb|EKU21043.1| 26s proteasome non-atpase regulatory subunit [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 230.335 bits (586), Expect = 4.590e-74 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
Query: 149 MEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHLTAVSS 261
MEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHLTAVSS
Sbjct: 1 MEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHLTAVSS 113
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|403361144|gb|EJY80269.1| (Proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 139.043 bits (349), Expect = 1.142e-36 Identity = 92/251 (36.65%), Postives = 137/251 (54.58%), Query Frame = 0
Query: 6 RSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHL 256
R L +++KE+D +E + I++FL +P PG+ G LVDAEGFPRADID+++VR RNRLAC+ TDH +MK+IEE + LH + KT + + G +I + S E+ ++ET+ + ++ + + E + PFA I V SPA+++GLK GD + G +N NH N AIV LV+ + ++V+V R + GG E +S +P W GRG LGC L
Sbjct: 14 REALMKIMKEKDEIEKQIFDIREFLETP-----PMPGVKGT-LVDAEGFPRADIDLFEVRKFRNRLACLQTDHCTVMKQIEEGLLNLHDDYKT-----------NNINEPGEEIKSSS---NEDVKMETMSQTSSASQSQMMQNE------VKIPFAWISDVIEGSPAQDSGLKMGDAIYRFGNINHDNHENLNAIVELVKSSLNNPIQVKVLR--KNLFGG------SEDKEISFVPREWGGRGYLGCAL 230
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|673053505|ref|XP_008880713.1| (hypothetical protein H310_14601 [Aphanomyces invadans] >gi|574463578|gb|ETV90643.1| hypothetical protein H310_14601 [Aphanomyces invadans]) HSP 1 Score: 132.494 bits (332), Expect = 2.878e-34 Identity = 89/249 (35.74%), Postives = 127/249 (51.00%), Query Frame = 0
Query: 9 LEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHLT 257
+EL KER ++ E +I + LTS G P GL G PLVD EGFPR+DIDV+ VR KR+R AC+ D MK IE+++ ++ E K +ST + G LS++ + K TA + G PFA ++ + SP+ EAGL+ GDL++ GT A+NH AAI +V N + V VQR P + ++SL+PH+W+G G+LGCH+
Sbjct: 4 FQELDKERAAIDAEIQLIAEELTS----GPNPIGLKG-PLVDEEGFPRSDIDVYTVRHKRHRFACLQNDLKWKMKEIEDVMTSIYAEQKAQ-----QPPTLKQPNSTAK--GTLSHSTVHAIEAN---KGTAL----PVKLLGNSGVDSAIPFARVESIQDGSPSSEAGLQVGDLILQFGTAKAENHRELAAIRDIVGRNINTTIEVIVQR-----------QPTADLYLLSLVPHSWNGPGVLGCHIV 222
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|570338021|gb|ETO85969.1| (hypothetical protein F444_00427 [Phytophthora parasitica P1976]) HSP 1 Score: 131.724 bits (330), Expect = 5.322e-34 Identity = 96/253 (37.94%), Postives = 132/253 (52.17%), Query Frame = 0
Query: 4 DARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHL 256
D SE E +K ++ +E E + LTS PGL G PLVDAEGFPRADIDV+ VR R+ LA TDH MK+IEEL+ R+ EA++S R + N+ +T+ D A R ES+ + + + + E R + PFAV++ V R SPAE AGL+ D ++ GT +A NH AA+ +VQ N G +RV V+R + E + + L P W G G+LGC L
Sbjct: 3 DVVSEYEAAVKTKEAIEAEIEAVVAELTS-----GNNPGLDG-PLVDAEGFPRADIDVYRVRQLRHTLALKQTDHQTTMKKIEELLPRVF-EARSSGKQREVKNSTTTTDPQVND--ATERMRKLESEWK---QKMSEVTPEERDL---------LPFAVVESVQRESPAELAGLQAQDHVLRFGTADASNHRELAAVRDIVQRNIGSGIRVVVRR-------------QTEILALELTPQTWRGPGVLGCLL 221
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|568029468|gb|ETM03394.1| (hypothetical protein L917_00376 [Phytophthora parasitica]) HSP 1 Score: 131.724 bits (330), Expect = 6.248e-34 Identity = 95/253 (37.55%), Postives = 133/253 (52.57%), Query Frame = 0
Query: 4 DARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHL 256
D SE E +K ++ +E E + LTS PGL G PLVDAEGFPRADIDV+ VR R+ LA TDH MK+IEEL+ R+ EA++S + + N+ +T+ D A R ES+ + + + ++ E R + PFAV++ V R SPAE AGL+ D ++ GT +A NH AA+ +VQ N G +RV V+R + E + + L P W G G+LGC L
Sbjct: 3 DVVSEYEAAVKTKEAIEAEIEAVVAELTS-----GNNPGLDG-PLVDAEGFPRADIDVYRVRQLRHTLALKQTDHQTTMKKIEELLPRVF-EARSSGKQQEVKNSTTTTDPQVND--ATERMRKLESEWK---QKMSEVKPEERDL---------LPFAVVESVQRESPAELAGLQAQDHVLRFGTADASNHRELAAVRDIVQRNIGSSIRVVVRR-------------QTEILALELTPQTWRGPGVLGCLL 221
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|1025032051|ref|XP_016325202.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 isoform X2 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 130.183 bits (326), Expect = 1.462e-33 Identity = 84/245 (34.29%), Postives = 123/245 (50.20%), Query Frame = 0
Query: 12 LIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHL 256
LIK + ++E + D L + G G AP LVD EGFPRAD+D++ VR R+ ++C+ DH +M IEE + +LH A S +D+ T+TE V +PTA + P+ PFA++D V + SPA +AGL+ GD ++ G+VN QN N + ++VQ +EG+ LRV + R + V ++L P WSGRGLLGC+L
Sbjct: 22 LIKRKGDIEEQIKAYHDMLQTAGVGMDAP-------LVDVEGFPRADVDLYKVRTARHNISCLQNDHKAIMVEIEEALHKLHATA---------------SVKPEKDV-----TKTE------VTEPTASL------------PA---PFALVDTVTQGSPAFQAGLRVGDEIIEFGSVNTQNFRNLHDVASVVQHSEGKSLRVGLLRS-------------GQEVHLNLTPKQWSGRGLLGCNL 205
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|566034322|gb|ETI57233.1| (hypothetical protein F443_00431 [Phytophthora parasitica P1569]) HSP 1 Score: 130.568 bits (327), Expect = 1.567e-33 Identity = 95/253 (37.55%), Postives = 133/253 (52.57%), Query Frame = 0
Query: 4 DARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHL 256
D SE E +K ++ +E E + LTS PGL G PLVDAEGFPRADIDV+ VR R+ LA TDH MK+IEEL+ R+ EA++S + + N+ +T+ D A R ES+ + + + ++ E R + PFAV++ V R SPAE AGL+ D ++ GT +A NH AA+ +VQ N G +RV V+R + E + + L P W G G+LGC L
Sbjct: 3 DVVSEYEAAVKAKEAIEAEIEAVVAELTS-----GNNPGLDG-PLVDAEGFPRADIDVYRVRQLRHTLALKQTDHQTTMKKIEELLPRVF-EARSSGKQQEVKNSTTTTDPQVND--ATERMRKLESEWK---QKMSEVKPEERDL---------LPFAVVESVQRESPAELAGLQAQDHVLRFGTADASNHRELAAVRDIVQRNIGSGIRVVVRR-------------QTEILALELTPQTWRGPGVLGCLL 221
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|970662300|gb|KUF99700.1| (hypothetical protein AM588_10010148 [Phytophthora nicotianae]) HSP 1 Score: 130.183 bits (326), Expect = 2.113e-33 Identity = 94/253 (37.15%), Postives = 133/253 (52.57%), Query Frame = 0
Query: 4 DARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHL 256
D SE E +K ++ +E E + LTS PGL G PLVDAEGFPRADIDV+ VR R+ LA TDH MK+IEEL+ R+ +A++S + + N+ +T+ D A R ES+ + + + ++ E R + PFAV++ V R SPAE AGL+ D ++ GT +A NH AA+ +VQ N G +RV V+R + E + + L P W G G+LGC L
Sbjct: 3 DVVSEYEAAVKAKEAIEAEIEAVVAELTS-----GNNPGLDG-PLVDAEGFPRADIDVYRVRQLRHTLALKQTDHQTTMKKIEELLPRVF-DARSSGKQQEVKNSTTTTDPQVND--ATERMRKLESEWK---QKMSEVKPEERDL---------LPFAVVESVQRESPAELAGLQAQDHVLRFGTADASNHRELAAVRDIVQRNIGSSIRVVVRR-------------QTEILALELTPQTWRGPGVLGCLL 221
BLAST of EWM21758.1 vs. NCBI_GenBank
Match: gi|570998842|gb|ETP54967.1| (hypothetical protein F442_00422 [Phytophthora parasitica P10297]) HSP 1 Score: 130.183 bits (326), Expect = 2.229e-33 Identity = 94/253 (37.15%), Postives = 133/253 (52.57%), Query Frame = 0
Query: 4 DARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVRGMSNNWSTSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHL 256
D SE E +K ++ +E E + LTS PGL G PLVDAEGFPRADIDV+ VR R+ LA TDH MK+IEEL+ R+ +A++S + + N+ +T+ D A R ES+ + + + ++ E R + PFAV++ V R SPAE AGL+ D ++ GT +A NH AA+ +VQ N G +RV V+R + E + + L P W G G+LGC L
Sbjct: 3 DVVSEYEAAVKTKEAIEAEIEAVVAELTS-----GNNPGLDG-PLVDAEGFPRADIDVYRVRQLRHTLALKQTDHQTTMKKIEELLPRVF-DARSSGKQQEVKNSTTTTDPQVND--ATERMRKLESEWK---QKMSEVKPEERDL---------LPFAVVESVQRESPAELAGLQAQDHVLRFGTADATNHRELAAVRDIVQRNIGSSIRVVVRR-------------QTEILALELTPQTWRGPGVLGCLL 221 The following BLAST results are available for this feature:
BLAST of EWM21758.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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