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Properties
| Property Name | Value |
|---|
| Product | peroxisomal biogenesis factor 1 |
| Orig transcript id | gnl|cribi|Naga_100213g1.9988.mrna |
| Orig protein id | gnl|cribi|Naga_100213g1.9988 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:539198..540142 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8945 ID=rna8945|Name=rna8945|organism=Nannochloropsis gaditana|type=mRNA|length=1738bp
ATGAGGGTGGCGGCGGGGGGGGCAAGGAGGCTGTGGCAGGCGGGACCCGG
CGCCCAGGGAGGGAGGGAAGGAGCGACGGAGGTAGGGGAGGAGCCGGGCG
CGGGGCAAACAATGTCACCTGTCGCAGGGGAAGGGAAGGGGGAAAATCAC
ATCGAGGCTGGCACGTGGTCCAAGCCGCCATCCGAGGCCTGGGTCATCTT
GGGAGCTGCCGCCGTGAGTAGTGCGGTCGCCCTGGTCGCCACCGTCCGGG
ACCCCAGCCTCCTCCACGCTTCCCTTCGTCGGCCCGGCGGGGTGGAGGGT
TTAGTGGAAATCCCCCCCCTGGACGCCAAGGCCCGCGAGGCAATCTTGGC
CGCGCTCCTCGCCCAGCACTCCAGCAACCATTCTTTTCCCTCCTCACCCT
CCCTTGGGCCCTCCGCCCCGCCCTCCCCTGCCCGGCCTGCGCCCGACCGG
CCCCTGTCCGTTGTCCCCGGCGTCGACGTGGCCGAGCTGGCCGCCCGGTT
GGAGGGATGCACATCCCTCGACCTGGAAGTCCTGGTTACCCGGATCCTCC
ACGCGGCCGTCGGGCGCTCGTTGCGCGAGCTTGGTGACTCGGCCTCCGCC
TCGACCGTCGATCCCCGCCCGGCCGTCCTCCCTGCCGACGTCACTGACGC
CTTGGAAGGCTTTAGCGCTGCCTCCCATCGGAACGCCCGCCTCTCTTCCT
CCGGCACGAGCTGGGCCGACGTGGGTGGTCTGGAAGAGATCAAAAACGAA
GTGCGCGAGATTTTGGAGATGCCCGTAAAGTTCGCCCCTCTGTACGCCCG
CCTTCCCACCCGCCTGCCCACAGGTCTGTTGCTGCACGGGCCACCGGGGT
GCGGTAAAACCCTGCTGGCAGGGGCGGTGGCGCGGGAGTGTGGGCTGAAT
TTCATCTCGATCAAGGGGCCTGAGGTCTTGGACAAGTTCATCGGAGCCAG
CGAACAGGCGGTTCGGGCCCTCTTTGCCAGGGCCACGGCCGCCGCGCCTT
GCCTCCTGTTTTTCGACGAATTCGAAGCCCTGGCGCCGCGGCGTGGGAGC
GACAACACGGGCGTCACGGACCGGGTGGTGAACCAGTTGCTCACTTTCTT
GGACGGGGTGGAGGGCCGGACGGGTGTCTACGTGATGGGGGCGACTTCCC
GACCCGACCTGGTGGACTCGGCGCTCTTGCGTCCGGGTCGTTTGGACCGG
CAACTCTACCTGGGGTTTCCTGACGCGGGGGAAAGCTTGGGTATTTTGAA
GGCTTTGGTGCGGAAGATGAGCTTGACGCCCCAGGCTACGGCCGCATTGG
AAAAGGTGGCCTTGGCGGACGGGGCGGACCTGATGACGGGGGCGGACTGG
CAGGCCATGGTCAGCACGGCGCAATTGGAGGCGGTGCATGAGAAATTAGC
GGCTATGGGGACGACTAAGACGGGCAATGGAGCGGGTGGAGAGAAGGAGA
GCAGTCAGGGCGGGGATGGAGGGGAAGGGGTGGTGGTGACCGCACAACAT
CTGTGGGCAGCTTTTGCAGCCACCCGCCCGTCGATACCACCGGGGGAAAG
GGCAAAGCTTCAGGCCATTTACGACAAGTTTCGGAAGTCTCGTGATGGGG
ATTACAAAGTTGCGAGCGCCACAGACGACGGGAAACACTTGCGGACAGCC
TTAAAATGAGAGCCTTTCCATGTTAAATACCCAACCATGTAATTAGGGAC
GAGACGCCGTCAAAGGAAAAAATGCGCGTCGTCCCACC back to topprotein sequence of rna8945 >rna8945-protein ID=rna8945-protein|Name=rna8945|organism=Nannochloropsis gaditana|type=polypeptide|length=288bp
MRLRVKPGLRHCFVALPSSFTHRLREDAAVSSGTVVLELQWTGLDGENCR
AFVCWNGAVSGGKIRGSDAGNAEVLEMDEAFARCLGLGPMLAVYRNVQLR
VQRALVVEFPRRVELEPCTPDDWELVELHAGYLEAEILRQIAVVYAGQTL
PIWIHAQKLVQLRVVNVSSRAPQRLSTSTEVVVAPCLRPPPVAHAHPFPE
DDAPPVFLASPPLRVQPQPARRQHWPFQAQTVIALHPSTYRAALRNPAPA
TDQALARISQRVRGRGNREGQREGCGSLVTGFEEVGPR back to topmRNA from alignment at KK037250.1:539198..540142- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8945 ID=rna8945|Name=rna8945|organism=Nannochloropsis gaditana|type=mRNA|length=945bp|location=Sequence derived from alignment at KK037250.1:539198..540142- (Nannochloropsis gaditana)
CAGGGATTTGGGGCTACAACGGACTGAGACATTGCATTGTCTCAGCAGGG
TTCCTCCTACAACGGACCGACAGACAAAATCATGCGCCTGCGAGTGAAAC
CGGGTCTTAGGCATTGCTTTGTCGCCCTCCCTTCAAGTTTCACTCATCGC
CTCCGCGAAGACGCCGCTGTATCTTCCGGTACGGTGGTACTGGAACTGCA
GTGGACGGGACTTGACGGCGAGAATTGTCGGGCTTTCGTCTGTTGGAACG
GGGCCGTCTCAGGTGGCAAGATACGAGGGAGCGATGCGGGCAATGCTGAG
GTCTTGGAGATGGATGAGGCATTCGCGCGATGCTTGGGCTTGGGGCCAAT
GCTGGCAGTCTACAGAAATGTGCAGCTACGTGTCCAACGGGCATTGGTGG
TGGAGTTCCCACGCCGGGTGGAATTGGAGCCTTGCACGCCAGACGACTGG
GAGCTGGTGGAACTGCACGCAGGCTATTTGGAAGCGGAGATCTTAAGACA
AATTGCCGTGGTGTACGCGGGTCAAACCCTGCCGATCTGGATCCACGCGC
AGAAGCTCGTGCAATTGCGTGTCGTCAATGTGTCGTCTAGGGCTCCGCAA
CGCCTGAGCACTTCCACGGAAGTTGTGGTCGCTCCCTGTCTCCGGCCCCC
GCCAGTGGCCCATGCCCACCCCTTCCCGGAAGATGACGCCCCCCCCGTCT
TTCTTGCGAGCCCGCCTTTGCGCGTGCAGCCCCAGCCTGCACGTCGCCAG
CACTGGCCCTTCCAGGCCCAGACGGTGATCGCACTCCACCCCTCCACCTA
CCGAGCGGCCTTGCGGAACCCAGCACCCGCTACCGACCAGGCCTTGGCAC
GGATAAGCCAGCGAGTCAGAGGAAGGGGGAATAGGGAGGGTCAGAGGGAG
GGGTGTGGGAGCCTGGTGACGGGCTTCGAGGAAGTGGGGCCTCGG back to topCoding sequence (CDS) from alignment at KK037250.1:539198..540142- >rna8945 ID=rna8945|Name=rna8945|organism=Nannochloropsis gaditana|type=CDS|length=864bp|location=Sequence derived from alignment at KK037250.1:539198..540142- (Nannochloropsis gaditana)
ATGCGCCTGCGAGTGAAACCGGGTCTTAGGCATTGCTTTGTCGCCCTCCC
TTCAAGTTTCACTCATCGCCTCCGCGAAGACGCCGCTGTATCTTCCGGTA
CGGTGGTACTGGAACTGCAGTGGACGGGACTTGACGGCGAGAATTGTCGG
GCTTTCGTCTGTTGGAACGGGGCCGTCTCAGGTGGCAAGATACGAGGGAG
CGATGCGGGCAATGCTGAGGTCTTGGAGATGGATGAGGCATTCGCGCGAT
GCTTGGGCTTGGGGCCAATGCTGGCAGTCTACAGAAATGTGCAGCTACGT
GTCCAACGGGCATTGGTGGTGGAGTTCCCACGCCGGGTGGAATTGGAGCC
TTGCACGCCAGACGACTGGGAGCTGGTGGAACTGCACGCAGGCTATTTGG
AAGCGGAGATCTTAAGACAAATTGCCGTGGTGTACGCGGGTCAAACCCTG
CCGATCTGGATCCACGCGCAGAAGCTCGTGCAATTGCGTGTCGTCAATGT
GTCGTCTAGGGCTCCGCAACGCCTGAGCACTTCCACGGAAGTTGTGGTCG
CTCCCTGTCTCCGGCCCCCGCCAGTGGCCCATGCCCACCCCTTCCCGGAA
GATGACGCCCCCCCCGTCTTTCTTGCGAGCCCGCCTTTGCGCGTGCAGCC
CCAGCCTGCACGTCGCCAGCACTGGCCCTTCCAGGCCCAGACGGTGATCG
CACTCCACCCCTCCACCTACCGAGCGGCCTTGCGGAACCCAGCACCCGCT
ACCGACCAGGCCTTGGCACGGATAAGCCAGCGAGTCAGAGGAAGGGGGAA
TAGGGAGGGTCAGAGGGAGGGGTGTGGGAGCCTGGTGACGGGCTTCGAGG
AAGTGGGGCCTCGG back to top
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