|
|
Properties
| Property Name | Value |
|---|
| Product | Phosducin, thioredoxin-like domain protein |
| Orig transcript id | gnl|cribi|Naga_100188g12.2465.mrna |
| Orig protein id | gnl|cribi|Naga_100188g12.2465 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:513433..514993 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8931 ID=rna8931|Name=rna8931|organism=Nannochloropsis gaditana|type=mRNA|length=3136bp
ACAAGAAGGGTGTCGCTCTTTCTCTTCCACTCTGAAAACTGCGAAACATT
TGGCCACGCGCGGGCACACGTCCACTATCTGGACTTACGTTGCACGTCTT
CCTTTTTGTGCATATGACGCGCTTTATCTTGTATTTATCTCGTGTCATGG
AAGTTGGTTTCGGAGCGAGGCGGTCTTTTAAGGCGGCGCCCTCTCCGCGT
GTAGAGCGTGTCACTCACGTGCTGATGCCTGCAAATACTTCGCCACGCCG
ACAGGAACACACTGAGCGACATCAGGCAATCGCAGAGCATTGTCTTACCG
TTCTGAGCGGTGAGCCTCACGTAAAAGAACTCGTACTTCCACGTCTTCAT
AAAAGCGGCGTAGACATTAAATTGGCGTCGTGAGTGAAATTTGCCTGGAA
AGAACCCGCGTTTTCTGCTTCGGGTTATCTTTATAATAGAATCAACGACT
CTGCCACTTGCCAACATCACTGCATCATGGCACCATTGACACGGACACAT
GTGTTTGTTGGCGTCATTGCCTGCTGTGTTTTAGTTGGACTTGTGGAGGC
TTTTCTGCCGGCGGGCGTGAAACAGGCGTTGCACCGTCGCGCCGGACGAG
TCACACTTAGCACCCGGCCTTCAAAACCTACCCTGGCCGCAGCAAAATTG
GTCGACCCGCCACCACCCTTGCAAGCTCGTCCAGACTGGTTGCCAAAGAT
CCCTGAAGGTTGCGACTCGGACTATGAGTGCGAAGGAACCGAAAGCTGCT
GTGACTTCATCTTCTTCAAGATGTGTTGCTCCGATGGAGGGCACACGCAG
GAGGCGTGGACCCCGGTACCCATACCGGTGAGGCCTGGCGATGGTTATCA
ACAGGGGGGAGGGTTTGGCGGCAACGGAGGCTACTCAGGCGGCGGAGGCC
TCTACCGATGAAGAGAGCAGAGGGACGAGGAGGGGAGGGGGGCCCGTCCT
TAAAGCTAACGAGCGCGTCGGTCGATAGTTTGAGTGGATTCTATTGTGTC
AGGTTGACACGTACTAGCATTGTTGTGATTTTTGTAGGAATTTTTGTACA
TAGCCCGACCCCACCACTGGAGTCAAAAGTTCCTGAGGGTGCCAGTAGCG
GCAGTGGTATGCCACACATTTCTCACGGTTTTGTCATCAAGTACTTTGCC
AGCTGTCGTGCCCTTGTTTTGGCAATGGTCCTCGTTCAACTCGTCAGTGT
GCGAGGAATGGAACGACGCAGACGCGGACTGTGGTAAAGCAGCGTGAGAC
ATCAAGATCGGAAAGAACTGTCTTCTAGTGTCATAGGTCTTGCGGACTGT
CTTCTTGTGTCGTACGTCTTGCGGGACCTCCCTCAGCAATGAGGAGCAGA
TCGTTATGATTGAAACGTTTGAAGCAGGTGATCGATTCAAGTGGCACAGG
CAGGTCAAATGAGGTGTGCGCGTGGTGTAGCGCCTTAGCCTGTCTCTTGT
AGTCATCCCTTTTTGTAAATAGTCGAGTCGGAGAAAGGTGGCCTTACGCC
CCGTGCTCGAGATACTCTCATGTTCATACGCGACGGAGATTTGATTTCAA
GTATTTTACAGATTCTGTTGGGTAGCAATTAATAGCGAAAAGGCAAGTCA
GCTCACGGTCCTGGGTGAGGGTCTGAAGAATGACTGGACTTGGACAAGAG
TCGAGAGTGCTGAAAGGACGGATGCCAAAGTGAGGCCAGACGTGGACAGA
TTTGGCGCCCTTTCCGGCGCCCTTCTGCATTATGAAGCCTTCCATCCGTT
CTTGGCCCCAAAAAACATCCACCATGGCCGTGGTTGTCGCCGAAAAGCTG
AAATAATTACAGTAGCCAATGCTTTCGGCATGGCTTGGACTGCATGATAT
GTGGTTTGGTTCTTCTGTACAAAAGTCCTTCACATTAGAGAGAAAGGTCG
CGGGGAGATGGATAAAATGAAAACAAGCACTTGTTTCGATGGACTGACTT
TCTACACCAGTAAATTTTTCGGTTTTTGCGTACAGAGAATGTTTATCTCG
CATGGCTCAAGTTTGACTGTGAGCACTTTGAACGCGTAACGACTGATATT
CACCCCAAGACACCTTTCTCCTCCAGCAGGCCCTCCACGTCTTCGCACAA
GAAGGCTGCACCCAAACACGCATCCACTTGGGCCACACATTCCTGTACTT
CCCCCTTCTCATATACCAGTAGCATGGGAAGTGCTGCGGTGTCTAAACGT
AAATTGCTACGGGGAAGATTGAGTCCTTGATGGAGGCGCAGAAAACAAAC
GGCAGGATAATTTCGAGCCAGATAAGGATACGGGGTCTTACGGCCGCTTG
CTGCACTGATAGCTGCTTCATATCTGCCAGCCAGCGCACGCGTTGCAACT
CAACGAAGTCATCATCTCCAGCATTGATTGATGGGCTGTCTTCATCCTTT
GAATCCAAGATGTTCGGCCAGCTCGAGGACTCTATCCTTGTTTTTGATTT
GCTGGTACCGCCGTCTGCGATACGAAAAAGCACATATTGTCGATGCTCGT
TTTCCTCTCTTTTCAAGTCCTGCATAGCCTTAGCATGGGCTTTATAATCT
GCCAAAACACCTTTGGGACCAGTTTTAGAGCCAAATCTATCACCGTGTCG
GTTCGGAGGACATCGCATTTCCATGATGCAATCTTCTGCATTAAAAGACC
ATGGCTGCTCGTCCTCGCCCTTCTCAAAACCATCTGAAACAGCGTGGTGA
CCATCTTCGGTCCAACTTGTGTAGCGACCCGGTACATTGGACTGGAAAAA
TGTGTTTTCTAATGTAGCACCTTTACCGTTCATGCTTGAGTTGTCGTCCT
AAGGGGATATGGGTCAAAAGGTTTTCTTTTTTTAGGATTCTGCAACCCCC
CAAATAGCGCGTAGAAAGTATAAATGGGCCCACCACAAGGATTACATATG
TCTGTCCAAGCTTGTAAAAGATAATTCCGTTTGATAATCGCTGTATGGTG
GAAACCGCTTGTTGACAAACATTCGCTTGAGCCGCTTTCAGGACATTTTG
TATGAAAAAGACGGAACACATCACAAAACTTCAACTTTTCGACACAAAAA
CCTCCTCTATGTGAAAAACATGACATTGAAAAATGTTAGGACGAGTCCAT
CAATCAAGTTAAAATAAACACACATCGTTACAAACA back to topprotein sequence of rna8931 >rna8931-protein ID=rna8931-protein|Name=rna8931|organism=Nannochloropsis gaditana|type=polypeptide|length=386bp
MSVILGSKKGDHDAHRYDHRSEQPAHKHRHIANLDILGIIRLEEAHAGCK
KGGGLRRRDWRAASLRDRGGKHRPKQRRGSGNDMAIFLFDDNSSMNGKGA
TLENTFFQSNVPGRYTSWTEDGHHAVSDGFEKGEDEQPWSFNAEDCIMEM
RCPPNRHGDRFGSKTGPKGVLADYKAHAKAMQDLKREENEHRQYVLFRIA
DGGTSKSKTRIESSSWPNILDSKDEDSPSINAGDDDFVELQRVRWLADMK
QLSVQQAAVRPRILFGEVEETSGTDMVDKIDALLESSPTTKVVVHVYEPH
LPACRLLNSILPYLARNYPAVCFLRLHQGLNLPRSNLRLDTAALPMLLVY
EKGEVQECVAQVDACLGAAFLCEDVEGLLEEKGVLG back to topmRNA from alignment at KK037250.1:513433..514993- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8931 ID=rna8931|Name=rna8931|organism=Nannochloropsis gaditana|type=mRNA|length=1561bp|location=Sequence derived from alignment at KK037250.1:513433..514993- (Nannochloropsis gaditana)
ATGAGTGTGATCCTGGGATCGAAAAAGGGCGATCATGATGCGCACGTGCG
ATGGCGATTCGTTTAGGACGACTGTCTCCAGCCTCACCACGACTTTTACG
AATCGGTAAAAGCGATACGACCATAGAAGTGAGCAACCTGCCCATAAACA
TAGACATATCGCAAATCTTGACATACTGGGGATAATAAGGCTGGAAGAAG
CACACGCAGGATGTAAGAAAGGGGGTGGCTTGCGACGACGAGACTGGAGG
GCAGCGAGCCTAAGGGATAGAGGGGGTAAACACCGACCAAAGCAAAGAAG
AGGAAGTGGAAATGATATGGCTATTTTTCTGTTTGTAACGATGTGTGTTT
ATTTTAACTTGATTGATGGACTCGTCCTAACATTTTTCAATGTCATGTTT
TTCACATAGAGGAGGTTTTTGTGTCGAAAAGTTGAAGTTTTGTGATGTGT
TCCGTCTTTTTCATACAAAATGTCCTGAAAGCGGCTCAAGCGAATGTTTG
TCAACAAGCGGTTTCCACCATACAGCGATTATCAAACGGAATTATCTTTT
ACAAGCTTGGACAGACATATGTAATCCTTGTGGTGGGCCCATTTATACTT
TCTACGCGCTATTTGGGGGGTTGCAGAATCCTAAAAAAAGAAAACCTTTT
GACCCATATCCCCTTAGGACGACAACTCAAGCATGAACGGTAAAGGTGCT
ACATTAGAAAACACATTTTTCCAGTCCAATGTACCGGGTCGCTACACAAG
TTGGACCGAAGATGGTCACCACGCTGTTTCAGATGGTTTTGAGAAGGGCG
AGGACGAGCAGCCATGGTCTTTTAATGCAGAAGATTGCATCATGGAAATG
CGATGTCCTCCGAACCGACACGGTGATAGATTTGGCTCTAAAACTGGTCC
CAAAGGTGTTTTGGCAGATTATAAAGCCCATGCTAAGGCTATGCAGGACT
TGAAAAGAGAGGAAAACGAGCATCGACAATATGTGCTTTTTCGTATCGCA
GACGGCGGTACCAGCAAATCAAAAACAAGGATAGAGTCCTCGAGCTGGCC
GAACATCTTGGATTCAAAGGATGAAGACAGCCCATCAATCAATGCTGGAG
ATGATGACTTCGTTGAGTTGCAACGCGTGCGCTGGCTGGCAGATATGAAG
CAGCTATCAGTGCAGCAAGCGGCCGTAAGACCCCGTATCCTGTTTGGAGA
GGTCGAAGAAACTTCAGGGACAGATATGGTCGATAAGATTGATGCCCTTT
TGGAATCCTCTCCTACAACAAAGGTTGTCGTGCACGTCTACGAGCCTCAT
CTTCCCGCTTGCCGACTCCTAAATTCCATTCTACCTTATCTGGCTCGAAA
TTATCCTGCCGTTTGTTTTCTGCGCCTCCATCAAGGACTCAATCTTCCCC
GTAGCAATTTACGTTTAGACACCGCAGCACTTCCCATGCTACTGGTATAT
GAGAAGGGGGAAGTACAGGAATGTGTGGCCCAAGTGGATGCGTGTTTGGG
TGCAGCCTTCTTGTGCGAAGACGTGGAGGGCCTGCTGGAGGAGAAAGGTG
TCTTGGGGTGA back to topCoding sequence (CDS) from alignment at KK037250.1:513433..514993- >rna8931 ID=rna8931|Name=rna8931|organism=Nannochloropsis gaditana|type=CDS|length=3483bp|location=Sequence derived from alignment at KK037250.1:513433..514993- (Nannochloropsis gaditana)
GACGACAACTCAAGCATGAACGGTAAAGGTGCTACATTAGAAAACACATT
TTTCCAGTCCAATGTACCGGGTCGCTACACAAGTTGGACCGAAGATGGTC
ACCACGCTGTTTCAGATGGTTTTGAGAAGGGCGAGGACGAGCAGCCATGG
TCTTTTAATGCAGAAGATTGCATCATGGAAATGCGATGTCCTCCGAACCG
ACACGGTGATAGATTTGGCTCTAAAACTGGTCCCAAAGGTGTTTTGGCAG
ATTATAAAGCCCATGCTAAGGCTATGCAGGACTTGAAAAGAGAGGAAAAC
GAGCATCGACAATATGTGCTTTTTCGTATCGCAGACGGCGGTACCAGCAA
ATCAAAAACAAGGATAGAGTCCTCGAGCTGGCCGAACATCTTGGATTCAA
AGGATGAAGACAGCCCATCAATCAATGCTGGAGATGATGACTTCGTTGAG
TTGCAACGCGTGCGCTGGCTGGCAGATATGAAGCAGCTATCAGTGCAGCA
AGCGGCCGTAAGACCCCGTATCCTGTTTGGAGAGGTCGAAGAAACTTCAG
GGACAGATATGGTCGATAAGATTGATGCCCTTTTGGAATCCTCTCCTACA
ACAAAGGTTGTCGTGCACGTCTACGAGCCTCATCTTCCCGCTTGCCGACT
CCTAAATTCCATTCTACCTTATCTGGCTCGAAATTATCCTGCCGTTTGTT
TTCTGCGCCTCCATCAAGGACTCAATCTTCCCCGTAGCAATTTACGTTTA
GACACCGCAGCACTTCCCATGCTACTGGTATATGAGAAGGGGGAAGTACA
GGAATGTGTGGCCCAAGTGGATGCGTGTTTGGGTGCAGCCTTCTTGTGCG
AAGACGTGGAGGGCCTGCTGGAGGAGAAAGGTGTCTTGGGGTGACGATAC
GACCATAGAAGTGAGCAACCTGCCCATAAACATAGACATATCGCAAATCT
TGACATACTGGGGATAATAAGGCTGGAAGAAGCACACGCAGGATGTAAGA
AAGGGGGTGGCTTGCGACGACGAGACTGGAGGGCAGCGAGCCTAAGGGAT
AGAGGGGGTAAACACCGACCAAAGCAAAGAAGAGGAAGTGGAAATGATAT
GGCTATTTTTCTGTTTATGAGTGTGATCCTGGGATCGAAAAAGGGCGATC
ATGATGCGCACGACGACAACTCAAGCATGAACGGTAAAGGTGCTACATTA
GAAAACACATTTTTCCAGTCCAATGTACCGGGTCGCTACACAAGTTGGAC
CGAAGATGGTCACCACGCTGTTTCAGATGGTTTTGAGAAGGGCGAGGACG
AGCAGCCATGGTCTTTTAATGCAGAAGATTGCATCATGGAAATGCGATGT
CCTCCGAACCGACACGGTGATAGATTTGGCTCTAAAACTGGTCCCAAAGG
TGTTTTGGCAGATTATAAAGCCCATGCTAAGGCTATGCAGGACTTGAAAA
GAGAGGAAAACGAGCATCGACAATATGTGCTTTTTCGTATCGCAGACGGC
GGTACCAGCAAATCAAAAACAAGGATAGAGTCCTCGAGCTGGCCGAACAT
CTTGGATTCAAAGGATGAAGACAGCCCATCAATCAATGCTGGAGATGATG
ACTTCGTTGAGTTGCAACGCGTGCGCTGGCTGGCAGATATGAAGCAGCTA
TCAGTGCAGCAAGCGGCCGTAAGACCCCGTATCCTGTTTGGAGAGGTCGA
AGAAACTTCAGGGACAGATATGGTCGATAAGATTGATGCCCTTTTGGAAT
CCTCTCCTACAACAAAGGTTGTCGTGCACGTCTACGAGCCTCATCTTCCC
GCTTGCCGACTCCTAAATTCCATTCTACCTTATCTGGCTCGAAATTATCC
TGCCGTTTGTTTTCTGCGCCTCCATCAAGGACTCAATCTTCCCCGTAGCA
ATTTACGTTTAGACACCGCAGCACTTCCCATGCTACTGGTATATGAGAAG
GGGGAAGTACAGGAATGTGTGGCCCAAGTGGATGCGTGTTTGGGTGCAGC
CTTCTTGTGCGAAGACGTGGAGGGCCTGCTGGAGGAGAAAGGTGTCTTGG
GGTGACGATACGACCATAGAAGTGAGCAACCTGCCCATAAACATAGACAT
ATCGCAAATCTTGACATACTGGGGATAATAAGGCTGGAAGAAGCACACGC
AGGATGTAAGAAAGGGGGTGGCTTGCGACGACGAGACTGGAGGGCAGCGA
GCCTAAGGGATAGAGGGGGTAAACACCGACCAAAGCAAAGAAGAGGAAGT
GGAAATGATATGGCTATTTTTCTGTTTATGAGTGTGATCCTGGGATCGAA
AAAGGGCGATCATGATGCGCACGACGACAACTCAAGCATGAACGGTAAAG
GTGCTACATTAGAAAACACATTTTTCCAGTCCAATGTACCGGGTCGCTAC
ACAAGTTGGACCGAAGATGGTCACCACGCTGTTTCAGATGGTTTTGAGAA
GGGCGAGGACGAGCAGCCATGGTCTTTTAATGCAGAAGATTGCATCATGG
AAATGCGATGTCCTCCGAACCGACACGGTGATAGATTTGGCTCTAAAACT
GGTCCCAAAGGTGTTTTGGCAGATTATAAAGCCCATGCTAAGGCTATGCA
GGACTTGAAAAGAGAGGAAAACGAGCATCGACAATATGTGCTTTTTCGTA
TCGCAGACGGCGGTACCAGCAAATCAAAAACAAGGATAGAGTCCTCGAGC
TGGCCGAACATCTTGGATTCAAAGGATGAAGACAGCCCATCAATCAATGC
TGGAGATGATGACTTCGTTGAGTTGCAACGCGTGCGCTGGCTGGCAGATA
TGAAGCAGCTATCAGTGCAGCAAGCGGCCGTAAGACCCCGTATCCTGTTT
GGAGAGGTCGAAGAAACTTCAGGGACAGATATGGTCGATAAGATTGATGC
CCTTTTGGAATCCTCTCCTACAACAAAGGTTGTCGTGCACGTCTACGAGC
CTCATCTTCCCGCTTGCCGACTCCTAAATTCCATTCTACCTTATCTGGCT
CGAAATTATCCTGCCGTTTGTTTTCTGCGCCTCCATCAAGGACTCAATCT
TCCCCGTAGCAATTTACGTTTAGACACCGCAGCACTTCCCATGCTACTGG
TATATGAGAAGGGGGAAGTACAGGAATGTGTGGCCCAAGTGGATGCGTGT
TTGGGTGCAGCCTTCTTGTGCGAAGACGTGGAGGGCCTGCTGGAGGAGAA
AGGTGTCTTGGGGTGACGATACGACCATAGAAGTGAGCAACCTGCCCATA
AACATAGACATATCGCAAATCTTGACATACTGGGGATAATAAGGCTGGAA
GAAGCACACGCAGGATGTAAGAAAGGGGGTGGCTTGCGACGACGAGACTG
GAGGGCAGCGAGCCTAAGGGATAGAGGGGGTAAACACCGACCAAAGCAAA
GAAGAGGAAGTGGAAATGATATGGCTATTTTTCTGTTTATGAGTGTGATC
CTGGGATCGAAAAAGGGCGATCATGATGCGCAC back to top
|