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Properties
| Property Name | Value |
|---|
| Product | Ion transport |
| Orig transcript id | gnl|cribi|Naga_100188g7.2459.mrna |
| Orig protein id | gnl|cribi|Naga_100188g7.2459 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:498979..502088 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8926 ID=rna8926|Name=rna8926|organism=Nannochloropsis gaditana|type=mRNA|length=1319bp
AGTGGTGTTTCCGGCCGTTTGCCCAGTATTTCTCTTCGCGACCTCGCATG
CTCGCTGGCCCCTGCCGATCGATCCATTAAATCCTCATAGCGCCCTGACG
CCTACATACCAGTGGTCCCAAGCCCCCACACGACGTTTCGACACGGTTCC
CATTGCTCATTGCCTGTCCTCAACGTTCCTAGGTTGTCATTGCCAGGTAT
CCACACATATTGGTGCGTGCGACCGCTGTCGACGGCAGATGCAGTATGCG
GCTTGGAACAAGTCAACATTCGTAGATATACTTGTTTTAATTCTCAAAGT
CATAGTGGCCGCCGCATTGATTGGCCATGCTCATCACATTAAAGGGGAAA
TCCAACCTGAACCTGTGTACGGGGTCCTTGACGACCCTACCTACGCCTAC
AGTGCAGAAGCCGCAACTGACATGCTGGTCCGTGTCAGCTGGATTGCTGG
GGGTTATGTAATGGTAGCAAGCGCCATCGGGTTGATAGGGCGGTGCCTGC
ACGCTGCCCCTCTATATGGTGTCTACTACTGCGCCAATATTTTTGGCTTT
GCTGTATGCCTGACCGCAGCAATAATCCCAACAGTGTGGGGTACGACAAG
AAAAGGACTATGTCTGGCCGCTGAAGCCTCCTGCCTGGCTGTTGAGGATT
TGAGTCTGTGTCCTTATCCCGTCAGTTCTTTTGCCACTCAAACACGTCAG
CGGGTACTGGCCGATCCGACGGAAGGGGTCTCCGGGGCTGAAGGGGCTGT
GACAATGGCAAGTTCCAGTCCGTGTTGCTACTTGCCTTCGTTTTTATTCT
TCTGTGAACATTTTTTTGGGGCCGTGTACACGCAAACTGTAATCGCTGTT
GTCCTCCTCGCCCTAGTCATGACGCAGAGCATGATCTCTTGCTGCTATCT
GTGCTGTGACTGTGACCGGCCGTGGACATCCAAGGGCCGTCTGCCAGACA
TCCCAGAGCTTCCCACGTTCGTTCCTCCGGGCGGTCTGCCCGGTCGATTT
TCTTTGCACAAGGTAGGCGAACCCTTAAAGCCGGGGAGGGACAGTCAGGC
TGTCAAAGGAAGAAGGAGGACAAGGGAGGATGGGAGAAGACTTTCTTCGC
TTGACAAAGCAGGTCCCGCGGTTCAAGAGGGGGGGGAGGGGGAAGACAGC
GCGGAGGGTGGTGCTGGGGAAAAAGGGTCCCGGTGCGCAGAGGAGAGGAA
GGAGGACAGTAAAGGGTGAGAAATGTGGAGGACGAACGACAAAGCCACAG
TGTACAAAGGCGCGTGTTTAAATAACATGTTGAATGACTGCGAACCCGAT
CAAAGAAGTGTGTTCTTCG back to topprotein sequence of rna8926 >rna8926-protein ID=rna8926-protein|Name=rna8926|organism=Nannochloropsis gaditana|type=polypeptide|length=897bp
MATAPLTRGEGQHEPDGYPYQLHNFEDTVQKAVFCIKDGLDRLIRFHPVV
GSPWANWAHRQRLRTVGYILPWLAIWTLILLTFIETPMWCLRDPSTCDPR
SSQSELYPRVTSRFVGRAPALTTEFIALSVLAVDYILQIIAEGLLVVTCR
PWARGFWHQMLLGASFLSLVISALFPSPWTFRVAPFLRILFLATYSRRLR
QEMQLIVRILPQFGKALVLLLSFFLVYAILGLSLFSSTSKNKADAQEAAL
YFPNFRGAITSVWNLFLYWTFPNMMVLRDPETGKYLPPNVVLTLWVFSFM
IIVIYFVLNLALAIVVDVYNEQNREREKRRKMDRQVSMAQAFSLLAVPSG
LPPHGSSGQVEAWAAVEDSLMMPATNDPFFRPLASVARSSFVGASASMST
PTAVSSPALPSSTAPVQAVPGHVMRQALLLLSTFSSVPRLTAHTLDLLLG
NLTKGDDGWVRKASFMRLPDLLAAVSRKQNHRQPGMHRHHYHRRQQKHHG
ERTIAQGAYVHAGAGGEEGGEDEEEDGGGEEDEGEGRMRFVDLWCPRLAS
SRIFAYVSVFVQSAFLEYFIDAVIIANLALAIAANGNGAPPSSPGPTPAP
DLTSTTVRTLFTMGAEFHGAVEEGAASKETLLSHRDFSFMAAGIFTLEAV
AKLFVYGWKQYVASYMNLFDATLTLLTVGGAIYEVVGSCGGTGHQGSQFH
QPFLVFELLRILRLFRALMAIPQFRSTGHAFLKILPSASSLFLNLFAVTF
LFAACGLEIYGGLVNTDPARPQLSVLTPTYYYENGLFLFNFNDLGGGFII
LVEILIDSSLIQPFYEAFGALVEGNGAGARVGTLIFFVLYYCIGQLVVLN
IVVAFILDAFMYESEKEEEGLEENRASRRAMRRQPEGGELSREKGSL back to topmRNA from alignment at KK037250.1:498979..502088+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8926 ID=rna8926|Name=rna8926|organism=Nannochloropsis gaditana|type=mRNA|length=3110bp|location=Sequence derived from alignment at KK037250.1:498979..502088+ (Nannochloropsis gaditana)
ACTGGCAGGCTCATCTATTTTCCAGGGCCCTTTGCACTTCATTACATGGA
GCAGTAGTGCCAATTTGCGGTGGGACTGGCGTCAGGTCTCCTCGCCCCAA
AACTCCTGACAACGATTCACGCCTCGAACTCCACTATGGCAACAGCACCG
TTGActcggggagaaggacagcaCGAGCCAGACGGCTATCCGTATCAGTT
GCATAACTTTGAAGATACTGTACAGAAGGCCGTATTTTGTATCAAAGATG
GACTGGATCGATTAATTCGATTTCATCCCGTAGTTGGAAGTCCATGGGCC
AACTGGGCTCATAGGCAACGTCTTCGTACGGTAGGATATATCCTGCCGTG
GCTGGCGATATGGACTCTTATATTATTAACCTTTATCGAGACACCAATGT
GGTGCTTGCGGGATCCAAGCACGTGCGATCCCAGAAGCTCGCAAAGCGAA
CTCTACCCGCGAGTCACGTCTCGTTTCGTAGGACGAGCCCCTGCTTTGAC
GACCGAATTCATCGCCCTGAGCGTATTAGCCGTGGACTACATTTTGCAAA
TAATAGCTGAGGGACTCTTAGTTGTCACATGTCGTCCTTGGGCACGTGGG
TTCTGGCATCAGATGTTGTTGGGTGCCTCTTTTTTGAGCCTTGTAATTTC
TGCcttgtttccctccccatggaCCTTCCGAGTAGCACCGTTTTTGCGAA
TACTATTCCTCGCCACCTactcccgccgcctccgacAAGAGATGCAACTG
ATTGTACGAATACTGCCTCAGTTCGGGAAGGCACTTGTGTTGCTCTTATC
CTTCTTCTTAGTCTACGCCATTCTCGGGCTATCTCTTTTTTCATCCACGT
CCAAAAACAAGGCCGACGCGCAAGAAGCAGCCCTATACTTCCCCAACTTT
CGCGGTGCTATCACTAGTGTTTGGAATCTCTTTTTGTACTGGACGTTTCC
GAACATGATGGTCCTTCGGGATCCCGAAACAGGGAAATACTTGCCACCTA
ACGTCGTTCTGACCCTGTGGGTCTTTTCCTTCATGATCATCGTCATATAC
TTCGTTCTCAATTTGGCGCTGGCGATCGTCGTCGACGTGTATAATGAGCA
GaatagagagagagaaaagcgaAGAAAAATGGACAGGCAGGTGAGCATGG
CCCaggccttctccctcctggcgGTGCCTTCGGGGTTGCCGCCGCATGGA
AGTTCCGGTCAAGTGGAGGCGTGGGCCGCAGTGGAAGATAGCTTGATGAT
GCCGGCAACAAACGATCCCTTCTTCCGGCCCTTGGCCTCGGTTGCACGCT
CATCTTTCGTTGGGGCATCGGCCTCCATGTCAACGCCTACAGCCGTCTCC
TCTCctgctttgccttcctccacggcccccgtCCAAGCCGTCCCAGGCCA
CGTCATGCGCcaagccctccttctgctctccaccttctcctccgttcCTC
GACTGACCGCGCAtaccctcgacctcctcctcggcaacCTCACAAAGGGC
GATGACGGCTGGGTACGCAAAGCATCATTCATGCGACTGCCCGACCTTTT
GGCTGCCGTGTCCCGCAAGCAGAACCACCGACAGCCTGGAATGCATCGCC
ACCACTACCATCGACGGCAGCAGAAGCACCATGGGGAGAGAACAATAGCA
CAAGGCGCTTATGTACATGCgggagccggaggggaagagggaggggagga
cgaggaggaggatggaggcggggaggaagacgagggggaaggcaggatgC
GTTTCGTCGACCTGTGGTGCCCGCGGCTGGCATCTTCGCGGATATTTGCG
TACGTCAGTGTCTTCGTGCAAAGCGCCTTCCTGGAGTACTTTATCGACGC
CGTCATCATCGCCAACCTGGCCCTGGCGATTGCGGCCAACGGGAATGGCG
CCCCTCCGTCCAGCCCGGGACCCACGCCTGCTCCCGATCTCACTTCGACG
ACGGTGAGGACGTTGTTCACTATGGGGGCAGAATTTCACGGAGcagtaga
ggagggagctgCGTCCAAAGAAACGCTTTTGTCCCACAGGGATTTCAGTT
TTATGGCCGCGGGCATATTTACCCTCGAAGCCGTGGCGAAGCTCTTTGTG
TACGGTTGGAAGCAATATGTGGCTTCTTACATGAACCTGTTCGATGCCAC
TTTGACCCTTTTGACCGTTGGGGGCGCGATAtacgaggtggtggggagcT
GCGGGGGCACCGGCCATCAAGGCTCTCAATTCCACCAACCCTTTCTCGTG
TTTGAGCTGCTCCGAATCCTCCGGCTCTTTCGCGCCCTAATGGCCATCCC
ACAGTTTCGGTCCACAGGTCATGCCTTCTTGaaaatccttccctccgcct
cttccctcttccttaaCCTTTTCGCGGTGACCTTCCTGTTTGCGGCTTGC
GGCCTGGAAATCTACGGAGGCCTGGTGAACACCgaccccgcccgccccca
acTATCGGTGCTAACTCCAACTTACTACTATGAAAATGGTCTCTTTCTAT
TTAATTTCAACGATCTAGGCGGGGGTTTCATTATTCTGGTTGAGATCCTT
ATCGATTCCTCTTTAATCCAGCCATTCTATGAGGCTTTTGGAGCCTTGGT
AGAGGGAAATGGGGCAGGAGCGCGCGTGGGTACGCTCATATTCTTTGTAC
TGTACTACTGCATTGGACAGCTCGTGGTGCTCAACATTGTCGTCGCCTTT
ATCTTGGATGCATTTATGTATGAATctgagaaagaagaggagggattgga
AGAAAACAGAGCTTCAAGACGGGCGATGAGGCGCCAACCAGAAGGTGGGG
AATTAAGTCGTGAGAAGGGGTCGCTCTAGCATTCGTCAGAAGAAAACGta
gacgggaaggaagacatgAGATTCTGGCGCGCCTTAGCTTTAGAGCAGGA
AAACTCCTTCAAGTAATTCTTATGTCTATATAAAAGTGGCGACAGTTCTA
GCGTCACGCCAAAATCACGCGTCATCATAGGCTGAATAGCTCGCATTGCC
TTGAGTATGAGGGATCATATTGGGAAAATTTGAAAAGAGTAAATGATGCA
GCTTTGAATGGTCATGTACAGCGCATAAATGAATAAATGAAAAGAAATGG
CAGACATACT back to topCoding sequence (CDS) from alignment at KK037250.1:498979..502088+ >rna8926 ID=rna8926|Name=rna8926|organism=Nannochloropsis gaditana|type=CDS|length=2694bp|location=Sequence derived from alignment at KK037250.1:498979..502088+ (Nannochloropsis gaditana)
ATGGCAACAGCACCGTTGActcggggagaaggacagcaCGAGCCAGACGG
CTATCCGTATCAGTTGCATAACTTTGAAGATACTGTACAGAAGGCCGTAT
TTTGTATCAAAGATGGACTGGATCGATTAATTCGATTTCATCCCGTAGTT
GGAAGTCCATGGGCCAACTGGGCTCATAGGCAACGTCTTCGTACGGTAGG
ATATATCCTGCCGTGGCTGGCGATATGGACTCTTATATTATTAACCTTTA
TCGAGACACCAATGTGGTGCTTGCGGGATCCAAGCACGTGCGATCCCAGA
AGCTCGCAAAGCGAACTCTACCCGCGAGTCACGTCTCGTTTCGTAGGACG
AGCCCCTGCTTTGACGACCGAATTCATCGCCCTGAGCGTATTAGCCGTGG
ACTACATTTTGCAAATAATAGCTGAGGGACTCTTAGTTGTCACATGTCGT
CCTTGGGCACGTGGGTTCTGGCATCAGATGTTGTTGGGTGCCTCTTTTTT
GAGCCTTGTAATTTCTGCcttgtttccctccccatggaCCTTCCGAGTAG
CACCGTTTTTGCGAATACTATTCCTCGCCACCTactcccgccgcctccga
cAAGAGATGCAACTGATTGTACGAATACTGCCTCAGTTCGGGAAGGCACT
TGTGTTGCTCTTATCCTTCTTCTTAGTCTACGCCATTCTCGGGCTATCTC
TTTTTTCATCCACGTCCAAAAACAAGGCCGACGCGCAAGAAGCAGCCCTA
TACTTCCCCAACTTTCGCGGTGCTATCACTAGTGTTTGGAATCTCTTTTT
GTACTGGACGTTTCCGAACATGATGGTCCTTCGGGATCCCGAAACAGGGA
AATACTTGCCACCTAACGTCGTTCTGACCCTGTGGGTCTTTTCCTTCATG
ATCATCGTCATATACTTCGTTCTCAATTTGGCGCTGGCGATCGTCGTCGA
CGTGTATAATGAGCAGaatagagagagagaaaagcgaAGAAAAATGGACA
GGCAGGTGAGCATGGCCCaggccttctccctcctggcgGTGCCTTCGGGG
TTGCCGCCGCATGGAAGTTCCGGTCAAGTGGAGGCGTGGGCCGCAGTGGA
AGATAGCTTGATGATGCCGGCAACAAACGATCCCTTCTTCCGGCCCTTGG
CCTCGGTTGCACGCTCATCTTTCGTTGGGGCATCGGCCTCCATGTCAACG
CCTACAGCCGTCTCCTCTCctgctttgccttcctccacggcccccgtCCA
AGCCGTCCCAGGCCACGTCATGCGCcaagccctccttctgctctccacct
tctcctccgttcCTCGACTGACCGCGCAtaccctcgacctcctcctcggc
aacCTCACAAAGGGCGATGACGGCTGGGTACGCAAAGCATCATTCATGCG
ACTGCCCGACCTTTTGGCTGCCGTGTCCCGCAAGCAGAACCACCGACAGC
CTGGAATGCATCGCCACCACTACCATCGACGGCAGCAGAAGCACCATGGG
GAGAGAACAATAGCACAAGGCGCTTATGTACATGCgggagccggagggga
agagggaggggaggacgaggaggaggatggaggcggggaggaagacgagg
gggaaggcaggatgCGTTTCGTCGACCTGTGGTGCCCGCGGCTGGCATCT
TCGCGGATATTTGCGTACGTCAGTGTCTTCGTGCAAAGCGCCTTCCTGGA
GTACTTTATCGACGCCGTCATCATCGCCAACCTGGCCCTGGCGATTGCGG
CCAACGGGAATGGCGCCCCTCCGTCCAGCCCGGGACCCACGCCTGCTCCC
GATCTCACTTCGACGACGGTGAGGACGTTGTTCACTATGGGGGCAGAATT
TCACGGAGcagtagaggagggagctgCGTCCAAAGAAACGCTTTTGTCCC
ACAGGGATTTCAGTTTTATGGCCGCGGGCATATTTACCCTCGAAGCCGTG
GCGAAGCTCTTTGTGTACGGTTGGAAGCAATATGTGGCTTCTTACATGAA
CCTGTTCGATGCCACTTTGACCCTTTTGACCGTTGGGGGCGCGATAtacg
aggtggtggggagcTGCGGGGGCACCGGCCATCAAGGCTCTCAATTCCAC
CAACCCTTTCTCGTGTTTGAGCTGCTCCGAATCCTCCGGCTCTTTCGCGC
CCTAATGGCCATCCCACAGTTTCGGTCCACAGGTCATGCCTTCTTGaaaa
tccttccctccgcctcttccctcttccttaaCCTTTTCGCGGTGACCTTC
CTGTTTGCGGCTTGCGGCCTGGAAATCTACGGAGGCCTGGTGAACACCga
ccccgcccgcccccaacTATCGGTGCTAACTCCAACTTACTACTATGAAA
ATGGTCTCTTTCTATTTAATTTCAACGATCTAGGCGGGGGTTTCATTATT
CTGGTTGAGATCCTTATCGATTCCTCTTTAATCCAGCCATTCTATGAGGC
TTTTGGAGCCTTGGTAGAGGGAAATGGGGCAGGAGCGCGCGTGGGTACGC
TCATATTCTTTGTACTGTACTACTGCATTGGACAGCTCGTGGTGCTCAAC
ATTGTCGTCGCCTTTATCTTGGATGCATTTATGTATGAATctgagaaaga
agaggagggattggaAGAAAACAGAGCTTCAAGACGGGCGATGAGGCGCC
AACCAGAAGGTGGGGAATTAAGTCGTGAGAAGGGGTCGCTCTAG back to top
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