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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF3119 |
| Orig transcript id | gnl|cribi|Naga_100065g2.7389.mrna |
| Orig protein id | gnl|cribi|Naga_100065g2.7389 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:478114..479387 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8918 ID=rna8918|Name=rna8918|organism=Nannochloropsis gaditana|type=mRNA|length=647bp
AGCGCCGGCCGGACGCCTCACTGTCACACCCCTCTCGTCACGGTACTGAA
GGGGGCCAGGAGCTCGTGACAGCTTATCGCACCCATCGATTTTCGACAGC
GTCTGTCGAAAACTTAAAAAAGTCATGCTCCCCTTGTCGCTTCTAAAAAC
GGCGCAAGGCCACCCCATGCTCGTGGAACTGAAGAATGGGGACACGTACA
ATGGCCGACTGGTTTCGTGCGACACTTGGATGAACATCACATTGAGGGAT
GTCATCTGCACTTCCAGGGATGGAGACAGGTTCTGGAAGATTCCGGAGTG
CTACGTCCGGGGAAACAGCATCAAGTACCTGCGGGTGCCGGAGGAGGTGA
TCGACATGGTTAACGAGGAGGACCTGGAACGGGAACGTACGTACAATACC
TTGTCTTCCCCCTTTGTCTCTCATCTTTTGCCCCGGGAAGCCCGTCACTG
GCAAGTATGTCCCGGGCTCTCGAAGAGCGGGCGTGTAGGAGGCTGGACTC
GAAGGCCTTGAGGACCGCGACTCCTTCCTTCGCGCATACCCGGACTGGGA
GTGGCTTTAGCATGCTTTTGCACGTCCATCTTATTGTTCATTTGACATGC
TATCCCCATCACTCTCACACAATTCGAACGCTTCGCACTGATCGTGG back to topprotein sequence of rna8918 >rna8918-protein ID=rna8918-protein|Name=rna8918|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNS
WGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLA
LIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWT
YTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRK
YVPLPGK back to topmRNA from alignment at KK037250.1:478114..479387+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8918 ID=rna8918|Name=rna8918|organism=Nannochloropsis gaditana|type=mRNA|length=1274bp|location=Sequence derived from alignment at KK037250.1:478114..479387+ (Nannochloropsis gaditana)
ACGTTACCTATTATGCCCCTTGAGGCCCTACATCCAATTATCACACCGTG
CTTCTTCCAGGAAAAACTCATGATGCCTATGTATCCTCAGGTGGTACCAT
GCTCGCTCTTCGCACAGCATTTTTCATCCTTTTGCCCGCTCTGGCTGCCG
GGTTCCTCATGCCGACGCCCTCTTTGTCTAAGCCTTTCAGGTGCGTTGGA
CTCGTCCTTATACCCATAAAAACACTCAACTTTGTTAATTTTCCCAATAA
TCTTAAATTTGCTAACTTGTATTACCTCATGATCAATGATGATCGCTTGA
TTTTTCCACATAAGCAGCATTATCACTCGCTCCCGAGGTGTTCCGGCCCG
TCTGCCCGTCACTGCGCTCAACAGTTGGGGtgggaaaaaacaaaaaacTA
CCCGTGTAGCAGTAGAACCAGAGGTTATTGCGCCTGATTATCGTGTGGCT
GCCGGATTTTTCCTCGGTGGGGTTGGCTtggcgcttccccctctgtcaAA
TCCCGGCGCGGGTTTGCCGTTGGCCTTAATAGGCGCTTTCTTAGCAAGCC
GCACCCAAAAAGTACGTTTTGTTTTCGATGAGGAAGCAATGGAAGTCATG
ACTGTTGGCGCTGACGGTCAGTCTCTGTCGATGGAGCGGGAAAATTTTGC
CGTGGGGGGGCGCAATCGCTGGACTTACACGAGTTTCACGAACTGGGAGG
TAAGAATCAATCgttcattttttctttgcgACCGTGCGCGTAAAATGTCG
CGTGGATGTTTGTCTAAATATTGGAATTTCTGCTTGCTTCATTCTCCCCC
ACCTCTACTTCAACTATATTTGCACCTCGGgtctcccgctctcccccgcc
ttctgcCCCGTCACTTCCCGGCAGTTCTACCCCTCCGAGCAAGTGCCTGT
CCTGGTCTATTTCAAAGAGACGCAGACCAAGCCAGAGGGACAAATCCACT
TCTTCCCCGTGATTGGAAACCCGGCCAGGCTCCTGGAAAATTTCAGGAAG
TACGTGCCTTTGCCCGGGAAATGAGGGatcgggaagggaggacaggggcg
gtggggaggcagggcggatCATGACGTGTTGTGATTGCAGCGCCGCAGCG
GTTGAAAAATAGGAGTGGTAGTTGAAATACGATTGGGGCCTGTTCGGCAG
TGCTgaaaggaaagacagggGACTGAACACGCACGGCTTGTTATGGTGTG
GCTCACGGTGAAAGCTCCCAAGCAATCATGGCATTGCTCGCTCTCGTCTT
TTGTTTTGCTTTCGATGTCCGTAG back to topCoding sequence (CDS) from alignment at KK037250.1:478114..479387+ >rna8918 ID=rna8918|Name=rna8918|organism=Nannochloropsis gaditana|type=CDS|length=1872bp|location=Sequence derived from alignment at KK037250.1:478114..479387+ (Nannochloropsis gaditana)
ATGCTCGCTCTTCGCACAGCATTTTTCATCCTTTTGCCCGCTCTGGCTGC
CGGGTTCCTCATGCCGACGCCCTCTTTGTCTAAGCCTTTCAGCATTATCA
CTCGCTCCCGAGGTGTTCCGGCCCGTCTGCCCGTCACTGCGCTCAACAGT
TGGGGtgggaaaaaacaaaaaacTACCCGTGTAGCAGTAGAACCAGAGGT
TATTGCGCCTGATTATCGTGTGGCTGCCGGATTTTTCCTCGGTGGGGTTG
GCTtggcgcttccccctctgtcaAATCCCGGCGCGGGTTTGCCGTTGGCC
TTAATAGGCGCTTTCTTAGCAAGCCGCACCCAAAAAGTACGTTTTGTTTT
CGATGAGGAAGCAATGGAAGTCATGACTGTTGGCGCTGACGGTCAGTCTC
TGTCGATGGAGCGGGAAAATTTTGCCGTGGGGGGGCGCAATCGCTGGACT
TACACGAGTTTCACGAACTGGGAGTTCTACCCCTCCGAGCAAGTGCCTGT
CCTGGTCTATTTCAAAGAGACGCAGACCAAGCCAGAGGGACAAATCCACT
TCTTCCCCGTGATTGGAAACCCGGCCAGGCTCCTGGAAAATTTCAGGAAG
TACGTGCCTTTGCCCGGGAAATGAATGCTCGCTCTTCGCACAGCATTTTT
CATCCTTTTGCCCGCTCTGGCTGCCGGGTTCCTCATGCCGACGCCCTCTT
TGTCTAAGCCTTTCAGCATTATCACTCGCTCCCGAGGTGTTCCGGCCCGT
CTGCCCGTCACTGCGCTCAACAGTTGGGGtgggaaaaaacaaaaaacTAC
CCGTGTAGCAGTAGAACCAGAGGTTATTGCGCCTGATTATCGTGTGGCTG
CCGGATTTTTCCTCGGTGGGGTTGGCTtggcgcttccccctctgtcaAAT
CCCGGCGCGGGTTTGCCGTTGGCCTTAATAGGCGCTTTCTTAGCAAGCCG
CACCCAAAAAGTACGTTTTGTTTTCGATGAGGAAGCAATGGAAGTCATGA
CTGTTGGCGCTGACGGTCAGTCTCTGTCGATGGAGCGGGAAAATTTTGCC
GTGGGGGGGCGCAATCGCTGGACTTACACGAGTTTCACGAACTGGGAGTT
CTACCCCTCCGAGCAAGTGCCTGTCCTGGTCTATTTCAAAGAGACGCAGA
CCAAGCCAGAGGGACAAATCCACTTCTTCCCCGTGATTGGAAACCCGGCC
AGGCTCCTGGAAAATTTCAGGAAGTACGTGCCTTTGCCCGGGAAATGAAT
GCTCGCTCTTCGCACAGCATTTTTCATCCTTTTGCCCGCTCTGGCTGCCG
GGTTCCTCATGCCGACGCCCTCTTTGTCTAAGCCTTTCAGCATTATCACT
CGCTCCCGAGGTGTTCCGGCCCGTCTGCCCGTCACTGCGCTCAACAGTTG
GGGtgggaaaaaacaaaaaacTACCCGTGTAGCAGTAGAACCAGAGGTTA
TTGCGCCTGATTATCGTGTGGCTGCCGGATTTTTCCTCGGTGGGGTTGGC
TtggcgcttccccctctgtcaAATCCCGGCGCGGGTTTGCCGTTGGCCTT
AATAGGCGCTTTCTTAGCAAGCCGCACCCAAAAAGTACGTTTTGTTTTCG
ATGAGGAAGCAATGGAAGTCATGACTGTTGGCGCTGACGGTCAGTCTCTG
TCGATGGAGCGGGAAAATTTTGCCGTGGGGGGGCGCAATCGCTGGACTTA
CACGAGTTTCACGAACTGGGAGTTCTACCCCTCCGAGCAAGTGCCTGTCC
TGGTCTATTTCAAAGAGACGCAGACCAAGCCAGAGGGACAAATCCACTTC
TTCCCCGTGATTGGAAACCCGGCCAGGCTCCTGGAAAATTTCAGGAAGTA
CGTGCCTTTGCCCGGGAAATGA back to top
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