EWM21798.1, cds8888 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|585102134|gb|EWM21798.1| (Protein of unknown function DUF3119 [Nannochloropsis gaditana]) HSP 1 Score: 416.387 bits (1069), Expect = 3.811e-147 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
Query: 1 MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVPLPGK 207
MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVPLPGK
Sbjct: 1 MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVPLPGK 207
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|553179449|ref|XP_005852703.1| (hypothetical protein NGA_0681310 [Nannochloropsis gaditana CCMP526] >gi|422295829|gb|EKU23128.1| hypothetical protein NGA_0681310 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 414.461 bits (1064), Expect = 2.205e-146 Identity = 206/207 (99.52%), Postives = 206/207 (99.52%), Query Frame = 0
Query: 1 MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVPLPGK 207
MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTY SFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVPLPGK
Sbjct: 1 MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYASFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVPLPGK 207
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|873227988|emb|CEM17412.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 145.206 bits (365), Expect = 5.778e-40 Identity = 93/205 (45.37%), Postives = 123/205 (60.00%), Query Frame = 0
Query: 1 MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADG--QSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVP 203
ML L +AF ++P + PSLS RS G + + + KK ++ E V+ PD+R+AAGF GG L L +N AG+P+ LIGAFLA +T +VRF FD +++EV + DG ++L+ +NFAVGG NRW Y +FTNWE YPS +P+LVYFKETQT PEGQIHFFPVI N +L E + P
Sbjct: 15 MLQLSSAFTSVIPEPTSMIPSRQPSLSLRNMRARRSGGASSLSMLGNFFNSDPKKAAVSKAKYETVVVPPDFRLAAGFVAGGAALCLA-ANNYAAGVPIGLIGAFLALQTTRVRFEFDADSLEVKILKKDGDAETLADSGDNFAVGGANRWKYDTFTNWEMYPSPSLPILVYFKETQTIPEGQIHFFPVIMNGRKLYEIMEERCP 218
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|298710251|emb|CBJ26326.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 138.272 bits (347), Expect = 1.616e-37 Identity = 71/165 (43.03%), Postives = 103/165 (62.42%), Query Frame = 0
Query: 39 VPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVP 203
+P+R TA +++++ + + V+ D+++ G + GLA+ L N GAG P++++G LA + +V+F FD+ AMEV +G L EN VGG +RW Y ++TNWE YPSE++P+L+YFKETQTKPEGQIHFFP I P LL+ R VP
Sbjct: 48 IPSRCVATA-----ERRRRSGDLGMSTVVVPSDFKLPIG--IAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEV-KIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVRARVP 204
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|125552271|gb|EAY97980.1| (hypothetical protein OsI_19899 [Oryza sativa Indica Group] >gi|222631531|gb|EEE63663.1| hypothetical protein OsJ_18481 [Oryza sativa Japonica Group]) HSP 1 Score: 125.946 bits (315), Expect = 5.714e-33 Identity = 80/183 (43.72%), Postives = 104/183 (56.83%), Query Frame = 0
Query: 20 LMPTPSLSKPFSIIT--RSRGVPARLPVTALNSWG----GKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLE 196
+M T SLS P + + +GV + A SW G+K KT R + P+ PDYR+ + G+ A N A P+ L+G L +T +VRFVFD+EA+EV G L EN VGG+NRW Y++F NWE + Q P+LVYFKETQTKPEGQIHFFPVI N +L +
Sbjct: 1 MMSTLSLSSPLFLAAPPKVQGVISCRAALASASWNSVMLGRKSKT-RETIVPD---PDYRLP--IVILGIAGAFAYADNLLAAAPVGLLGCLLLFQTTRVRFVFDDEALEVKV----GDQLEESGENVFVGGKNRWRYSTFVNWELW-WPQFPILVYFKETQTKPEGQIHFFPVIFNGRQLYD 172
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|1002267152|ref|XP_015637902.1| (PREDICTED: uncharacterized protein LOC4338730 [Oryza sativa Japonica Group] >gi|937919001|dbj|BAS93919.1| Os05g0401200 [Oryza sativa Japonica Group]) HSP 1 Score: 124.79 bits (312), Expect = 2.362e-32 Identity = 81/193 (41.97%), Postives = 106/193 (54.92%), Query Frame = 0
Query: 20 LMPTPSLSKPFSIIT--RSRGVPARLPVTALNSW------GGKKQKTTRVAV--------EPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLE 196
+M T SLS P + + +GV + A SW GG++++ T V V E V PDYR+ + G+ A N A P+ L+G L +T +VRFVFD+EA+EV G L EN VGG+NRW Y++F NWE + Q P+LVYFKETQTKPEGQIHFFPVI N +L +
Sbjct: 1 MMSTLSLSSPLFLAAPPKVQGVISCRAALASASWNSVMVHGGRQRRATIVNVLGRKSKTRETIVPDPDYRLP--IVILGIAGAFAYADNLLAAAPVGLLGCLLLFQTTRVRFVFDDEALEVKV----GDQLEESGENVFVGGKNRWRYSTFVNWELW-WPQFPILVYFKETQTKPEGQIHFFPVIFNGRQLYD 186
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|224000848|ref|XP_002290096.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973518|gb|EED91848.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 122.865 bits (307), Expect = 2.558e-31 Identity = 74/184 (40.22%), Postives = 103/184 (55.98%), Query Frame = 0
Query: 25 SLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAP-DYRVAAGFFLGGVGLALPPLSNPGA---GLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQT-KPE----GQIHFFPVIGNPARLLENFR 199
+L KP + + G P L+ GG + V P+V+ DY++AA F V + + ++ G G +AL+G+ A + ++RFVFD++ E+ V AD + L+ EN VGG NRW+Y SF NW+FYPS P+LVYFKETQT KP+ GQIHFFP I N +L E F
Sbjct: 33 TLVKPLA----ADGNPFNFFKDVLSPSGGDAEVAAPVPAIPDVVVDSDYKLAAAFGAAAVSIVIATDASVGGSIFGGLIALLGSLFAVQATRIRFVFDQDCFELKAVDADTKQLADSGENIVVGGANRWSYDSFVNWDFYPSVDFPILVYFKETQTPKPDGGEPGQIHFFPAIANCKQLEEQFE 212
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|573944040|ref|XP_006654375.1| (PREDICTED: uncharacterized protein LOC102721274 [Oryza brachyantha] >gi|1002855650|ref|XP_015692811.1| PREDICTED: uncharacterized protein LOC102721274 [Oryza brachyantha]) HSP 1 Score: 120.553 bits (301), Expect = 1.260e-30 Identity = 77/195 (39.49%), Postives = 102/195 (52.31%), Query Frame = 0
Query: 2 LALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLE 196
L+L + F+ G + L P R G T +N G K + TR + P+ PDYR+ + G+ A N A P+ L+G L +T +VRFVFD++A+EV G L EN VGG+NRW Y++F NWE + Q P+LVYFKETQTKPEGQIHFFPVI N +L +
Sbjct: 5 LSLSSPLFLAALPKVRGVISCRADLGSPSRNSVRVHGGRQLRRATIVNVIGRKSK--TRETIVPD---PDYRLP--IVILGIAGAFAYADNLLAAAPVGLLGCLLLFQTTRVRFVFDDQALEVKV----GDQLESSGENVFVGGKNRWKYSTFVNWELW-WPQFPILVYFKETQTKPEGQIHFFPVIFNGRQLYD 187
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|242061310|ref|XP_002451944.1| (uncharacterized protein LOC8059104 [Sorghum bicolor] >gi|241931775|gb|EES04920.1| hypothetical protein SORBI_3004G124400 [Sorghum bicolor]) HSP 1 Score: 119.783 bits (299), Expect = 3.055e-30 Identity = 83/204 (40.69%), Postives = 114/204 (55.88%), Query Frame = 0
Query: 2 LALRTAFFILLPALA---AGFLMPTPSLSKPFSIITRSRGVPARLPV------TALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLE 196
L+L + F+ PA A + + + S+S P ++ +G +R+PV A+ S G+K+ T + V P+ PDYR+ G+ A N A P+ L+G L +T +VRFVFD EA+EV G L EN VGG+NRW Y++F NWE + Q P+LVYFKETQTKPEGQIHFFPVI N +L +
Sbjct: 5 LSLSSPLFLGAPARARDAISYGVASASIS-PTTVNVLGKGYTSRVPVREQQRRMAIVSVLGRKKSTAKETVVPD---PDYRLPIAIL--GIASAFAYADNLLAAAPVGLLGLLLLFQTTRVRFVFDNEALEVKV----GDQLQESGENVFVGGKNRWKYSTFVNWELW-WPQFPILVYFKETQTKPEGQIHFFPVIFNGRQLYD 197
BLAST of EWM21798.1 vs. NCBI_GenBank
Match: gi|470101728|ref|XP_004287321.1| (PREDICTED: uncharacterized protein LOC101296996 [Fragaria vesca subsp. vesca]) HSP 1 Score: 117.087 bits (292), Expect = 2.606e-29 Identity = 74/151 (49.01%), Postives = 94/151 (62.25%), Query Frame = 0
Query: 47 ALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWE-FYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLE 196
+ S G+K KTTR V PE PDYR+ L G+ L +N P+ L+G L +T +VRFVFDEEA+EV G+ L EN VGG+NRW Y+SF NWE ++P+ P+LVYFKETQTKPEGQ+HFFPVI N +L +
Sbjct: 50 VVTSVSGRKVKTTRETVIPE---PDYRIP--IVLLGLSGGLAYTNNLLPAAPVGLLGLLLLFQTTRVRFVFDEEALEVKV----GEELENSGENVFVGGKNRWKYSSFVNWELWWPN--FPILVYFKETQTKPEGQVHFFPVIFNGKQLYD 189 The following BLAST results are available for this feature:
BLAST of EWM21798.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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