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Properties
| Property Name | Value |
|---|
| Product | selw selh selenoprotein |
| Orig transcript id | gnl|cribi|Naga_100065g22.7385.mrna |
| Orig protein id | gnl|cribi|Naga_100065g22.7385 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:423734..424533 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8900 ID=rna8900|Name=rna8900|organism=Nannochloropsis gaditana|type=mRNA|length=2126bp
CTGAAGGCTGACGGCTGTACCTAGCAACACATTGATATCTAACCTCCTGG
CCCCCATTACGCTTGGCACGTGCTTTACCACCACCGACCACGATCGCAGG
TGCACGACCTCTAGTGGGTATGTTACACGCACATCTAACAAACTAATATT
TTCTCCACTGCAGGACAAGCATGCTATTCCGATCTTCTATTTGTTGCTTC
ATGACAATCGCGACTTCTGCCTTCCAGCGCTCAGTATCCGGTGCCGCCGC
CCGCCGAGGCGCGATTGTCGGAGGTTTCCTAGCGCCATCGGGTGCCATTT
TCCCTCCTGTGGCAGGAAAAAACATTCAATCCAGAACAAGTCGCTCATCT
ACTCCTTCATCATCATTCGTTGGACGCCGGGGTGGTGGTGGCTTGTGGCC
ATTCCACGGCACGATCCGTCTCTTTTCCTCCACCCTCAGCAACAGCATTC
CACTGCGTTCACAGCCTCCCGCAGTGGCCAAGCTCCAGTCTTTTTCCGGT
GTAGGCGACGCAACTTTCAAAGGAGACTTGCTGGTCCTGCCCGCCTTTCA
ATCCGAGGAGGATGGGGACGACGTGCGCTTGGCTGTGAGTGGCCAAGCCA
TCCTGGCCGCTTGGGACGAAGCCCTGGGAGGCGCAGTGACGGATTTAATC
GAGACGAAGGACTTCAAAGGCAAAGCTGGATCGGTAGCGCGTGTCCGACT
CGGCAGGGGTGCGGAAGTCAAAAGTCTCACATTGGTGGGGATGGGTAAGA
AGAGCACGTTCAAGAATTCGCGTGCGCTGGGTCCAGCGGCCGCTACGGAT
ATCAAGGCGGAGAAACCGAAAACAATCGCCGTGGTCTTGCCCAGTGAAGA
TGACTTAGGCCTGGTGTCGGAGGAGGTGCTTTCTGGCCTGTACTTGGACA
ACAGGTTCAAGACCGGGGAGGGCGTGGAGAAAGCCGCGCAGGTGGAGAGC
CTTACGTTCTTCGGTGCCGGGGAGGACCAGGCCCCGGCCTTACGACAGGC
CCAAGCCTTTGCGGAGGGCGTGCGCCTGACCAAGGACTTGGTCGGCGCTC
CTGCCAACTACGTGACACCCAAGGCGTTGGCGGACACCGCCCGGGCTATC
GCGGAGGAGCACGCGGGATGGGAGGTGAAGGTGATGGGGCAGCGGGAGTG
CGAGGCCTTGAAGATGGGGGCCTACCTGGCGGTCGCGCAAGGATCCAAGG
ACCCGCCCGAGTTCATCCACCTCTCCTATAAGCCGCCGGGCGTTCCCAAG
AAGAAGCTCGTCTTGGTGGGGAAGGGGCTGACGTTTGACAGCGGGGGCTA
CAACCTCAAGGCGGGCGCCGGGTCCATGATCGAACTCATGAAATTCGACA
TGGGGGGGGCCGGGGCCGTGTTGGGGGCAGCCAAGGTCCTGGCGGGACTT
GCCTCGGAGGGCGTGGAGGTGCACGTGATCGTGGCAGCCTGTGAGAATAT
GATCAGCGCCCAGGCGTACCGTCCCGGCGACATACTCCAGGCTTCGAACG
GGAAGACGATCGAGGTGCTCAACACGGACGCCGAGGGCCGACTCACCCTG
GCCGACGCCTTGGTGTACGCCGAGAAATTAAAGCCTGATGCCATTGTAGA
TGTGGCCACTCTGACGGGGGCTTGTATCATTGCCTTGGGAGGGGACTACG
GTGGGATGTGGACCGGGGACGACACGCTGGCTTCAAGCCTGGAAGCCGCC
GCCTCCGCCAAGGGGGAAAGGTTTTGGCGCATGCCGCTTGCGGAAGAATA
CAAACCCAACATTAAGAGTGAAATTGCTGATTTGAAGAATGTGGGGGGAC
GGGAAGGGGGTTCAATCACTGCAGCCTTGTTCTTGCAAGAATTTGTCTCG
AAGACGACGCCTTGGGCGCATCTGGATATTGCAGGCCCAGTCTGGAATCC
GAAGAAGGGAGGAGCGACAGGCTTTGGGGCCCGCACATTAGCTGAGTGGG
TCCTTTCTCAGGCGAAGTCGTAGAGGAGTACTTTGGGGCAAGGAAACCTT
AAGAGCGTATTTGTCGTCGGGGAAGGAGGGGAGATAGAGGGGGATATGCG
CAGAAGCCATGCGTGGGAGAACCGATAACCCGGCGAAACACGTCAACACG
ATAAAAATAAATCAGCGCTATCGTTT back to topprotein sequence of rna8900 >rna8900-protein ID=rna8900-protein|Name=rna8900|organism=Nannochloropsis gaditana|type=polypeptide|length=185bp
MAEMVLRHFSKRVVTGFFPLLIFYNLPQLSAFLTPGLSACTHFGKRPDGR
GINTVLNLPLVLYSYSSTDLEQAPQQASRDRVSLSLPPDYNRVEISYCTG
CRWMLRAAWLAQELLTTFQDEVQEVAIQPVKDPAGTFEVRLNNRILFDRK
AQGRFPEVKEIKQLVRDVVDPARNLGHSDKKESAF back to topmRNA from alignment at KK037250.1:423734..424533- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8900 ID=rna8900|Name=rna8900|organism=Nannochloropsis gaditana|type=mRNA|length=800bp|location=Sequence derived from alignment at KK037250.1:423734..424533- (Nannochloropsis gaditana)
AGCATCACCATCCACAGGCCGCTGGCAATGGCAGAGATGGTCTTGCGGCA
TTTTTCCAAGCGTGTCGTGACAGGCTTTTTCCCCCTCTTGATATTTTACA
ATCTACCCCAATTAAGGTAAGCAAAGACTGCTATTATGAGGACGGAGGGG
TGAGCTAAATATACACGAGTCACGATTTCATAAGTTGTGCCAGTCAAACT
CATTCATTTATACTACCAAATGATAGTGCTTTTTTGACTCCTGGTCTGTC
TGCTTGTACACACTTTGGGAAACGTCCAGATGGGAGAGGTATAAATACTG
TCTTGAACCTCCCACTTGTCCTTTACTCCTACTCGTCCACCGACCTGGAA
CAAGCGCCCCAGCAAGCGTCGCGGGACCGCGTCAGCTTATCTCTTCCACC
TGATTATAACCGCGTTGAGATAAGTTATTGCACTGGTTGTCGATGGATGT
TACGTGCCGCCTGGTTAGCGCAAGAACTATTGACAACCTTTCAAGACGAA
GTGCAGGAGGTTGCTATCCAACCAGTCAAAGATCCAGCGGGAACATTTGA
AGTCCGACTGAACAATCGCATTCTCTTTGATCGGAAAGCTCAGGGTCGCT
TTCCAGAAGTGAAAGAGATCAAACAGCTTGTGCGTGACGTGGTTGACCCA
GCCCGCAACTTGGGTCATTCTGACAAGAAAGAATCGGCTTTTTGAAGTTT
TGTGACAATTACGTGGACCACACCAAAGTAACGACAAACGATAGCGCTGA
TTTATTTTTATCGTGTTGACGTGTTTCGCCGGGTTATCGGTTCTCCCACG
back to topCoding sequence (CDS) from alignment at KK037250.1:423734..424533- >rna8900 ID=rna8900|Name=rna8900|organism=Nannochloropsis gaditana|type=CDS|length=1116bp|location=Sequence derived from alignment at KK037250.1:423734..424533- (Nannochloropsis gaditana)
TGCTTTTTTGACTCCTGGTCTGTCTGCTTGTACACACTTTGGGAAACGTC
CAGATGGGAGAGGTATAAATACTGTCTTGAACCTCCCACTTGTCCTTTAC
TCCTACTCGTCCACCGACCTGGAACAAGCGCCCCAGCAAGCGTCGCGGGA
CCGCGTCAGCTTATCTCTTCCACCTGATTATAACCGCGTTGAGATAAGTT
ATTGCACTGGTTGTCGATGGATGTTACGTGCCGCCTGGTTAGCGCAAGAA
CTATTGACAACCTTTCAAGACGAAGTGCAGGAGGTTGCTATCCAACCAGT
CAAAGATCCAGCGGGAACATTTGAAGTCCGACTGAACAATCGCATTCTCT
TTGATCGGAAAGCTCAGGGTCGCTTTCCAGAAGTGAAAGAGATCAAACAG
CTTGTGCGTGACGTGGTTGACCCAGCCCGCAACTTGGGTCATTCTGACAA
GAAAGAATCGGCTTTTTGAATGGCAGAGATGGTCTTGCGGCATTTTTCCA
AGCGTGTCGTGACAGGCTTTTTCCCCCTCTTGATATTTTACAATCTACCC
CAATTAAGTGCTTTTTTGACTCCTGGTCTGTCTGCTTGTACACACTTTGG
GAAACGTCCAGATGGGAGAGGTATAAATACTGTCTTGAACCTCCCACTTG
TCCTTTACTCCTACTCGTCCACCGACCTGGAACAAGCGCCCCAGCAAGCG
TCGCGGGACCGCGTCAGCTTATCTCTTCCACCTGATTATAACCGCGTTGA
GATAAGTTATTGCACTGGTTGTCGATGGATGTTACGTGCCGCCTGGTTAG
CGCAAGAACTATTGACAACCTTTCAAGACGAAGTGCAGGAGGTTGCTATC
CAACCAGTCAAAGATCCAGCGGGAACATTTGAAGTCCGACTGAACAATCG
CATTCTCTTTGATCGGAAAGCTCAGGGTCGCTTTCCAGAAGTGAAAGAGA
TCAAACAGCTTGTGCGTGACGTGGTTGACCCAGCCCGCAACTTGGGTCAT
TCTGACAAGAAAGAATCGGCTTTTTGAATGGCAGAGATGGTCTTGCGGCA
TTTTTCCAAGCGTGTCGTGACAGGCTTTTTCCCCCTCTTGATATTTTACA
ATCTACCCCAATTAAG back to top
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