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Properties
| Property Name | Value |
|---|
| Product | Peptidase aspartic |
| Orig transcript id | gnl|cribi|Naga_100399g2.1190.mrna |
| Orig protein id | gnl|cribi|Naga_100399g2.1190 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:401370..404241 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8890 ID=rna8890|Name=rna8890|organism=Nannochloropsis gaditana|type=mRNA|length=1535bp
GAAGTAAATGAGGTGTGCTCGTCGATTGGTTGACCACAGCGCTCGTTGGA
TGCAGTGTGCGCTTTAAGTTTGGTGCCCGATGCTTGCTTGGCTCCTGTCC
CCGTCGCTACGATCATCGCCTGCTTGGAGAGAGGGGCGTGCGCAGCCTTG
AGACCATGATCGGTTGCCTCGCCTCTGTTTTGCCTGAACCCCGATTTCTC
AATGCCTGTTAGGCCGAGCTCACTATCACGATATGCGGGCCGGACCTCTA
CTATTAAATGATCTGTGCTCACCAGAAGGATGCTTAGCGTGGTTCCCAAA
GTAGCTCTACCCAACACGTCCTTGTACAGCGTGTCGGGCTTTGAACCCTT
CGACTTCAGTCACTTTTCCCCCTCCTTCCCGGTTTTTATGCATTACTTGG
ACAGGCTGGGGCCTTCTATATTTGATTGATTGCTACGGTAGGATCCTCAG
TAGCTCGTGTCGTGCAGTCCACCATGCAATCTGCCTTGCCCGCGTGGCTC
TGGCGAGACCCGCGGCCTCTTTACGCATCGAGTCGCTACAAGACAGCAGA
TCCAGAGAGTCCCGTCCGTTTTGTCCAAGTATTTCAATCGTTGCCATGGC
TAGAGCCCTTTTACATGGAGTGGGAGAAAAATTTCGACGTCTCTTCCTCC
TTTCAAGTCATACGGGATAACGAAGCCCTCCCCATCGTCGCCACCATCCT
GTACCTCTCCTTCCTGATAGAGGGCAAAAAATACATCGAGCGCAGGAGGC
GAGAGGGAAAAGGACCAATAAATCTGGGGCTTTTCCCCGCCTTTTGGAAC
GCATTTTTGGCCGCTTTCTCCGTCCTGGGAGCCACGCGCGTCGTCCCCCA
CTTCCTCTTCCTCTTCACGCACAAGGACTTCAAGACGACCGTGTGCGAAG
CCCCCGACAAGGCCGGGTACGGGGACGGGGCGGCGGGGATGTGGGTCATG
CTCTTCACCGTCTCCAAGCTCTTCGAGTTGGTGGACACGGTAATCCTGGT
CCTGAAGGGGAAAGACCCCATGTTCCTACACTGGTACCACCACGTGACGG
TGCTCCTCTACACCTGGTTCTCCTACTCGGCGCGCAACCCGGGAATATAC
TTCGTGGCCATGAACTACTCCGTGCACGCCCTCATGTACTCCTACTACTT
CCTCATGGAGCTCCGGCTCTGGCCCAAGTGGTTCAACCCCATGTGGATCA
CCATGGCCCAGATTCTGCAGATGCTGGTCGGTGTGGGCATCACCGTCTCC
GCCTTTTTCTTCTCCCGCGATCCTTCCTGCGCCCTCGTCCGGGGCCTCAT
TCCCTGGTGCGCCGCCATGTACGCCACCTACCTCTATTTCTTCGTCCTCT
TTTTCCTGGAACGCTTTTTCCCGGCTTTCAAGCCTGCCGCGCCCGGCGCT
GCCCGGGGCCTCTCAGGGGGCAAGGCGGGGAGGACGGGGGGGGGTGGAGG
AGGAGGAGAGGGGGGAGGTCGGTGCCGGCGGCGGGGGAAGGGGGGAGGAG
ACAGCGGCCCGCGTCGAGGAAAGCGGAGTAGATAG back to topprotein sequence of rna8890 >rna8890-protein ID=rna8890-protein|Name=rna8890|organism=Nannochloropsis gaditana|type=polypeptide|length=310bp
MTDGSSNGTAGESVSAVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQS
LTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPG
CDMYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAW
RAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENG
IMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATS
SSRASRDLGEGAAQDGGDQGGGNGLCLPDALPHRLVPGRASRPFPGGPHP
HRVGRSRFSR back to topmRNA from alignment at KK037250.1:401370..404241+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8890 ID=rna8890|Name=rna8890|organism=Nannochloropsis gaditana|type=mRNA|length=2872bp|location=Sequence derived from alignment at KK037250.1:401370..404241+ (Nannochloropsis gaditana)
AGGGACATCGAGCTGGAAAGGAGCGAGCTGCAATTACCAAAAATCAGGAG
TCTCGTGCTCCTTGGTACCTGACTGTACCGCAAAAGTGGCCTAGATAAGA
ACATTTGTGAAGAGAATGGGCTTTTCAAGACGGTCTCTGTGACAAGTGCC
ACTCGTGATTTATTTTGCGGGTGTCTTGCTAGGGATCGCTTGACACTCAT
GAATTCAGAGGGCTTGTACTGAAGTTTAGCTATGAAATGACATCATATTC
GGGCGTTGTCACTATGAAATTATGTCACAAGAAATCATGACATGTTTTGA
AAAAGTGCCACGAGAAAACAAAATGCTCCGCAGTAGTAGTAAAAAGTTGC
CACATATACCCAAACACAATTTGTAAGACTGGgctgccatcctcctcgaa
cGTTGTGACTAATGATGCACTAGCACACAATTACATCTCCTTTCCGCACA
ATTAATACTTATAGCTTTCTGCTATTTGCTATGCCTTACGCTTTACAAAA
TCAGAGACGTCTCTGCACGTTTTTTATCAGCTTTCTTACATTTCTACCTC
ATAGCTGGTGAAAATAGTTGAACATTTCAACTCCTTCCGATTGcctttcc
ttcgtctcccacTGTCTCACGGGCATTACTAGTAGGATTTTCCTAGTGAT
ATCACAAAATTCTCCGACGTGTTTACCACAATCAGGACATGGGGAAAAGC
GTCCTCACGTGAGATTCCCCGTATCAACCATACAACGTTGAAAGCTGCGA
GACCTTATGAATTTCTGGAGCAGTCACATACACTAAATTGCACATGTAAA
GCCTTTTTTTTTCGCGCATTTCAATAGCCGCGAGGAATGTAGTTTAGAAT
GAAAAACATCCAAACATGTTTTCAGCGTCTcacttccccttgcccgtctG
TCTCGCCTACGAAACCAGCGAAGGCTCATGTTCCACGCTTGAAAACCGTG
CCGCTCACGCACTGCGGGCCACCACGGACATTTTAGAAcaacttccctcc
ttcctctttttctgaCCAGGGATCAATGAcggacggcagcagcaatggCA
CTGCCGGTGAAAGTGTCAGCGCTGTACTGCCACTCCGGCGACGTGTGCCA
CCCGCAGCTCGACGCCGTCACGACCGTCGTAGACCTCtgccgtggcggcg
ggggcaagCCGCCTTGTCGCAAAGCCTTACAACGTCAGACTCCTCCCtta
ttttccccctctccacgacgggaggaagccacTATGTCACTCTGGAGATC
GGGACTCCACCGCAGGCGCAGGCAGTTATTGTCGACACGGGCAGTGCCTG
GGTGGCATTTGGGTGTGCTCCTGGCTGTGACATGTACTGTGGCGAACATG
TCCACCCATTCTTTGCGTATAATGAGAGCTCCAGCGCTCGAATCCTCAAA
TGTGGGGAATGCAGCACCCAATGCTTGGATGATTTGTGCCTGGTCACGCA
ACACTACTCCGAGGGCAGCGCGTGGCGGGCCTTCTCGGTGGAGGACAGCG
TTGGTTTTCATACTGAGCCCGGCACGCGCCAGGCTCCAACAAATGTGCCT
CCGACGACCGTTCCCTTTGTGTTCGGTTGCCAGACCAAACTCACGTAGGT
GCATCTTTCTCTTTCGTCGCGAACAATTCATGCTGTGATCAATTCATGCC
GTGATCTgcaccctttccccgcccgggcccgcccCGCCTGTTTCACCTGC
CGCGTCCTTTCTcactccctttttcccctttgcACCTCTCCTTGCGACAG
TGGTCTTTTCGTTCCGCAGCTGGAAAACGGCATCATGGGTCTCTCTCGCG
GCCCTGAGAACCTCGTCTCCCACATGCGGGCCGCCGGGCGCATCCCGCGG
gcggctttctccctctgtTTCCACGAGCATCCTAACGACGGGGGCTGGAT
GACCGTGGGCACTCTCGATGATGCGACCAGCAGCAGTCGTGCCTCGCGGG
ACCTGGGAGAGGGTGCGGcccaggatggaggagaccagggggggggcaat
ggCCTATGCCTCCCtgacgccctcccccaccggcTGGTTCCTGGTCGAGC
TTCGCGCCCTTTTCCTGGGGGGCCACATCCTCACAGAGTCGGACGCTCCC
GTTTCTCCCGCTGActccccctctaccccgCCCACCCGGCGCCGGCATGC
TCTTTTGGACTCGGGAACCACCGACACCTACATGCTGCGCTCACTCCGcc
cctcgttctcctcccaaTTCTCCCGCGCCACCAGGGGGCGTCTCCCTTTC
GTGCCCGGGGCGCCCTACCGGCTGTCCATGTACGAATTACTCCTGCTGCC
CGCCTTGGAGGTGGATCTTggcgaggagcaggcgggggccgagaggacgg
gggcccGTCTGTCCATCCCGCCCATGTCCTATATggaggagcagagggag
ggcgagaatgggaatggggaggagcgggaaagtgagacggaggggcaggg
gcaggtTGCGCGGACAGTGTGGGTGCCGCGCCTGTATTTCACAGAGGCCT
CCCTGGCCATCCTGGGGTCGAACGCCCTCCGCGGTCAGGAGGTGCTCTTc
gacatggagggagggagggtgggggtccggtccctgccctcctgctccca
ccGGCGACGGGCGGCCGCGTTGGCGTGCGAGGAGCAGTGTGGGAGgctct
ctgcctccgcgtcttccccccctgcctcgcctgTTTGTCGTCTGGATGGG
GTCACGGACACGTCTGCCTGCCACGCCACCTGTGGTCTGGCCAGcgaatg
ggaggaagcgactgGCGGTCGCTCCTCCGGCGTCCGTCCCGGCGAGAGAT
TCGGAGCACCCAGTGAGGGAGTCAGCGACGAGGGAACTAGCGTCGATCCC
TGGGGCTCGGACAGGGCGAGCG back to topCoding sequence (CDS) from alignment at KK037250.1:401370..404241+ >rna8890 ID=rna8890|Name=rna8890|organism=Nannochloropsis gaditana|type=CDS|length=1866bp|location=Sequence derived from alignment at KK037250.1:401370..404241+ (Nannochloropsis gaditana)
ATGAcggacggcagcagcaatggCACTGCCGGTGAAAGTGTCAGCGCTGT
ACTGCCACTCCGGCGACGTGTGCCACCCGCAGCTCGACGCCGTCACGACC
GTCGTAGACCTCtgccgtggcggcgggggcaagCCGCCTTGTCGCAAAGC
CTTACAACGTCAGACTCCTCCCttattttccccctctccacgacgggagg
aagccacTATGTCACTCTGGAGATCGGGACTCCACCGCAGGCGCAGGCAG
TTATTGTCGACACGGGCAGTGCCTGGGTGGCATTTGGGTGTGCTCCTGGC
TGTGACATGTACTGTGGCGAACATGTCCACCCATTCTTTGCGTATAATGA
GAGCTCCAGCGCTCGAATCCTCAAATGTGGGGAATGCAGCACCCAATGCT
TGGATGATTTGTGCCTGGTCACGCAACACTACTCCGAGGGCAGCGCGTGG
CGGGCCTTCTCGGTGGAGGACAGCGTTGGTTTTCATACTGAGCCCGGCAC
GCGCCAGGCTCCAACAAATGTGCCTCCGACGACCGTTCCCTTTGTGTTCG
GTTGCCAGACCAAACTCACTGGTCTTTTCGTTCCGCAGCTGGAAAACGGC
ATCATGGGTCTCTCTCGCGGCCCTGAGAACCTCGTCTCCCACATGCGGGC
CGCCGGGCGCATCCCGCGGgcggctttctccctctgtTTCCACGAGCATC
CTAACGACGGGGGCTGGATGACCGTGGGCACTCTCGATGATGCGACCAGC
AGCAGTCGTGCCTCGCGGGACCTGGGAGAGGGTGCGGcccaggatggagg
agaccagggggggggcaatggCCTATGCCTCCCtgacgccctcccccacc
ggcTGGTTCCTGGTCGAGCTTCGCGCCCTTTTCCTGGGGGGCCACATCCT
CACAGAGTCGGACGCTCCCGTTTCTCCCGCTGAATGAcggacggcagcag
caatggCACTGCCGGTGAAAGTGTCAGCGCTGTACTGCCACTCCGGCGAC
GTGTGCCACCCGCAGCTCGACGCCGTCACGACCGTCGTAGACCTCtgccg
tggcggcgggggcaagCCGCCTTGTCGCAAAGCCTTACAACGTCAGACTC
CTCCCttattttccccctctccacgacgggaggaagccacTATGTCACTC
TGGAGATCGGGACTCCACCGCAGGCGCAGGCAGTTATTGTCGACACGGGC
AGTGCCTGGGTGGCATTTGGGTGTGCTCCTGGCTGTGACATGTACTGTGG
CGAACATGTCCACCCATTCTTTGCGTATAATGAGAGCTCCAGCGCTCGAA
TCCTCAAATGTGGGGAATGCAGCACCCAATGCTTGGATGATTTGTGCCTG
GTCACGCAACACTACTCCGAGGGCAGCGCGTGGCGGGCCTTCTCGGTGGA
GGACAGCGTTGGTTTTCATACTGAGCCCGGCACGCGCCAGGCTCCAACAA
ATGTGCCTCCGACGACCGTTCCCTTTGTGTTCGGTTGCCAGACCAAACTC
ACTGGTCTTTTCGTTCCGCAGCTGGAAAACGGCATCATGGGTCTCTCTCG
CGGCCCTGAGAACCTCGTCTCCCACATGCGGGCCGCCGGGCGCATCCCGC
GGgcggctttctccctctgtTTCCACGAGCATCCTAACGACGGGGGCTGG
ATGACCGTGGGCACTCTCGATGATGCGACCAGCAGCAGTCGTGCCTCGCG
GGACCTGGGAGAGGGTGCGGcccaggatggaggagaccagggggggggca
atggCCTATGCCTCCCtgacgccctcccccaccggcTGGTTCCTGGTCGA
GCTTCGCGCCCTTTTCCTGGGGGGCCACATCCTCACAGAGTCGGACGCTC
CCGTTTCTCCCGCTGA back to top
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