EWM21812.1, cds8860 (CDS) Nannochloropsis gaditana

Overview
NameEWM21812.1
Unique Namecds8860
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:402395..402963 +
Alignment locationKK037250.1:403120..403483 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21812.1
ProductPeptidase aspartic
Orig transcript idgnl|cribi|Naga_100399g2.1190.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:402395..402963 +
KK037250.1supercontigKK037250.1:403120..403483 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR001461Aspartic_peptidase
IPR021109Peptidase_aspartic_dom
Homology
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|585102149|gb|EWM21812.1| (Peptidase aspartic [Nannochloropsis gaditana])

HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query:    1 MTDGSSNGTAGESVSAVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQDGGDQGGGNGLCLPDALPHRLVPGRASRPFPGGPHPHRVGRSRFSR 310
            MTDGSSNGTAGESVSAVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQDGGDQGGGNGLCLPDALPHRLVPGRASRPFPGGPHPHRVGRSRFSR
Sbjct:    1 MTDGSSNGTAGESVSAVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQDGGDQGGGNGLCLPDALPHRLVPGRASRPFPGGPHPHRVGRSRFSR 310          
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|553178746|ref|XP_005852598.1| (hypothetical protein NGA_0726900, partial [Nannochloropsis gaditana CCMP526] >gi|422295936|gb|EKU23235.1| hypothetical protein NGA_0726900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 340.502 bits (872), Expect = 4.765e-116
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0
Query:  103 MYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQD 265
            MYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFH EPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQD
Sbjct:    1 MYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHAEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQD 163          
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|813191717|ref|XP_012207741.1| (hypothetical protein SPRG_13375 [Saprolegnia parasitica CBS 223.65] >gi|641527262|gb|KDO21564.1| hypothetical protein SPRG_13375 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 145.591 bits (366), Expect = 4.457e-36
Identity = 91/224 (40.62%), Postives = 122/224 (54.46%), Query Frame = 0
Query:   31 RHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE---CSTQCLDDLCLVTQHYSEGSAWRAFSVEDS--VGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDAT 249
            R D +R LP RR   A + + T        PL    G+HY  L +G PPQ  +VIVDTGS   A  CA   +  CG H  P +   +SS+AR ++C E   CS+ C  D C ++Q Y+EGS W A  V +   VG     G   A T +  + V F  GCQTK TGLF+ Q ENGIMGLS+     ++++ +A R+ R  FSLCF E   +GG M +G  D++ 
Sbjct:   27 RMDLKRDLPLRRRLDAANATTTAPFLKNQVPLGVGAGTHYAELYMGLPPQKASVIVDTGSHLTALPCASCPN--CGTHTDPPYDIAKSSTARFMQCDEFDGCSS-CEQDHCRISQSYAEGSMWSALLVNELCWVGPLDATGGSNATTTMAASGVRFPIGCQTKETGLFIGQKENGIMGLSQDNNTFMAYLVSANRVDRNLFSLCFAE---NGGQMVLGGADESV 244          
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|669164490|ref|XP_008617807.1| (hypothetical protein SDRG_13493 [Saprolegnia diclina VS20] >gi|530730570|gb|EQC28812.1| hypothetical protein SDRG_13493 [Saprolegnia diclina VS20])

HSP 1 Score: 141.739 bits (356), Expect = 1.050e-34
Identity = 90/239 (37.66%), Postives = 126/239 (52.72%), Query Frame = 0
Query:   16 AVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE---CSTQCLDDLCLVTQHYSEGSAWRAFSVEDS--VGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDAT 249
            A+LP    +      R   +R LP RR   + + + T        PL    G+HY  L +G PPQ  +VIVDTGS   A  CA   +  CG H  P +   +SS+AR ++C E   CS+ C  D C ++Q Y+EGS W A  + +   VG     G   A +++    V F  GCQTK TGLF+ Q ENGIMGLS+     ++++ +A R+ R  FSLCF E   +GG M +G  D++ 
Sbjct:   12 ALLPWVMSLDEGRVVRMGLKRALPLRRRLDSAANATTALFLKNEVPLGVGAGTHYAELYMGLPPQKASVIVDTGSHLTALPCASCPN--CGTHTDPPYDIAKSSTARFMQCDEFDGCSS-CEQDQCRISQSYAEGSMWSALLINELCWVGPLDASGESNATSSMAAAGVRFPIGCQTKETGLFIGQKENGIMGLSQDRNTFMAYLVSAKRVDRNLFSLCFAE---NGGQMVLGGADESV 244          
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|585109531|gb|EWM27330.1| (Peptidase aspartic [Nannochloropsis gaditana])

HSP 1 Score: 143.665 bits (361), Expect = 1.183e-34
Identity = 84/187 (44.92%), Postives = 106/187 (56.68%), Query Frame = 0
Query:   60 FPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGEC--STQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNV-PPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVG 243
             PL    G+HY  + +GTP Q  +VI+DTGS W AF C  GC M   +H  P F   +S +   L C EC  S  C D+ C ++  Y+EGS W A+ V D++    E  + QAP       ++PFVFGCQT  TGLF  QLENGIMGLS     +V  +R AG+I    FSLCF E   DGG M +G
Sbjct:  102 LPLHAGYGTHYAFVFVGTPAQRVSVILDTGSHWTAFPCT-GCQMCGDDHTDPVFDVLKSDTFHALDCSECKFSGHCKDNKCSISLAYAEGSRWDAYEVRDTLFLGGE--SPQAPVRGGQDLSMPFVFGCQTYETGLFRTQLENGIMGLSFQDLTIVPRLREAGKIDATVFSLCFTE---DGGSMRIG 282          
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|676389575|ref|XP_009038066.1| (hypothetical protein AURANDRAFT_27859, partial [Aureococcus anophagefferens] >gi|323451574|gb|EGB07451.1| hypothetical protein AURANDRAFT_27859, partial [Aureococcus anophagefferens])

HSP 1 Score: 130.568 bits (327), Expect = 1.825e-33
Identity = 77/183 (42.08%), Postives = 108/183 (59.02%), Query Frame = 0
Query:   67 GSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGEC--STQCLDDLCLVTQHYSEGSAWRAFSVEDSVGF----HTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVG 243
            G+HY  + +GTPPQ  +VIVDTGS   AF C+ GC   CG+H  P+F  ++SS+ R L C +C  + +C+   C V+Q Y+EGS+W+A  ++D+        TE  +R     +     PFVFGCQT  TGLF  Q  +GIMG+S   + LV  MR+A  +   +FSLCF    + GG M +G
Sbjct:    4 GTHYAHVYVGTPPQRVSVIVDTGSHHTAFPCS-GCKS-CGKHTDPYFDPDKSSTLRRLGCSDCVAAARCVTKTCQVSQSYTEGSSWKAVQMKDAYYVGGTSLTEKASRDGSAWIA---TPFVFGCQTYETGLFRTQKADGIMGMSMHAQTLVPTMRSANALGHNSFSLCF---MHGGGTMALG 178          
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|325183199|emb|CCA17657.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 139.428 bits (350), Expect = 3.178e-33
Identity = 86/229 (37.55%), Postives = 117/229 (51.09%), Query Frame = 0
Query:   23 RVPPAARRRHDRRRPLPWRRGQAALSQS--LTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE---CSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLD 246
            R+P A+R     +  L  +  Q     S  L  +D+    PL    G+HY  L IG PPQ  +VI+DTGS   AF C    D  CG H  P F   +S+S   ++C     C T C D+LC++ Q YSEGS W A  ++D +        R A   +    + F FGCQT+ TGLF+ Q+ENGIMGL  G  N+ + M  A R+    F+LCF +    GG   +G +D
Sbjct:    2 RIPSASRNLEPLKIELKRKTRQLKNQTSPPLVYNDA----PLGVGLGTHYAELYIGIPPQRASVILDTGSGLTAFPCDKCVD--CGTHTDPKFDATKSTSINFVQCKYEEGCDT-CRDNLCVIHQRYSEGSMWEAVVMQDLIWVGNVDSDR-AEMIMRRYGIRFKFGCQTRETGLFITQVENGIMGLGIGRNNIATEMYKAKRVEEHKFALCFGQK---GGSFVIGGVD 219          
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|1173935995|gb|OQR87033.1| (aspartyl protease family A01B [Achlya hypogyna])

HSP 1 Score: 137.502 bits (345), Expect = 3.987e-33
Identity = 85/226 (37.61%), Postives = 119/226 (52.65%), Query Frame = 0
Query:   31 RHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE---CSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTN----VPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDAT 249
            R + +R +P RR     + SL         PL    G+HY  L +G PPQ  +VIVDTGS   A  C    D  CG H  P +  ++S++AR + C E   CS +C ++ C ++Q Y+EGS W A  V++         T    +N    +    V F  GCQTK TGLF+ Q ENGIMGLS+     ++++ AAG + R  F+LCF +   DGG M +G  DD+ 
Sbjct:   29 RMELKRNVPLRRRLGNATFSLDA------VPLGVGAGTHYAELYMGLPPQKASVIVDTGSHLTALPCTSCVD--CGTHTDPAYDVSKSTTARFMSCSEFDGCS-KCDNNQCRISQSYAEGSMWSALLVDELCWVGPLDATGAVDSNATQRLQAYGVRFPIGCQTKETGLFIGQKENGIMGLSQDRNTFLAYLVAAGHVDRNLFTLCFAQ---DGGQMVLGGTDDSV 242          
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|1173959842|gb|OQS06028.1| (aspartyl protease family A01B [Thraustotheca clavata])

HSP 1 Score: 134.035 bits (336), Expect = 7.487e-32
Identity = 79/189 (41.80%), Postives = 105/189 (55.56%), Query Frame = 0
Query:   61 PLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE--CSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDD 247
            PL    G+HY  L +G PPQ  +VIVDTGS   A  C+   D  CG H  P +  ++S +AR ++C E    T C ++ C V+Q Y+EGS W A  V++         T  A  N     V F  GCQTK TGLF+ Q ENGIMGLS+   + +S++  A ++   AFSLCF E    GG M +G +DD
Sbjct:   44 PLGVGEGTHYAELYLGQPPQKASVIVDTGSHLTALPCSTCLD--CGSHTDPPYDVSKSQTARFMRCSEFDACTACDNNQCRVSQSYAEGSMWSALLVDELCWIGPMDNT-NASFNGESFGVRFPIGCQTKETGLFIGQKENGIMGLSQSRNSFMSYLYQARKVKHNAFSLCFAE---SGGQMILGGVDD 226          
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|953487136|emb|CEG49198.1| (Aspartyl protease [Plasmopara halstedii])

HSP 1 Score: 134.035 bits (336), Expect = 1.564e-31
Identity = 74/184 (40.22%), Postives = 107/184 (58.15%), Query Frame = 0
Query:   67 GSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGECST--QCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVF--GCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLD 246
            G+HY  + +G PPQ  +VI+DTGS + A  C+   +  CG H    F  + S++A+ +KC E  T   C +D C+++Q Y EGS W+A  VE+ V       +  A   +  T   F++  GCQTK TGLF+ Q ENGIMGL R P +++++M  AGR+ R  F+LCF     DGG +  G +D
Sbjct:   99 GTHYAEIYLGIPPQRASVILDTGSHYTALPCSSCHE--CGTHTDGLFNVSRSTTAKYIKCHEYQTCRSCENDRCIISQSYVEGSMWQAEMVEELVWVGGYSSSNDAMEGLLKT-FGFLYPLGCQTKETGLFITQKENGIMGLGRHPSSILTYMVKAGRVSRNLFTLCF---TLDGGELVFGGVD 276          
The following BLAST results are available for this feature:
BLAST of EWM21812.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102149|gb|EWM21812.1|0.000e+0100.00Peptidase aspartic [Nannochloropsis gaditana][more]
gi|553178746|ref|XP_005852598.1|4.765e-11699.39hypothetical protein NGA_0726900, partial [Nannoch... [more]
gi|813191717|ref|XP_012207741.1|4.457e-3640.63hypothetical protein SPRG_13375 [Saprolegnia paras... [more]
gi|669164490|ref|XP_008617807.1|1.050e-3437.66hypothetical protein SDRG_13493 [Saprolegnia dicli... [more]
gi|585109531|gb|EWM27330.1|1.183e-3444.92Peptidase aspartic [Nannochloropsis gaditana][more]
gi|676389575|ref|XP_009038066.1|1.825e-3342.08hypothetical protein AURANDRAFT_27859, partial [Au... [more]
gi|325183199|emb|CCA17657.1|3.178e-3337.55conserved hypothetical protein [Albugo laibachii N... [more]
gi|1173935995|gb|OQR87033.1|3.987e-3337.61aspartyl protease family A01B [Achlya hypogyna][more]
gi|1173959842|gb|OQS06028.1|7.487e-3241.80aspartyl protease family A01B [Thraustotheca clava... [more]
gi|953487136|emb|CEG49198.1|1.564e-3140.22Aspartyl protease [Plasmopara halstedii][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8890rna8890Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications