EWM21812.1, cds8860 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|585102149|gb|EWM21812.1| (Peptidase aspartic [Nannochloropsis gaditana]) HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 1 MTDGSSNGTAGESVSAVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQDGGDQGGGNGLCLPDALPHRLVPGRASRPFPGGPHPHRVGRSRFSR 310
MTDGSSNGTAGESVSAVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQDGGDQGGGNGLCLPDALPHRLVPGRASRPFPGGPHPHRVGRSRFSR
Sbjct: 1 MTDGSSNGTAGESVSAVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQDGGDQGGGNGLCLPDALPHRLVPGRASRPFPGGPHPHRVGRSRFSR 310
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|553178746|ref|XP_005852598.1| (hypothetical protein NGA_0726900, partial [Nannochloropsis gaditana CCMP526] >gi|422295936|gb|EKU23235.1| hypothetical protein NGA_0726900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 340.502 bits (872), Expect = 4.765e-116 Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0
Query: 103 MYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQD 265
MYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFH EPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQD
Sbjct: 1 MYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHAEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATSSSRASRDLGEGAAQD 163
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|813191717|ref|XP_012207741.1| (hypothetical protein SPRG_13375 [Saprolegnia parasitica CBS 223.65] >gi|641527262|gb|KDO21564.1| hypothetical protein SPRG_13375 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 145.591 bits (366), Expect = 4.457e-36 Identity = 91/224 (40.62%), Postives = 122/224 (54.46%), Query Frame = 0
Query: 31 RHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE---CSTQCLDDLCLVTQHYSEGSAWRAFSVEDS--VGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDAT 249
R D +R LP RR A + + T PL G+HY L +G PPQ +VIVDTGS A CA + CG H P + +SS+AR ++C E CS+ C D C ++Q Y+EGS W A V + VG G A T + + V F GCQTK TGLF+ Q ENGIMGLS+ ++++ +A R+ R FSLCF E +GG M +G D++
Sbjct: 27 RMDLKRDLPLRRRLDAANATTTAPFLKNQVPLGVGAGTHYAELYMGLPPQKASVIVDTGSHLTALPCASCPN--CGTHTDPPYDIAKSSTARFMQCDEFDGCSS-CEQDHCRISQSYAEGSMWSALLVNELCWVGPLDATGGSNATTTMAASGVRFPIGCQTKETGLFIGQKENGIMGLSQDNNTFMAYLVSANRVDRNLFSLCFAE---NGGQMVLGGADESV 244
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|669164490|ref|XP_008617807.1| (hypothetical protein SDRG_13493 [Saprolegnia diclina VS20] >gi|530730570|gb|EQC28812.1| hypothetical protein SDRG_13493 [Saprolegnia diclina VS20]) HSP 1 Score: 141.739 bits (356), Expect = 1.050e-34 Identity = 90/239 (37.66%), Postives = 126/239 (52.72%), Query Frame = 0
Query: 16 AVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE---CSTQCLDDLCLVTQHYSEGSAWRAFSVEDS--VGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDAT 249
A+LP + R +R LP RR + + + T PL G+HY L +G PPQ +VIVDTGS A CA + CG H P + +SS+AR ++C E CS+ C D C ++Q Y+EGS W A + + VG G A +++ V F GCQTK TGLF+ Q ENGIMGLS+ ++++ +A R+ R FSLCF E +GG M +G D++
Sbjct: 12 ALLPWVMSLDEGRVVRMGLKRALPLRRRLDSAANATTALFLKNEVPLGVGAGTHYAELYMGLPPQKASVIVDTGSHLTALPCASCPN--CGTHTDPPYDIAKSSTARFMQCDEFDGCSS-CEQDQCRISQSYAEGSMWSALLINELCWVGPLDASGESNATSSMAAAGVRFPIGCQTKETGLFIGQKENGIMGLSQDRNTFMAYLVSAKRVDRNLFSLCFAE---NGGQMVLGGADESV 244
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|585109531|gb|EWM27330.1| (Peptidase aspartic [Nannochloropsis gaditana]) HSP 1 Score: 143.665 bits (361), Expect = 1.183e-34 Identity = 84/187 (44.92%), Postives = 106/187 (56.68%), Query Frame = 0
Query: 60 FPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGEC--STQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNV-PPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVG 243
PL G+HY + +GTP Q +VI+DTGS W AF C GC M +H P F +S + L C EC S C D+ C ++ Y+EGS W A+ V D++ E + QAP ++PFVFGCQT TGLF QLENGIMGLS +V +R AG+I FSLCF E DGG M +G
Sbjct: 102 LPLHAGYGTHYAFVFVGTPAQRVSVILDTGSHWTAFPCT-GCQMCGDDHTDPVFDVLKSDTFHALDCSECKFSGHCKDNKCSISLAYAEGSRWDAYEVRDTLFLGGE--SPQAPVRGGQDLSMPFVFGCQTYETGLFRTQLENGIMGLSFQDLTIVPRLREAGKIDATVFSLCFTE---DGGSMRIG 282
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|676389575|ref|XP_009038066.1| (hypothetical protein AURANDRAFT_27859, partial [Aureococcus anophagefferens] >gi|323451574|gb|EGB07451.1| hypothetical protein AURANDRAFT_27859, partial [Aureococcus anophagefferens]) HSP 1 Score: 130.568 bits (327), Expect = 1.825e-33 Identity = 77/183 (42.08%), Postives = 108/183 (59.02%), Query Frame = 0
Query: 67 GSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGEC--STQCLDDLCLVTQHYSEGSAWRAFSVEDSVGF----HTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVG 243
G+HY + +GTPPQ +VIVDTGS AF C+ GC CG+H P+F ++SS+ R L C +C + +C+ C V+Q Y+EGS+W+A ++D+ TE +R + PFVFGCQT TGLF Q +GIMG+S + LV MR+A + +FSLCF + GG M +G
Sbjct: 4 GTHYAHVYVGTPPQRVSVIVDTGSHHTAFPCS-GCKS-CGKHTDPYFDPDKSSTLRRLGCSDCVAAARCVTKTCQVSQSYTEGSSWKAVQMKDAYYVGGTSLTEKASRDGSAWIA---TPFVFGCQTYETGLFRTQKADGIMGMSMHAQTLVPTMRSANALGHNSFSLCF---MHGGGTMALG 178
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|325183199|emb|CCA17657.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 139.428 bits (350), Expect = 3.178e-33 Identity = 86/229 (37.55%), Postives = 117/229 (51.09%), Query Frame = 0
Query: 23 RVPPAARRRHDRRRPLPWRRGQAALSQS--LTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE---CSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLD 246
R+P A+R + L + Q S L +D+ PL G+HY L IG PPQ +VI+DTGS AF C D CG H P F +S+S ++C C T C D+LC++ Q YSEGS W A ++D + R A + + F FGCQT+ TGLF+ Q+ENGIMGL G N+ + M A R+ F+LCF + GG +G +D
Sbjct: 2 RIPSASRNLEPLKIELKRKTRQLKNQTSPPLVYNDA----PLGVGLGTHYAELYIGIPPQRASVILDTGSGLTAFPCDKCVD--CGTHTDPKFDATKSTSINFVQCKYEEGCDT-CRDNLCVIHQRYSEGSMWEAVVMQDLIWVGNVDSDR-AEMIMRRYGIRFKFGCQTRETGLFITQVENGIMGLGIGRNNIATEMYKAKRVEEHKFALCFGQK---GGSFVIGGVD 219
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|1173935995|gb|OQR87033.1| (aspartyl protease family A01B [Achlya hypogyna]) HSP 1 Score: 137.502 bits (345), Expect = 3.987e-33 Identity = 85/226 (37.61%), Postives = 119/226 (52.65%), Query Frame = 0
Query: 31 RHDRRRPLPWRRGQAALSQSLTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE---CSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTN----VPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDAT 249
R + +R +P RR + SL PL G+HY L +G PPQ +VIVDTGS A C D CG H P + ++S++AR + C E CS +C ++ C ++Q Y+EGS W A V++ T +N + V F GCQTK TGLF+ Q ENGIMGLS+ ++++ AAG + R F+LCF + DGG M +G DD+
Sbjct: 29 RMELKRNVPLRRRLGNATFSLDA------VPLGVGAGTHYAELYMGLPPQKASVIVDTGSHLTALPCTSCVD--CGTHTDPAYDVSKSTTARFMSCSEFDGCS-KCDNNQCRISQSYAEGSMWSALLVDELCWVGPLDATGAVDSNATQRLQAYGVRFPIGCQTKETGLFIGQKENGIMGLSQDRNTFLAYLVAAGHVDRNLFTLCFAQ---DGGQMVLGGTDDSV 242
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|1173959842|gb|OQS06028.1| (aspartyl protease family A01B [Thraustotheca clavata]) HSP 1 Score: 134.035 bits (336), Expect = 7.487e-32 Identity = 79/189 (41.80%), Postives = 105/189 (55.56%), Query Frame = 0
Query: 61 PLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGE--CSTQCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDD 247
PL G+HY L +G PPQ +VIVDTGS A C+ D CG H P + ++S +AR ++C E T C ++ C V+Q Y+EGS W A V++ T A N V F GCQTK TGLF+ Q ENGIMGLS+ + +S++ A ++ AFSLCF E GG M +G +DD
Sbjct: 44 PLGVGEGTHYAELYLGQPPQKASVIVDTGSHLTALPCSTCLD--CGSHTDPPYDVSKSQTARFMRCSEFDACTACDNNQCRVSQSYAEGSMWSALLVDELCWIGPMDNT-NASFNGESFGVRFPIGCQTKETGLFIGQKENGIMGLSQSRNSFMSYLYQARKVKHNAFSLCFAE---SGGQMILGGVDD 226
BLAST of EWM21812.1 vs. NCBI_GenBank
Match: gi|953487136|emb|CEG49198.1| (Aspartyl protease [Plasmopara halstedii]) HSP 1 Score: 134.035 bits (336), Expect = 1.564e-31 Identity = 74/184 (40.22%), Postives = 107/184 (58.15%), Query Frame = 0
Query: 67 GSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPGCDMYCGEHVHPFFAYNESSSARILKCGECST--QCLDDLCLVTQHYSEGSAWRAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVF--GCQTKLTGLFVPQLENGIMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLD 246
G+HY + +G PPQ +VI+DTGS + A C+ + CG H F + S++A+ +KC E T C +D C+++Q Y EGS W+A VE+ V + A + T F++ GCQTK TGLF+ Q ENGIMGL R P +++++M AGR+ R F+LCF DGG + G +D
Sbjct: 99 GTHYAEIYLGIPPQRASVILDTGSHYTALPCSSCHE--CGTHTDGLFNVSRSTTAKYIKCHEYQTCRSCENDRCIISQSYVEGSMWQAEMVEELVWVGGYSSSNDAMEGLLKT-FGFLYPLGCQTKETGLFITQKENGIMGLGRHPSSILTYMVKAGRVSRNLFTLCF---TLDGGELVFGGVD 276 The following BLAST results are available for this feature:
BLAST of EWM21812.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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