rna8859, rna8859 (mRNA) Nannochloropsis gaditana

Overview
Namerna8859
Unique Namerna8859
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2086
Alignment locationKK037250.1:327673..330182 -

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Properties
Property NameValue
Productcyclin-like protein
Orig transcript idgnl|cribi|Naga_100051g13.8869.mrna
Orig protein idgnl|cribi|Naga_100051g13.8869
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:327673..330182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100051g13gene8589Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21830.1cds8829Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8859rna8859-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8859 ID=rna8859|Name=rna8859|organism=Nannochloropsis gaditana|type=mRNA|length=2086bp
TTACATTTTCCACCGCGCACGTAGGAGTGAGGAGACAGGACAAGGAAGGG
CGGAGGCTAAGTCGGGCGTCGAAGGTGTTATTTGTGTGGAACCAGGCAGT
CTCTGTCATTGGAGGCACAGCAACATCATATTCTCAACGCTGCTATCGGC
TCGCTGAGTCCTGGAGGCACATCTCCTGTTTCTTTTCTCCAATCCAGGAA
AGCAAGATCCATGGAATGCCTCTCGATCTCCTCCCCCTTGCTTGAAAATG
CCAGGAGCATTGCCGGGATTCTGCTCTCTTCCCATATATTCAAAGTAGTT
GCTGGGCTGCTCCTGAGCAGCTGGCTGCTATGCGAAATAGCTTTTTATTT
TTACTTGCGATACATCGTCCTACCCGAGCTCAATCGACTTACAACTCCTG
TGGAGGGTGCTCACACGCCCTGGGACGAATTTCACAAAATTATTGACGTG
GTATCGCAGCTTAAGGAGTCTTACGCCTTCGAGCGCTTCTTTTCAGGTTG
GTTCTTGGGCGCACCAATCAAAGATATCCGTCGCGGAAACGTACGAGAAA
TGCTGGCATGGGCCCTGTACAGCAAGGCTCAATCCACGCTAACGGTTCGA
CAAAAGGCTTGCGTCGAGGATGTCCTGTATTGGCTGAAGATGCGCTTCCA
GATCGATTGCCCAGAGGGGTACAATCCCCAGGTACGGCCCATGCTCCTTA
CCCTCGACAAGATCACGTACATGCATCGGCCGTTGGTCTTCTATGCCTCC
TTAACGGTAATACAGGTCTTGGGTCACAGTGTGCTGACTTTGCTGGGCTT
TCGACGGCACGAGGTGAACGGCATCGCCTATTGGTATCGGTCTCGGGTCA
GGGATGTGCGCCCCGGGGAGGAGGCGAGTCTGCCCATGGTCTTTTTCCAT
GGGATTTCGCCAGGGCTTAATTTATACTTGTTGGTAATTCACACGTTGTC
GCGGGGCCGCAAAATGGTGCTTATGGAGGTACCACACATCGCCATGTGCC
TGAACTTCAAAGCGAAGCGCCTGGGTGATATGGTCAAAACGGTCGAGATC
ATCGCGAAGCGGCATCGCATGCCTTATTTCTCGGTCGTCGGGCATTCATT
CGGAAGCTTGTGCGCGGCCTGGGTCTCCAAGCACCTGAAACACAACGTTC
GTCAGCTCGTGCTCTTGGACCCCGTGTCCCTCCTCCTTGGCCTCCCGGAC
GTCTGCTACAACTTCCTCCACAAGAAACCCAAGACCGTCATGGAGCACTT
GCTCCACTACGGGGGCTCAATGGAGATCACGATCCATCACACGCTACGCA
GGCAATTCTGGTGGTACGAAGGCCAGCTATTCTTGGATGAAATCAAGTGT
CCCGTGTACGTTGGCTTGAGCGGGAACGACGAGATCGTGCCTTCGGCCAT
CCTCAAACTCTACATCGAAGATCACCTGGCCAAGACACACGCCGAGGAGC
ATCATCGGCATCTTATCCGAGCGCGACGGAGCAGCAGCCGTGGGGTTGGG
AACGGAAGCAGCCACAGCCAGCCGCACAACCAGGATTCCACCTGTAAGAC
CTTCGAAAAGGAGACAGCTTCGGTCAGCAGTGGCAAGGGGCAAGTGGCTG
GCCCTGAACTGGTTTCAGGCAGCGGGGGGCTGTCAACCGCGCCCTGTCAC
TTGAACCATACGCCAGGAGACGAACGCGGGTGCATTTTGCAGAGAATACA
GTACGTGTACTGGGAAGGGTGGTCTCACGGGGAGATACTTTTCCGTTTTC
CACAGTTGAAAGCTCTAGATATGGCGCTACGAGAGCAAGAGAAGCTTTTT
CGCTCCCCCGATGTGAGCGCAGCCATAGATATGTCGCGCAAAGGAGGGGC
ACATCGACAGAGCAGCCTCGATCACTCTCGAGCGGTAATGAGCAGCCATA
GGGACACGAGAAAATTGAGCACGAGTACTGTCGTGGGGGTAAATGAGAAT
GGGGGCGCGGGACTTAGTAGCAGCATAAAATTCAAATCTTAGCACGTAAA
TGACGACTTCCTCGATGAAATGGCGCGTGTCCCATTCGTCCTGAAGGTAA
AACATTGAGAAATAATTCAAATTGTAGAGGTAATCA
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protein sequence of rna8859

>rna8859-protein ID=rna8859-protein|Name=rna8859|organism=Nannochloropsis gaditana|type=polypeptide|length=394bp
MEEISGSPDRRPTDEPVALPSSASQSSDSEVNAGLEHHLSDATSFPFSSS
LSSSTLPVGIIDIDETQGSSQHPRSHLLPHQVGKASHKQSNNVIVPRSSN
LALTDGTPQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDM
RALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCAC
LFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVT
AYNFLSRFTLAAGSGPRETALVYYFSELSLLHYEFLGFSPSIRAAAALYL
ARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRR
AHAGVEYSPYEALKLKYGAPALLHVGDIACVEEKDLGATILNLN
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mRNA from alignment at KK037250.1:327673..330182-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8859 ID=rna8859|Name=rna8859|organism=Nannochloropsis gaditana|type=mRNA|length=2510bp|location=Sequence derived from alignment at KK037250.1:327673..330182- (Nannochloropsis gaditana)
AACGACACTCCCGCGCACTTCTAACTTTTCCAATTTACGTGAAAATGGAG
GGAATATGGAAGTTCTGTGAGAAATATTTTGTATTTCGTCCATGCGTCGT
ACAAACATACACGGGCACAATTATGTTTCGAGTCAAACTAAGTTGTAGCA
AGCGCTTGCTCGAACTCTTCTTTACATCGCCAAGTCTCTTGCACGGTACT
AGTCCGCGCGGATCGTCACATCGAGTCGTTCTGTAAACTTTCCCATCCAC
AATTTTTGATACCAAAAAATAACTCACACCTTTCTATTGACGTCTGATAA
TTTACACAGGTTACCCCCGTCCGCCGCAGCCCGTCCGCCGCAGCCCGTCC
GCCGCAGCCCACTCTCCGCAGTCGCGCAGCACCTTCCCGCGTCCGAGTTT
CGACCTATTCCACCATAACGACACGAAGATGGTTCATTCAAAGCGCAAAG
CTCTCGAAGATATCACTGCTGTTGCCCTTTCGGGCTCACAGCCTTTCCGC
GCCGCTTATGACACAGGCGGAAAACATAAGGTACGTGTACCCTGTGGCTT
ATCAGGGGACCGTTTTCCTCCAGCTTCTTCATCAAAATTTCTCCTTACCT
TCCTGTATCCTCAATTTTACACATTCATATTTAGCGTGCGTGCATCGACA
CGGTTAATCAAACATCAAAACGTCGAGTTCCAGACGCTCCTTGCCGAGTC
ACGCGTCGCTCTTCCGCTCTTGCTGCCTTCTCTTTGACCACTGACGGACC
GGCTCAGGATGGCAAAGCCACTTTCCGCCGCCTGTATTCCACCCGGTCCT
GTCCCAATGTCGAGATCAACTGTCCCGTCCCGGCCTCCTCAAAAGTGAAG
GATGATAAGGATAGCGACGCAGACCTCCACCTAGCATGCAAGGAGGCCTT
AGCCATGGAAGAAATCTCCGGATCTCCAGATCGACGTCCGACCGACGAGC
CCGTCGCGCTGCCTTCGTCAGCATCCCAATCTTCAGATAGTGAAGTCAAT
GCGGGCCTCGAACACCATCTCAGCGACGCCACCTCCTTTCCATTTTCCTC
CTCTCTTTCCTCCTCGACTTTGCCTGTGGGCATCATCGACATCGACGAGA
CACAGGGCTCCAGCCAGCACCCTCGCTCGCACCTCTTACCCCACCAAGTG
GGGAAAGCCAGCCACAAACAAAGCAACAATGTGATCGTTCCCCGTTCTTC
CAATTTGGCGTTGACGGACGGGACTCCCCAACGGCTGGCGTCCTACAGCC
GGGATTATTTCGCCTACCTCCGGGAGCGCGAACGCGAGCAACAAGACCGC
CCTCTGCCCGATTACATGTCCCGCATCCAAGGCGGAGCATTGACTCAGGA
TATGCGGGCGTTGCTGGTGGATTGGCTGGTCACCGTTTGCGAAGAATGCG
AGCTGATGCCCTCCACTCTGTACCACTGCGTGGAGCTCATCGACCGGGCC
TTGAGCAAATTGCAGGTACCCAAGGAGCAGCTCCAGTGCATGGGATGCGC
ATGCCTCTTCATCGCATGTAAATTCGAGGAGACCACGGTTCCGTCCCTGG
AGGAATTTACCTACATGGCGGCCGAGTCCTTCAGCAAGAAGCAACTCACG
GACTTGGAACTGCGGGTGGTCGAGGCGCTCTCCTTCCGGCTCTCTACCGT
TACGGCCTACAATTTTCTCTCGCGATTCACACTGGCCGCCGGTTCTGGGC
CACGCGAGACAGCCCTCGTCTACTATTTTTCGGAGCTGTCCCTTCTGCAC
TACGAATTTTTAGGCTTTTCTCCTTCTATCCGCGCGGCCGCTGCGTTGTA
CTTGGCCAGACAGACTCTCGCGGTTTCAAACACGGACTCTGCTCGTCGGG
CCGCAGAGGAAAGAAACATCTGGACCCCGACGATTGCTTTCTACACCGGC
TACTCTCCCGCCACAACTCTGCCCCTACAAGAATGCGTTCGTCTGCTCCG
ACGAGCGCATGCAGGGGTAGAGTATTCGCCTTACGAGGCTCTAAAACTGA
AGTATGGGGCGCCGGCCTTGCTCCACGTCGGTGACATTGCCTGTGTGGAG
GAAAAAGATCTGGGAGCAACGATTCTCAATCTAAATTAAATATGATTTAC
GACTGTATTTAAACAAAGTTAGGGGGATGGAATTGAAAGTTATCTATCGG
CGCCAGGTAGGAGGAACGCAACAAAGTAGAACAAAAGTCCAATAGTTTAG
GATAGAGGCAAATCACACCTGTAAATTTATGAAATGATAATCGAAATGAT
AGATCTTCAGCTTTTCAAAGGAATAAGGTGGAAGAAAAGCGCATAGGGAT
GACTATCGCGTTGCCAAGGACACCTGTCCACCGCGTGTGCTACCCGTCGC
TTTCGCCATGAAGGTGAAAGCCCGTCGTTGGTGTCCGTCTCGCGTGTAGA
ACAAAATTTTGCCATGGTAGACTCGTTTCAAAGAGCGAGCTAGACAAGCG
AGTTTGCCAGAAAGCAAAGTAAGGTAAAAGGAACAAAAACTGCAAATCAG
TGATTACCTC
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Coding sequence (CDS) from alignment at KK037250.1:327673..330182-

>rna8859 ID=rna8859|Name=rna8859|organism=Nannochloropsis gaditana|type=CDS|length=1185bp|location=Sequence derived from alignment at KK037250.1:327673..330182- (Nannochloropsis gaditana)
ATGGAAGAAATCTCCGGATCTCCAGATCGACGTCCGACCGACGAGCCCGT
CGCGCTGCCTTCGTCAGCATCCCAATCTTCAGATAGTGAAGTCAATGCGG
GCCTCGAACACCATCTCAGCGACGCCACCTCCTTTCCATTTTCCTCCTCT
CTTTCCTCCTCGACTTTGCCTGTGGGCATCATCGACATCGACGAGACACA
GGGCTCCAGCCAGCACCCTCGCTCGCACCTCTTACCCCACCAAGTGGGGA
AAGCCAGCCACAAACAAAGCAACAATGTGATCGTTCCCCGTTCTTCCAAT
TTGGCGTTGACGGACGGGACTCCCCAACGGCTGGCGTCCTACAGCCGGGA
TTATTTCGCCTACCTCCGGGAGCGCGAACGCGAGCAACAAGACCGCCCTC
TGCCCGATTACATGTCCCGCATCCAAGGCGGAGCATTGACTCAGGATATG
CGGGCGTTGCTGGTGGATTGGCTGGTCACCGTTTGCGAAGAATGCGAGCT
GATGCCCTCCACTCTGTACCACTGCGTGGAGCTCATCGACCGGGCCTTGA
GCAAATTGCAGGTACCCAAGGAGCAGCTCCAGTGCATGGGATGCGCATGC
CTCTTCATCGCATGTAAATTCGAGGAGACCACGGTTCCGTCCCTGGAGGA
ATTTACCTACATGGCGGCCGAGTCCTTCAGCAAGAAGCAACTCACGGACT
TGGAACTGCGGGTGGTCGAGGCGCTCTCCTTCCGGCTCTCTACCGTTACG
GCCTACAATTTTCTCTCGCGATTCACACTGGCCGCCGGTTCTGGGCCACG
CGAGACAGCCCTCGTCTACTATTTTTCGGAGCTGTCCCTTCTGCACTACG
AATTTTTAGGCTTTTCTCCTTCTATCCGCGCGGCCGCTGCGTTGTACTTG
GCCAGACAGACTCTCGCGGTTTCAAACACGGACTCTGCTCGTCGGGCCGC
AGAGGAAAGAAACATCTGGACCCCGACGATTGCTTTCTACACCGGCTACT
CTCCCGCCACAACTCTGCCCCTACAAGAATGCGTTCGTCTGCTCCGACGA
GCGCATGCAGGGGTAGAGTATTCGCCTTACGAGGCTCTAAAACTGAAGTA
TGGGGCGCCGGCCTTGCTCCACGTCGGTGACATTGCCTGTGTGGAGGAAA
AAGATCTGGGAGCAACGATTCTCAATCTAAATTAA
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Synonyms
Publications