EWM21830.1, cds8829 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|585102172|gb|EWM21830.1| (cyclin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0
Query: 1 MEEISGSPDRRPTDEPVALPSSASQSSDSEVNAGLEHHLSDATSFPFSSSLSSSTLPVGIIDIDETQGSSQHPRSHLLPHQVGKASHKQSNNVIVPRSSNLALTDGTPQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPALLHVGDIACVEEKDLGATILNLN 394
MEEISGSPDRRPTDEPVALPSSASQSSDSEVNAGLEHHLSDATSFPFSSSLSSSTLPVGIIDIDETQGSSQHPRSHLLPHQVGKASHKQSNNVIVPRSSNLALTDGTPQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPALLHVGDIACVEEKDLGATILNLN
Sbjct: 1 MEEISGSPDRRPTDEPVALPSSASQSSDSEVNAGLEHHLSDATSFPFSSSLSSSTLPVGIIDIDETQGSSQHPRSHLLPHQVGKASHKQSNNVIVPRSSNLALTDGTPQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPALLHVGDIACVEEKDLGATILNLN 394
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|1173934894|gb|OQR86098.1| (cyclin-like protein [Achlya hypogyna]) HSP 1 Score: 182.57 bits (462), Expect = 5.236e-50 Identity = 94/242 (38.84%), Postives = 154/242 (63.64%), Query Frame = 0
Query: 115 SRDYFAYLREREREQQDRPLPDYMSRIQGGA--LTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALVYYFSELSLLHYEFL-GFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHA 353
+R+ AY R+ E++ R + +Y IQ G+ LT MR +L+DWLV V EE ++ P L+ + L+DR L+ + +P+ +LQ MGCAC+ ACK+EE P++E+F Y++ +++ +++ ++E +V+EAL FR+S+ Y+FL RF LA + + +Y +EL+LL Y + ++PS+ AAAA+YL+R V+N E+N+WTPT+ +YT Y+ L +CV+LL +AHA
Sbjct: 138 AREIDAY--HRKHEEKYRLVTNY---IQEGSRELTARMRMILMDWLVEVGEEYKISPKALHLAISLVDRCLAAMTIPRGELQLMGCACMMTACKYEEVQCPTIEDFVYISDHTYTGERMLEMESKVLEALEFRISSTHVYHFLERFVLAGCTTDVQNHFAHYITELALLDYVIVQSYAPSVIAAAAVYLSR---VVTN---------EQNVWTPTLHYYTKYNAVQVL---DCVKLLHKAHA 359
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|953485872|emb|CEG50050.1| (cyclin-like protein [Plasmopara halstedii]) HSP 1 Score: 179.489 bits (454), Expect = 1.238e-47 Identity = 88/229 (38.43%), Postives = 138/229 (60.26%), Query Frame = 0
Query: 125 REREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHA 353
R+ E + P DY+ +Q + + MR +L+DWLV VCEE EL T + V L+DR L K+++ ++Q Q +GCAC+ IA KFEE P++EEF Y++ ++++ ++ ++E++V+ AL +R+++ T Y F+ R+T A + ++ +LV Y + +LL + F PSI A+A+YLAR T VS+ WTPT+ T Y+P L QECV L R HA
Sbjct: 257 RKHEIKYLPEADYIGTVQMD-INEKMRTILIDWLVEVCEEYELDSQTFHKAVNLVDRCLKKIKINRKQFQLLGCACMMIAAKFEEVFGPNVEEFVYISDQTYTAVEMLNMEVQVLNALQYRVASTTCYGFIHRYTEAGCTTDKQRSLVLYLCDFALLFLHMVRFKPSILVASAVYLARLTTGVSDP------------WTPTLHHATKYNP---LDFQECVEELHRLHA 469
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|470113056|ref|XP_004292743.1| (PREDICTED: cyclin-A3-2-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 175.252 bits (443), Expect = 1.308e-47 Identity = 98/285 (34.39%), Postives = 152/285 (53.33%), Query Frame = 0
Query: 102 ALTDGTPQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETA------LVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPALLHVGDIAC 380
A D PQ Y+ D +AYLR E E + RPLPDYM +IQ ++ +MR +LVDW V V +E EL+P TL+ V +D+ LS VP+ +LQ +G A +FIA K+EE P+++E + + +F+K+Q+ +E ++ +L F + FL +F A +T L++Y ++LSL+ Y+ + F PS+ AA+A++LAR + S N W P + YTGY A L+ECV ++ + G A++ KY V + C
Sbjct: 78 ARDDEDPQLCGPYAADIYAYLRRMEVEPKRRPLPDYMEKIQKDSINANMRGVLVDWFVEVADEYELLPETLHLAVSYVDKYLSMNVVPRSELQLVGVASIFIASKYEEIDPPNVDELSDITENTFTKQQVIKMEANILLSLKFEMGNPNVRTFLRKFIDLAQESYYKTPSVQFEYLIHYLTDLSLVDYKLVKFLPSMIAASAVFLARVIITRSKV----------NAWCPALQEYTGYKAAD---LRECVLIIHDLYLGRRGGSLVAVREKYKQTKFKCVAKMHC 349
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|1109250302|ref|XP_019199920.1| (PREDICTED: putative cyclin-A3-1 [Ipomoea nil] >gi|1109250484|ref|XP_019200013.1| PREDICTED: putative cyclin-A3-1 [Ipomoea nil]) HSP 1 Score: 174.481 bits (441), Expect = 2.686e-47 Identity = 98/270 (36.30%), Postives = 152/270 (56.30%), Query Frame = 0
Query: 108 PQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALV-----YYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPAL 372
PQ ++Y D + YLR+ E +++ RPL DY+ ++Q +T +MR +LVDWLV V EE +L+ TLY ++ IDR LSK +P+++LQ +G + + IA K+EE + P++E+F Y+ +++K+++ +E V+ AL F L T FL +FT A + L YY +ELSLL Y + F PS+ AAA ++L+R TL E + W+ ++ YTGY PA L+ECV ++ AL+ KY P
Sbjct: 91 PQMCSAYVSDIYEYLRQMEAQEKRRPLCDYLEKVQKD-ITANMRGILVDWLVEVAEEYKLLSDTLYLTIDYIDRFLSKNPIPRQKLQLLGVSSMLIASKYEEISPPNVEDFRYITDNTYTKQEVVKMEGDVLNALKFELGNPTIKTFLGKFTQIAQQDYKSENLQLEFLGYYLAELSLLDYSCIKFLPSMVAAAVVFLSRFTL-----------KPEVHPWSQSLQDYTGYKPAD---LKECVSVIHDLQLSRRRGSLVALREKYKQPKF 345
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|1179533851|ref|XP_020688019.1| (cyclin-A3-1-like [Dendrobium catenatum]) HSP 1 Score: 170.244 bits (430), Expect = 7.752e-46 Identity = 92/269 (34.20%), Postives = 149/269 (55.39%), Query Frame = 0
Query: 99 SNLALTDGTPQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKY 367
SN + PQ Y+ D AYLR E EQ+ RP+ +YM ++Q ++ +MR +LVDWLV V EE +L+P TLY V +DR LS V K++LQ +G + L IA K+EE P++E+F + +++KK++ ++E +++ L+F + T +FL F A + L Y +ELSLL Y+ + F PS+ AA+ L+L R ++ + R W + +TGYS + L++C+ L +++S A++ KY
Sbjct: 69 SNNDNGEDDPQLCVPYAADILAYLRFMEAEQKRRPMGNYMEKVQKNNISANMRGILVDWLVEVAEEYKLVPDTLYLAVSYVDRFLSCYTVDKQKLQLLGISSLLIASKYEEIEPPNVEDFCDITDNTYTKKEVVEMEANILKFLNFEMGNPTVKSFLRNFIKAGAEDKKSDLLANYLAELSLLDYDCIRFLPSMIAASILFLVRFSMNPN-----------RQPWNSKLQEHTGYSSSD---LKDCIFALHNMQMNLKFSSLTAIREKY 323
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|1109250486|ref|XP_019200014.1| (PREDICTED: putative cyclin-A3-1 [Ipomoea nil]) HSP 1 Score: 170.244 bits (430), Expect = 1.153e-45 Identity = 100/285 (35.09%), Postives = 153/285 (53.68%), Query Frame = 0
Query: 99 SNLALTDGT------PQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALV-----YYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPAL 372
+N+ DG PQ ++Y D + YLR+ E +++ RPL DY+ ++Q +T +MR +LVDWLV V EE +L+ TLY ++ IDR LSK + +++LQ +G + + IA K+EE + P++E+F Y+ +++K+++ +E V+ AL F L T FL RFT A + L YY +ELSLL Y + F PS+ AAA ++L+R TL E + W + YTGY PA +ECV ++ AL+ KY P
Sbjct: 76 TNVVEEDGIDSKSDDPQMCSAYVSDIYEYLRQMEAQEKRRPLCDYLEKVQKD-ITANMRGILVDWLVEVAEEYKLLSDTLYLTIDYIDRFLSKNLISRQKLQLLGVSSMLIASKYEEISPPNVEDFRYITDNTYTKQEVVKMEGDVLNALKFELGNPTIKTFLGRFTQIAQQDYKSENLQLEFLDYYLAELSLLDYSCIKFLPSMVAAAVVFLSRFTL-----------KPEVHPWNRALQDYTGYKPAD---FKECVSVIHDLQLSRRRGSLVALREKYKQPKF 345
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|1175879986|ref|XP_020593600.1| (cyclin-A3-1-like [Phalaenopsis equestris]) HSP 1 Score: 169.859 bits (429), Expect = 1.195e-45 Identity = 96/280 (34.29%), Postives = 151/280 (53.93%), Query Frame = 0
Query: 99 SNLALTDGTPQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETALVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNI--WTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPALLHVG 376
SN+A + PQ Y+ D AYLR E E++ RP+ +YM ++Q ++ +MR +LVDWLV V EE +L+ TLY V +DR LS V K++LQ +G + + IA K+EE P +++F Y+ +++KK+L +E ++++L F + TA FL F A L + +ELSLL Y+ + F PS+ AA+ ++LAR T+ N+ W+ + YTGYS + L++CV L ++S A++ KY P V
Sbjct: 66 SNIANEEDDPQLCLPYAADVLAYLRFLEGEERRRPMRNYMEKVQKKVISANMRGILVDWLVEVAEEYKLLSDTLYLAVSYVDRFLSCNAVDKQKLQLLGVSSVLIASKYEEIEPPKVKDFCYITDNTYTKKELVQMEANILKSLHFEMGNPTAKTFLRNFINAGVENKNSELLANFLAELSLLDYDCIRFLPSLIAASVVFLARFTM-------------NPNVHPWSSKLQQYTGYSSSD---LKDCVLALHNMQMNRKFSSLTAIREKYKQPKFKAVS 329
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|657972387|ref|XP_008377992.1| (PREDICTED: cyclin-A3-2-like [Malus domestica] >gi|658043482|ref|XP_008357378.1| PREDICTED: cyclin-A3-2-like [Malus domestica]) HSP 1 Score: 169.859 bits (429), Expect = 1.384e-45 Identity = 101/281 (35.94%), Postives = 152/281 (54.09%), Query Frame = 0
Query: 108 PQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGSGPRETA-----LVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPALLHVGDIACVEE 383
PQ Y+ D +AYLR E E + RP+PDYM ++Q A +MRA+LVDWLV V EE +L+P TLY + IDR LS V K++LQ +G + +FIA K+EE P+++E + ++ K+++ +E ++++L F + T FL +FT A + LV Y +ELSLL Y+ + F PS+ AA+A++LAR ++ T + + W P + YTGY A L+ECV + G ++ KY P V I C +E
Sbjct: 85 PQLCGPYASDIYAYLRRMEAEPRRRPMPDYMEKVQKDA-NANMRAVLVDWLVEVSEEYKLLPETLYLSISHIDRFLSMNVVHKQKLQLLGVSSIFIASKYEEIDPPNVDELCDITENTYKKEEVIKMEADILKSLKFEMGNPTTRTFLRKFTDVAQXSYKTPIVQLEFLVAYLAELSLLDYKLVKFLPSLVAASAVFLAR---FMTQTKT--------HPWCPELQQYTGYKAAD---LKECVLAIHDMCLGRRARNLNVIQEKYKQPKFKQVAHIPCPQE 350
BLAST of EWM21830.1 vs. NCBI_GenBank
Match: gi|1098826843|ref|XP_018819830.1| (PREDICTED: putative cyclin-A3-1 [Juglans regia]) HSP 1 Score: 169.474 bits (428), Expect = 2.496e-45 Identity = 95/276 (34.42%), Postives = 150/276 (54.35%), Query Frame = 0
Query: 108 PQRLASYSRDYFAYLREREREQQDRPLPDYMSRIQGGALTQDMRALLVDWLVTVCEECELMPSTLYHCVELIDRALSKLQVPKEQLQCMGCACLFIACKFEETTVPSLEEFTYMAAESFSKKQLTDLELRVVEALSFRLSTVTAYNFLSRFTLAAGS-----GPRETALVYYFSELSLLHYEFLGFSPSIRAAAALYLARQTLAVSNTDSARRAAEERNIWTPTIAFYTGYSPATTLPLQECVRLLRRAHAGVEYSPYEALKLKYGAPALLHVGDI 378
PQ +Y+ D + YLR+ E E + RPLP+Y+ +Q +T +MR +LVDWLV V EE +L+P TLY + IDR LS + +++LQ +G + + IA K+EE T P ++EF + +FSK ++ +E +++ L F + T FL F A + L YY +ELSLL Y + FSPS+ AA+ +++AR + + + W+P + YTGY P L+EC+ L+R H + +A++ KY +VG +
Sbjct: 94 PQLCVAYASDIYEYLRQMEMESKRRPLPNYLEEVQKD-VTANMRGILVDWLVDVAEEYKLLPDTLYLSISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEITPPKVDEFCSITDNTFSKAEVVKMEADILKLLMFEMGNPTIKTFLRIFNSVAQEYYKTPNSKLEFLGYYLAELSLLDYNCVKFSPSLVAASVIFIARFII-----------QPKMHPWSPKLQEYTGYKPVD---LKECIHLIRDLHLRKKGGSLQAIRDKYKQHKFKYVGSL 354 The following BLAST results are available for this feature:
BLAST of EWM21830.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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