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Properties
| Property Name | Value |
|---|
| Product | snf7 family protein |
| Orig transcript id | gnl|cribi|Naga_100051g11.8885.mrna |
| Orig protein id | gnl|cribi|Naga_100051g11.8885 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:323906..324832 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8857 ID=rna8857|Name=rna8857|organism=Nannochloropsis gaditana|type=mRNA|length=5324bp
TAAACATGTAGATTTTTTGCTGAACCATTTGATCATGATTATGTATGAAT
TTTAATCTGCCTTATGCTTTTGATTTTCTGTCAACTCTTTTCCGCTGGCA
AGGGATCTATTATAATTCCTTTTAAACTGGTGTGAGCTTTGCTCTGCGTA
TATGGGCCAAATATTTACTTGCCACACCTTTGGCCTCAAGGCCCTCTATT
AAGCGGCCTCGAATACCCTCAAGAGTTGCTAGCTCTTCTTCAGCCTTCAT
TTTTAGCTTGCGCCCTTCTTCAAATCTCCTGGCTCGTTCTGCTCGCCGTC
GACTTTCGGCCTCCTGAACCTGATGTTTCAAGGCTTCGAGGTGACTCTTG
TTTAGGCTTGCTTTTTTGGCTTGCTCGGCTAATTCCTGGTTTTTAATCTT
ATCTTCGTAGCTATCATTTACCTCGGTCTCCAATCTTTCTGCGAACGCAT
CTTCTTCGGCTCGCATCTTTTTGGCCTGGGCCTGACGGAGCAGTTCCTTT
TTCAGAGCTAAGGTCTCTTGCTTGCGACGCAAGGCATTCTCCTGCTCCAG
ACGGCAAGTGGCAGCTTCTTTCATTTCGGCGGCACGAAGAAGACGCCTCT
CTTCCAACCTCGCTTTATCGCTTCGTCCCTTTTCTTGTTGAAACAAGATT
TGCATCTGCCACATTTTTTTGGCATGGACACGGGCTGCTTTCTCTTTTTC
TCGGGCTTCCAGTTCAGCATCTTTGAGTTTTTGATACCGAAAAAGCTCTG
CCATTTCCTCTTTTTCTCGTTTTAAGGCAGCAGTCCGTGCTTCAATCGCT
TCGGCGTTTGCCCGTAGAATGTCCTCTCGGAGATTTGCCATTTGTGTCTT
TTTCTCACGCTGAATGGTTGCGTCTTGATCTTCATATGATTGAAACTGAG
CGAGCAACGCTAAACCTTCCTCCTCACGTTCCTTCCTTTCTATTTTTCTT
TTTTCTTCAATAGCTTGCATTTGAGCTGCCAAGGCCTCGCGTGCTTCTCG
TTTGGCCGAGGCAAGCTTTTCGGCCTCAGCGTAAGCGCCATCGAGTTCTA
ATTGTCGACTCTCCGCCACGAGACAGTCATTTTTAGACTGATTTTTTTTG
CTTTTTTCCGTAGCCATCCTTTTATTTTCCATCTGCCGGTCACGCAAAGT
AAAAGCCTCCGCCTGCGCCGCCAAGGCCTTTAGGTGTTTGACCACGTCCA
ATTCTTCTTCGCGAATCTTTTTTAACCGGGCCTGAGATGCACTTAGAGTC
AAATTACAGTTTCCATTATCATCTTTGGCTTCGCATTGATCCGCCAAAGC
AGCAAGCGCAAGCATTTTATTTTTTCGTTCATCCGCACCAGATTGTTTCT
CTTTCGAGTGCCGGTTGCCGAAGACGGATTTCAAAAGTCCTCCATCAGGT
TTTCCACTTGCACGCTTTTTCATTTTTTCTAATTGAGAGGCTGTCAATAT
AATCGGACTGGTTGAAGCCCCCTGGTTACTATGGCTGCAAGGATTGTTTT
CCCGATTGCGGTTCACTCCGAAAAGTGTGGGGTCTACAGGCTGCGCGAGC
GGGGCCTTGGAGCGATAAATTGCCTGCGGCATAATTTCTTGAAAAATTAT
AAACAGTGTGCACATTGTCGGCGTGAGTCGTTCGCGCGTGGGAATTTTGT
AGGAAAAGAGCACACGGGAAATGGAGGCTCGTAACGGTTTGCGGCACCCG
TTACCGTTAGCGAACAATTTGAAGGCTGAGGCGCGAAGCACGCCGCTTAG
GGTTCAAACTTGCAAAGGTCATGCGCGATACCTGCAAGAATCGTACAGGC
CCATGATGCCAAAAAGTTAAACGGGCTACAAAGCGTTGTTTTCCACGAGG
TTCAAACCCTCGGATGCATTTTGGCACATCGGCATATTTCTTTCCTCCAC
TACGTGTGAGAACTATTAACTTCATTCCATGGCTTCCCACAGCTTTTCTT
GAAGGGAAACATCAAGTCTATGCCATGTGGATGTACAATTAGACTTTCCT
TGTGAGACCATTAATCCGGTTGATGGAGTCAGTTTTGACCCCATCCCAGC
GGCCGTCACTTCCTCTCCGCGCCCCCCAGCCGCAAGCTGTTGATCATCGC
TTCGGAGACCAGCAAGAGCTCCCTACAGTGTTCAAAGTCCTACACCTACT
ACGGCATGGTATCGCGGTACACAACCAACCAAATGGACAGGACTTGCCGC
CCGCTTCTCTTTTGGATGCTTGCCTTACAGCACAAGGTGTGGCACAGGCT
CATGCCGCCAGGCATACGATTCAGGCTCTGCAGCCGCAATTTGTCATCAC
ATCCCCCTTAACCCGTGCGCTACAAACGACAACGATCATCATGAGCCCGG
AAAATGCGGGAGTGGGAAATGAGGACAACAATAGAACCGAAGGAAAGTCC
ACGCGTATAGTGGCCGTCGAACTTGTCCGGGAGGCCTACGGTGTCCTTCT
TCCTGACAAGCGCCGGAATGCCACCGAACTGCAGGCTGCCTTCCGTCCCA
CCGTTGACTTCTCGCTGCTGTCGGAGGAAGATCAGCTCTGGACTGCAAGC
CAGCGAGAGAGTCTGGAGTCGGTGCGTGGTCGCGCTCGGAAGTTTTTGCA
CGAGTTGCTGCCGCGTCCGGAGCGCCATGTCCTCCTCGTCTCGCACGGCG
TCTTCCTGCAATGCCTTCTACAGGAGACATTGCTACTCGATGATCCTTCT
AATTCTGAGTGGAACGAGGGGCAACAAATCATGAATTGTGAGCTCTACAC
CGTCATTTTCGTCGCAGTAGATCCACTTTGCACTGGAGGCTCCAACTTCT
CCTCCCCTCCCTCCGCCTCCCTCCCTGGCCAAGCTTACTCTCCCTCTGCT
CCTGCAGACCACAACGAGCCAAACTTATCAGGACAAAGGAATCCGCCCCT
GTTGCCCATGCTAGCACCCGGGGGTGGAAAAGACCGACTCGTACGCCGTT
TGCTCTTGAGTCCGGGGGTGCACGACATGTTGGTGGGCGCAGATTTGGGC
CCCTCTTTTATGGATAACGTGGTCGGCTGGCTTGCCGAGCTTTTCCTTGC
CTACACACATGGACAGTACCAAGTTCCTGTCCCTGCTTTTACTCGGCTCA
TGGGCCTGTGTGGCGTCGAAGAGGCTTTTGTGTGTGAACGATATTTTGTC
GCCTTCGCGTCCAGACGGCGTCCCCAGGCGGAATGGCGGGCACCAGCAAG
GCATGTCACCTGCACAAATGTACCGCAGCACCAGAATGCCATGGCAGAGG
GGAGAGCCATCGGTGTGCCAAGCACGTTAACATTCGAGGACTTCCTCGTC
GGGCTCGTGGCCATGGAACCTGGGACGGCCAACACAGGGCAGTGGCGCCG
TCTTCGGGCGGAATACATCTTTCGCGCCTATGACCTGAACGACGACGGGG
ATTTGGCCTTCGAAGACTTCAAGCTGGTGGTCGAAGACATGGCTCGTTTG
CACCAGGGCAAGGACAGCGCTCCGGGCTGGAGGTGCGACCCACAGGTGTT
GGAGAAAGAGGCGAGGAAATGGCACAAAGGAGGGCGTTGCTCACTGGTGG
ACTTCGTCTCTGCAGTCGAGACCATGAAGTTCCAGGGCACCGGCGTTCTT
TTTCGCACCCCTCAGTCGGTGATCCATGTCGATAAAGCGCGCCGACGGCT
GCTTTTGGATGGATCCCGTACCCCTTCCTCTGCCTCCCCCTCGTCTTCAG
GCCCCTCCTCCGGTGGGTGTCGCGACGGAGCGAGGACCTCCACAAGCTGC
AGTACCGGTAAAGAGGAGGACAGCGATGGCCTTTGCGCACAGGTCGGCCA
AGCGTCGTCGTCTGTGGTGAAGGTCAATTCTCGTCAAATTTGTTTCGACG
TCAGCAAGCAGCGGTACTCCATGTCTCCTCATGAGAAGACCAACCGCAAA
CTTGTCCGGATACACGAGGATCATGCGCCCTTATCCCATCAGGAAGGAAT
AAGGGCAAGCGGAGGGAGGGAGGGCGACGAGAGTAGTTGTGATGAAGTGG
ATAGGCAGCTGGCACGCACTGGGATGAACTCGACTTACGACTCACACAGA
AATGGAGAGCAATATGAAAAAGATTTCAGGACCATGAGTGCCGGGCAAGA
AACAGCGCATCGAATCATACGCTTGCTTCTAGACTGGGATCCTAATCGGC
AGGAAGCTCTGCCTGAACGTGGCGTCTTCGAGGCTTTGAAGGGCTTGAGC
GATCTGGAGCCGCTATTTGAAGAGTTGCAATCCCTCTTGGCGACCGAGCC
GACGGTGCTGGAAGTTCGAACGCCCACGCGAATATTTGGCGACATTCATG
GGCAGCTGAATGATTTATTGCGGTTGTTCAAAGCGTACGGTCGCCCCGAT
CGCTTTGGAGATATCAACCTTGTTGATTACATTTTCAATGGTGACTTCGT
CGATCGCGGGCCGTGCTCTTGCGACGTTGTTCTGCTCCTTTTTGCCATCA
AAGTCGCTTACCCGCGGCGTGTGTATCTTATACGGGGAAACCACGAAAGC
CGCGCTGTCAATGCGCTCTTCGGATTCAAAACAGAGTGTGTCCGTCGGCT
GGGCGAGCAGGCAGGGGTCTTGCTGTGGGAGATGTGCAACAGTCTCTTCG
ACGTCCTGCCTTTGGCCGCCTGCGTAGAGGGGCGCATTCTGGTCCTTCAC
GGGGGCCTAGGCGCCAGCCTGAACTCGCTCGAGCAACTCCGTAACCTGCG
ACGACCAATATACGATGGTCAATCCGCGGAGGAGCCACTGGGACAGCTGC
TTAGAGATATTTTGTGGTCTGATCCTACGGCCTCGGACGTGGTGAGAGGC
ACGCACGCCTCCCCGCGGGGAGCGGGGATAGCGCTCTTCGGACCGGACAG
GGTGGAAGCCTTTTGTCGGGCCAACGACCTCGACGTGGTGATCCGCTCCC
ACCAGGTGGTGAGTCATGGTTACGAGTTCTTCGCCAACCAGCGTCTGATC
ACCGTCTTCTCCGCCACGGATTACTGCGGCCAACACAAGAATGACGGGGC
CATTTTGGAGATAGACAGGGACCTTGTCATCACCCCCAAGCTAGTCAAAG
ACGACAAGTCGTCGCGATGGTCGATGCCGCGCGATTCCTCCCCACCACGG
ACCAGAGTGCCCTGACAAGGGAACCCCCAGAGGAGTGGCGAGAGGTTCTT
TTCGGGTTTGTACCTTTTTGGAACGGGGACGTATTTGAAATGTAAATGTT
AAATTTCTTGCGTATAGTGCACAGTGCGATTCCTTGGACGGCGCCATAGC
TTTCGAGAAGCCCGATCGCTGAAATGAAAAGCATCAAGAAAAAGAAGAAA
GATGCAGTGCAAGTGTTAAGACGA back to topprotein sequence of rna8857 >rna8857-protein ID=rna8857-protein|Name=rna8857|organism=Nannochloropsis gaditana|type=polypeptide|length=274bp
MGGLFSRHGRHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSE
KMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQ
IEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEI
SRLLSNNLSAGAEEEVLREFDELQALIEAPEHTPVEAAPGAPTVVSADMA
SKDASEQAEITEATEAGSSLPDLPEVPKHEILTKTNVDVRRDKISKETTS
GNARGAGTEEVHVQEKKAKVAVSG back to topmRNA from alignment at KK037250.1:323906..324832- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8857 ID=rna8857|Name=rna8857|organism=Nannochloropsis gaditana|type=mRNA|length=927bp|location=Sequence derived from alignment at KK037250.1:323906..324832- (Nannochloropsis gaditana)
AAGGGAATTGGGCACTCCGTGTTCGCCTACATTTTCAAGGAATATACGCA
CATTTGAGCGCTGACATCACTGTCCACATTGTACTGGTACCACCATACAG
GAATGGGCGGGTTGTTTTCTCGACACGGACGTCACCATGGTGGGAAGTCT
CCTAAAAAGCCCGTCCAAATCACGGACCACGACAGGGCAGTGCTGGACCT
GAAAGTAGCAAAAGACAGGCTGAAGCGTTATCAGATGAAGATGCATAGTG
AGAAGATGCGCTTGACGGAGAAAGCGAAGGAATTGGTGACTGCGGGACGA
AAGGATCGGGCGTTGCTCGTGCTAAAAATGCGACGCCTGAGGGAAGATGA
GCAGGCCAAGGCGGCGGGGCAGCTACTGAATGTTGAGCAGCTCATCACAC
AAATTGAATGGGAGAGAGAACAGCTCCAGGTTTTCGACGCTTTGAAGAGC
GGAAATCAGGCTTTAGAAGCCATTCACAAAATTGTATCTCTGGAGGAAGT
AGACAAGCTCATGGCGGACACGGCGGACTCCATCGCGTACGAGCAAGAAA
TATCCCGCCTCCTCTCCAACAACTTGTCCGCGGGCGCAGAAGAAGAGGTA
CTTAGGGAGTTCGATGAGCTGCAAGCGCTAATAGAAGCCCCGGAGCACAC
TCCTGTGGAAGCTGCTCCTGGAGCTCCGACCGTTGTTAGTGCGGACATGG
CTTCGAAAGATGCCAGCGAGCAAGCCGAGATAACCGAGGCTACAGAAGCA
GGATCTAGTCTGCCCGACCTCCCCGAGGTACCAAAGCATGAGATTCTTAC
CAAAACAAATGTTGATGTGAGAAGGGATAAAATCTCGAAAGAGACTACGT
CTGGAAACGCCCGAGGGGCTGGAACAGAGGAAGTGCACGTACAAGAAAAG
AAGGCCAAGGTGGCGGTCAGCGGATAA back to topCoding sequence (CDS) from alignment at KK037250.1:323906..324832- >rna8857 ID=rna8857|Name=rna8857|organism=Nannochloropsis gaditana|type=CDS|length=825bp|location=Sequence derived from alignment at KK037250.1:323906..324832- (Nannochloropsis gaditana)
ATGGGCGGGTTGTTTTCTCGACACGGACGTCACCATGGTGGGAAGTCTCC
TAAAAAGCCCGTCCAAATCACGGACCACGACAGGGCAGTGCTGGACCTGA
AAGTAGCAAAAGACAGGCTGAAGCGTTATCAGATGAAGATGCATAGTGAG
AAGATGCGCTTGACGGAGAAAGCGAAGGAATTGGTGACTGCGGGACGAAA
GGATCGGGCGTTGCTCGTGCTAAAAATGCGACGCCTGAGGGAAGATGAGC
AGGCCAAGGCGGCGGGGCAGCTACTGAATGTTGAGCAGCTCATCACACAA
ATTGAATGGGAGAGAGAACAGCTCCAGGTTTTCGACGCTTTGAAGAGCGG
AAATCAGGCTTTAGAAGCCATTCACAAAATTGTATCTCTGGAGGAAGTAG
ACAAGCTCATGGCGGACACGGCGGACTCCATCGCGTACGAGCAAGAAATA
TCCCGCCTCCTCTCCAACAACTTGTCCGCGGGCGCAGAAGAAGAGGTACT
TAGGGAGTTCGATGAGCTGCAAGCGCTAATAGAAGCCCCGGAGCACACTC
CTGTGGAAGCTGCTCCTGGAGCTCCGACCGTTGTTAGTGCGGACATGGCT
TCGAAAGATGCCAGCGAGCAAGCCGAGATAACCGAGGCTACAGAAGCAGG
ATCTAGTCTGCCCGACCTCCCCGAGGTACCAAAGCATGAGATTCTTACCA
AAACAAATGTTGATGTGAGAAGGGATAAAATCTCGAAAGAGACTACGTCT
GGAAACGCCCGAGGGGCTGGAACAGAGGAAGTGCACGTACAAGAAAAGAA
GGCCAAGGTGGCGGTCAGCGGATAA back to top
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