EWM21846.1, cds8827 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|585102188|gb|EWM21846.1| (snf7 family protein [Nannochloropsis gaditana]) HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
Query: 1 MGGLFSRHGRHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQALIEAPEHTPVEAAPGAPTVVSADMASKDASEQAEITEATEAGSSLPDLPEVPKHEILTKTNVDVRRDKISKETTSGNARGAGTEEVHVQEKKAKVAVSG 274
MGGLFSRHGRHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQALIEAPEHTPVEAAPGAPTVVSADMASKDASEQAEITEATEAGSSLPDLPEVPKHEILTKTNVDVRRDKISKETTSGNARGAGTEEVHVQEKKAKVAVSG
Sbjct: 1 MGGLFSRHGRHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQALIEAPEHTPVEAAPGAPTVVSADMASKDASEQAEITEATEAGSSLPDLPEVPKHEILTKTNVDVRRDKISKETTSGNARGAGTEEVHVQEKKAKVAVSG 274
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|298711299|emb|CBJ26544.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.124 bits (357), Expect = 1.811e-37 Identity = 91/201 (45.27%), Postives = 130/201 (64.68%), Query Frame = 0
Query: 1 MGGLFSRHGRHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQALIEAPEHTPV---EAAPG-APTVVSA 197
MG L SR + +TD DRAVLDLK ++DRL RYQ K+ E +L +A +V RKDRALL+LK+++L++D+ KA+ QLL+V Q++ I+WE +QLQVF+ALK GN AL +H+ + L++V++LMADTA+SIA E+EIS+ + + + EE++L E EL++ APE P E P AP V A
Sbjct: 1 MGNLMSRKKKRERD-------HVTDQDRAVLDLKNSRDRLTRYQKKLDLECAKLQAQAAAMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFNALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEA-APEPVPATVPEPVPATAPEPVPA 193
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|857971759|emb|CEP02253.1| (hypothetical protein PBRA_002518 [Plasmodiophora brassicae]) HSP 1 Score: 137.502 bits (345), Expect = 4.142e-36 Identity = 72/174 (41.38%), Postives = 117/174 (67.24%), Query Frame = 0
Query: 1 MGGLFSRHGRHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQ 174
MGG+F++ PK I+D D+AV DLKV +DRLK++ +K + +R TE A+ELV A +K++A LVL+ +RL E K+ ++ N+E+L+ I++ QVF ALK GN+AL++I+ + +++VDKLM DTA+++AY+++IS +LS ++A +E LRE D ++
Sbjct: 1 MGGIFTKKAARRPAPPPK--AAISDRDKAVYDLKVQRDRLKKFIVKNDALVVRETEVARELVKAKQKEKAKLVLRKKRLHESMIEKSMAKMANIEELVNSIQFAEITAQVFAALKEGNEALQSINAQMDIDDVDKLMEDTAEAVAYQEQISEMLSGQMTAQDDEAALRELDMIE 172
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|470373698|ref|XP_004333037.1| (charged multivesicular body protein, putative [Acanthamoeba castellanii str. Neff] >gi|440789725|gb|ELR11024.1| charged multivesicular body protein, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 136.346 bits (342), Expect = 8.738e-36 Identity = 83/203 (40.89%), Postives = 125/203 (61.58%), Query Frame = 0
Query: 1 MGGLFSRHGRHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDEL--QALIEAPEHTPVEAAPGAPTVVSADMAS 201
MGGLFS + KK +++ HD+AVLDLKV +D+L +YQ KM + + TE A+EL+ G++ +ALL LK +R +E AK+ QL N++++I +E+ + + +VFD LK+GN+ L+ I +SL V++LMADT ++IA++QEI +L+ L+ EE +L E DEL QA E P E G PT A+
Sbjct: 1 MGGLFS-------SSATKKAPRVSSHDKAVLDLKVQRDKLTQYQKKMRAVVEKETEMARELLRKGQRPKALLALKKKRFQEQLLAKSEAQLSNLQEMIDSVEFAQMEKRVFDGLKAGNEVLKEIQAEMSLNAVEELMADTQEAIAHQQEIENILAGKLTDEDEEAILAELDELVQQAEQEGVPQMP-EVPAGEPTATDPQKAT 195
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|669165740|ref|XP_008618432.1| (hypothetical protein SDRG_14103 [Saprolegnia diclina VS20] >gi|530729904|gb|EQC28146.1| hypothetical protein SDRG_14103 [Saprolegnia diclina VS20]) HSP 1 Score: 134.806 bits (338), Expect = 5.966e-35 Identity = 71/175 (40.57%), Postives = 109/175 (62.29%), Query Frame = 0
Query: 1 MGGLFSRHGR---------HHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEV 166
MGG+FS+ H K Q++ D+A+L+LK ++DRLK+YQ + +E L KA++L+ +KDRA+L LKMR+ + + +A LLNV Q+I +EWE +QLQ+F+ LK+GN L+AIHK +++E V+ LM +T ++ A+ EISR+L LS E+ V
Sbjct: 1 MGGVFSKKTPAPATNAAAERHAANRAKAQQQVSSKDKAMLELKASRDRLKKYQKALEAESATLESKARQLLAKKQKDRAMLCLKMRKFKLQQIEQADTHLLNVHQMIGSVEWESQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAV 175
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|358054374|dbj|GAA99300.1| (hypothetical protein E5Q_05995 [Mixia osmundae IAM 14324]) HSP 1 Score: 133.265 bits (334), Expect = 1.268e-34 Identity = 83/198 (41.92%), Postives = 119/198 (60.10%), Query Frame = 0
Query: 21 VQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQ---------ALIEAPE---HTPVEAAPGAPTVVSADMASKDASE 206
V+IT DRA+LDLK+ +D+LKRYQ+K+ S R E A+E + G K RALL L+ R+ +E K QL ++QL++ IE+ + V L+ GN L+ IHK +++E V+KLM +TAD+IAY+ EI +LS+ +SA EE V E LQ AL AP+ P+E PG PT V A++ + A+E
Sbjct: 8 VKITPQDRAILDLKLQRDKLKRYQVKIESILQREKEIAREALQNGNKSRALLALRRRKYQEGLLGKTDEQLSTLQQLVSSIEYSLIEKSVLFGLEQGNAVLKEIHKEMNIESVEKLMGETADAIAYQNEIDEMLSSTMSAADEEAVQAELAALQAEQIGQAAPALPSAPQGELRRPIE-LPGVPTAVPAEVQEQPANE 204
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|919031159|ref|XP_013399205.1| (PREDICTED: charged multivesicular body protein 6-B-like [Lingula anatina]) HSP 1 Score: 132.109 bits (331), Expect = 3.158e-34 Identity = 78/204 (38.24%), Postives = 125/204 (61.27%), Query Frame = 0
Query: 1 MGGLFSRHGRHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQALIEAPEHTPVEAAPGAPTVVSADMASKDA 204
MGGLFS KS KK ++T+ D+AVL LK +D+LK+YQ K+ + + AK+L+ G+K+RA L+L+ +R +E K QL N+++++ IE+ + + QV D LK GN +L+ +H+I+S+E V+K+M +T +++ Y+QEI LL+ LS E++VL E +E+ E+ P E P P V AD+ + A
Sbjct: 1 MGGLFS--------KSKKKESRVTEQDKAVLQLKQQRDKLKQYQKKITVQLEKDRNVAKQLLKDGKKERAKLLLRKKRFQEGLIEKTDNQLDNIDKMVHDIEFAQIETQVIDGLKQGNDSLKKLHEILSIENVEKIMEETQEAVQYQQEIDDLLAGGLSQEDEDDVLAELEEITK--ESLPEVPQEEVPAMPEVPKADIEEEKA 194
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|813127202|ref|XP_012197271.1| (hypothetical protein SPRG_03304 [Saprolegnia parasitica CBS 223.65] >gi|641538250|gb|KDO32084.1| hypothetical protein SPRG_03304 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 132.109 bits (331), Expect = 5.868e-34 Identity = 83/207 (40.10%), Postives = 123/207 (59.42%), Query Frame = 0
Query: 1 MGGLFSRHG--------RHHGGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQA------LIEAPEHTPVEAAPGAPT 193
MGG+FS+ H K Q++ D+A+L+LK ++DRLK+YQ + E L KA++L+ +KDRA+L LKMR+ + + +A LLNV Q+I +EWE +QLQ+F+ LK+GN L+AIHK +++E V+ LM +T ++ A+ EISR+L LS E+ VL E E++A L AP+ V P APT
Sbjct: 1 MGGVFSKKTPAPANAAAERHAANRAKAQQQVSSKDKAMLELKASRDRLKKYQKALEVESATLESKARQLLAKKQKDRAMLCLKMRKFKLQQIEQADTHLLNVHQMIGSVEWESQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEAAAFEAQLPIAPDDVLVAPLPEAPT 207
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|953449983|ref|XP_014568544.1| (hypothetical protein L969DRAFT_86532 [Mixia osmundae IAM 14324] >gi|658165220|gb|KEI39932.1| hypothetical protein L969DRAFT_86532 [Mixia osmundae IAM 14324]) HSP 1 Score: 131.339 bits (329), Expect = 6.832e-34 Identity = 81/191 (42.41%), Postives = 115/191 (60.21%), Query Frame = 0
Query: 21 VQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQ---------ALIEAPE---HTPVEAAPGAPTVVSADM 199
V+IT DRA+LDLK+ +D+LKRYQ+K+ S R E A+E + G K RALL L+ R+ +E K QL ++QL++ IE+ + V L+ GN L+ IHK +++E V+KLM +TAD+IAY+ EI +LS+ +SA EE V E LQ AL AP+ P+E PG PT V A++
Sbjct: 8 VKITPQDRAILDLKLQRDKLKRYQVKIESILQREKEIAREALQNGNKSRALLALRRRKYQEGLLGKTDEQLSTLQQLVSSIEYSLIEKSVLFGLEQGNAVLKEIHKEMNIESVEKLMGETADAIAYQNEIDEMLSSTMSAADEEAVQAELAALQAEQIGQAAPALPSAPQGELRRPIE-LPGVPTAVPAEV 197
BLAST of EWM21846.1 vs. NCBI_GenBank
Match: gi|1207943712|ref|XP_021361621.1| (charged multivesicular body protein 6-A-like [Mizuhopecten yessoensis] >gi|1207943714|ref|XP_021361622.1| charged multivesicular body protein 6-A-like [Mizuhopecten yessoensis] >gi|1205896881|gb|OWF46476.1| Charged multivesicular body protein 6 [Mizuhopecten yessoensis]) HSP 1 Score: 127.872 bits (320), Expect = 1.502e-32 Identity = 69/177 (38.98%), Postives = 116/177 (65.54%), Query Frame = 0
Query: 13 GGKSPKKPVQITDHDRAVLDLKVAKDRLKRYQMKMHSEKMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQALIEAPEHTPVEAAP 189
K K+P ++T+ D+AVL LK +D+L++YQ K+H + + + AK+L+ G+K +A L+L+ +R +E K GQL N+EQ++ +E+ + + +VF+ LK GN++L+ +H+I+S+E+V+KLM +T +SI Y++EI LL+ L+ EE+VL E DEL A P + P
Sbjct: 5 SSKPKKQPSRVTEQDKAVLQLKQQRDKLRQYQKKIHVQIEKDRQVAKQLLHDGKKSKAKLMLRKKRFQESLIEKTDGQLENIEQMVHDLEFSQIEAKVFEGLKKGNESLKKLHEIMSIEDVEKLMDETQESIEYQKEIDDLLAGGLTEDDEEDVLAELDELTKQDMALPDVPTDELP 181 The following BLAST results are available for this feature:
BLAST of EWM21846.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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