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Properties
| Property Name | Value |
|---|
| Product | Uncharacterized protein family UPF0139 |
| Orig transcript id | gnl|cribi|Naga_100159g8.6561.mrna |
| Orig protein id | gnl|cribi|Naga_100159g8.6561 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:251176..251935 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8823 ID=rna8823|Name=rna8823|organism=Nannochloropsis gaditana|type=mRNA|length=2170bp
TTCTTCACTTCCTTCTGTGCCCAACATGATCGACACCGTCCGTGGTTTTG
TCACGCACGGGCTTAACGAAAAAGTGCCAACCCATCACTACAGATTGTAA
GCATCTATCTAGAAAATTGGCCGCAAGGATGAGGATCTTCTTCTTTTTCG
CATTCTTGTTCGCCTTCATTCTCGCTCAGGAAGTGGTTCGAGGGTTCACG
GGCAGCAGTGGGGGCTTCAGCTTAAGCGAGATTCCAGAGGATCTTCTGGA
TGAAGATGATGCCTCCATTGTTGGTAATGCTGACGGTACCGACTCGTGGA
CAAGCCCGATATCTCTCTCCCGGACCGGTGGCAGGCGTAGCGGCAGTCTG
GCGAACCATGCCATGTGGAATACTCTGCGCGAACAAAGCCACAAAGCTTT
GCTGCCGTCGATTGCCACAGTTCTTGCAGGTGCTACAGGTCGAATATTGC
ATAAGCGCTACGCATCGGTAATCCGTCGCGCATGGCATGACCATCGTGCC
GCCCGCCACTTGGGAAAGGAGAAGCGGCGCCTCGAAAGAGAAATCCAAGA
GGAACAAGGCCGCTATCAACAAGAGATGCGCCGGATCTCGGAGGAACAGG
AGGAGCTGGACGCAGCCGAGGAAGCCGAAATTCAAGCGAGGGACGAATTG
CGACGTGCCCGCTTCCAGGAAGTGTCATCTATGCCCGGGGAGGACGAGGA
GCAAGCACACCAACGAGATCGTCTTCAACAGCAGCAGCATTATCGACCAG
ATTTAAAAAGAAAGAGTTTCAAAGATATGCTTTCATTTTCTGGCCCGTCA
TCTTCGCGCCGGACTGCAGAGGACTGGAGGAGGGTCGTAGGGGAGCTGGA
AACGAAGATAGCCGCTCTCCAGAGGGAGGTTCGCGAGAAGGCGGAGATGG
TCTCGAAGCTCCAGTCTTCCAAGGTGGAAGAGCTTAATAGTGCCCGCTCG
GTGGTCGATCAGCTGCGGAAAGAGCTGGAGGGGGCGCGCGGGATGAAGGA
GCATTTGGAAGGGCAACTCCGGCAGAGTCAGGTGCGTCTGCAGACGTTGA
AGGACCAAGCGGAGGAGGGCCAGGGGCAGAAAGAGCCATCAGAGAATGAC
TTGCACCTTCTCCGCACTGACTTGGAAATGAGAATCCGGCAAGAATACGC
GGAAAGCCGTGCACAGGACCAAGAAGCGTGGGCGAGGGAGGTGCGGCACC
AGACGGTGGCTGAAATCACGGCGCAGACGACGGCGGAGCGCGAGAAGTAC
GAGGCCGACCTGGTTGAGCTTTACCGCCGACGTTTGAAAGAGGAAGTAGC
AAAGCGGGACGCGGTCATGGAGGAGCGTTTGCAGGCCCAGGACGTGGAGT
ATCGGCGGCAGTGTGAGGAGCTCCGGCTAAAGGTGCAGGGGCTGTTGAGG
GAGCGGGACCACAGTCTCCGCGACAAGCTGGTTCTGCATGCCCGAGAGTG
GCAGCAGCGGGTGGGAGCGAAAGGGGGCGCAAGCAAGAGGCAGCGAGCTG
CGGGTGGCCAAGCGCCTGTCCGCGTCGCGGGCAGTGGTGTGAACGGCAGC
CTTTTCCGCGGGAAAGGAGCCTCTGCCCCGTCCAAGGTACCTCGCGGCGG
GGCATCGGCCCCCACGGACACTGCCCAGGAATGGAAAGGAACGAGGGAAG
GAGGCTTGGTAGCGGAGTTGATGGACGCGGAAGAGGCAGAGGCTCGTGCG
AGCACGCGTGCGGTGGGGGCCAGGGAGGGAGGACAGGGGGTTCCACAGGG
TGGCGATGACGGACAAGAACCTTCCAAGCTCGTGCAGCAACAGCGACAAC
GGGTCAGCTGGGGGGCCTCTGGGGTGGGATTGACCGGGGTCGGAGGGGGA
GGTAGCGGCAGGAGGGCCACGTCGGGGGCGGTCGGGAGGAGAGGAGGCGC
GTGAGCGGGTGGGAGGGAACAAAGGCCATGGAAGACGGGGAGAGGACCCC
GGAGGCGCATATTCTAACAGACGAAACGGGGGAGAGGGAGGTTGTGAGGT
GGCACAGCGTTACACGACTTGAGGGCTTGATTTTACGATGGAGGCACAGC
AACATATACTTGGCTGGATGTTGTAAATGTTTAAATGGCAAGGAAAGGAA
TCTTTTGAGGACGGTGGATGTAAAAGAGGAAGGAAATTGAAATGCGGTGC
AGAGGCATCGGTCTCGATCT back to topprotein sequence of rna8823 >rna8823-protein ID=rna8823-protein|Name=rna8823|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MQQATIAPKPQQRTHDPRRSKHIFPYLSLRARDSVEEPYRYDSIGVLSLF
LAVLCILTRLRICAWLSLFMLCSAAANVRYSSFDGRTLFGACIAMLFAFY
TVYIKSFLE back to topmRNA from alignment at KK037250.1:251176..251935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8823 ID=rna8823|Name=rna8823|organism=Nannochloropsis gaditana|type=mRNA|length=760bp|location=Sequence derived from alignment at KK037250.1:251176..251935- (Nannochloropsis gaditana)
AGGGCACTGAGGCACTTAAAGTGTACCGAATATAACTGACACGTCAGGAT
TCCTTGCATTTTCAATAGAGTACACGAGCCTCTGTAAACGTCTCCAACAA
GGAAGGGGAGGAAGAGAATTTCCGTCCAGAAGGAGAAAAGGGGGGCCATC
CAAAATATGCAGCAAGCCACAATTGCCCCAAAGCCACAACAACGTACACA
TGACCCTCGGCGTTCCAAGCACATATTTCCGTATCTTTCCCTTCGGTACG
CACAAAGTATTGATAAAAGGATGTCACCCTTTTGTCCATTGTACTTCCGA
TGTTACAACTCGTCACTCTCTGTCCTTACTCTCCTGTAGAGCCCGCGATA
GCGTGGAGGAGCCCTATAGGTACGACTCAATTGGTGTACTTTCCTTGTTC
CTAGCAGTACTGTGTATCCTTACGAGATTGAGGATCTGCGCCTGGCTTTC
GCTTTTCATGTTGTGCTCAGCGGCAGCAAATGTCCGCTACTCCTCCTTTG
ACGGTCGTACTCTCTTCGGAGCCTGTATAGCGATGCTTTTTGCATTCTAC
ACGGTATACATCAAAAGCTTCTTGGAATGATAAATGATGATTGTACATAG
ATGTAACTGCCTTCTTACCTCTCGTGGAAGACACGGCAATCGGTGGCGAT
GGATGGCTTCGACCTTTGAATCGTGATGGGGCGCCTGTCTAACAAACTGT
ACATAACGTGAAAATTCTGAAAAAAGAAACGCCGAGAAGAATTGTTACAC
AGATCGAGAC back to topCoding sequence (CDS) from alignment at KK037250.1:251176..251935- >rna8823 ID=rna8823|Name=rna8823|organism=Nannochloropsis gaditana|type=CDS|length=660bp|location=Sequence derived from alignment at KK037250.1:251176..251935- (Nannochloropsis gaditana)
AGCCCGCGATAGCGTGGAGGAGCCCTATAGGTACGACTCAATTGGTGTAC
TTTCCTTGTTCCTAGCAGTACTGTGTATCCTTACGAGATTGAGGATCTGC
GCCTGGCTTTCGCTTTTCATGTTGTGCTCAGCGGCAGCAAATGTCCGCTA
CTCCTCCTTTGACGGTCGTACTCTCTTCGGAGCCTGTATAGCGATGCTTT
TTGCATTCTACACGGTATACATCAAAAGCTTCTTGGAATGAATGCAGCAA
GCCACAATTGCCCCAAAGCCACAACAACGTACACATGACCCTCGGCGTTC
CAAGCACATATTTCCGTATCTTTCCCTTCGAGCCCGCGATAGCGTGGAGG
AGCCCTATAGGTACGACTCAATTGGTGTACTTTCCTTGTTCCTAGCAGTA
CTGTGTATCCTTACGAGATTGAGGATCTGCGCCTGGCTTTCGCTTTTCAT
GTTGTGCTCAGCGGCAGCAAATGTCCGCTACTCCTCCTTTGACGGTCGTA
CTCTCTTCGGAGCCTGTATAGCGATGCTTTTTGCATTCTACACGGTATAC
ATCAAAAGCTTCTTGGAATGAATGCAGCAAGCCACAATTGCCCCAAAGCC
ACAACAACGTACACATGACCCTCGGCGTTCCAAGCACATATTTCCGTATC
TTTCCCTTCG back to top
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