|
|
Properties
| Property Name | Value |
|---|
| Product | werner syndrome exonuclease |
| Orig transcript id | gnl|cribi|Naga_100231g6.10121.mrna |
| Orig protein id | gnl|cribi|Naga_100231g6.10121 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:224738..226330 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8810 ID=rna8810|Name=rna8810|organism=Nannochloropsis gaditana|type=mRNA|length=4227bp
CTTTACGTCCGACACGAGCCGAAAACTCTTCCTGCCTAACCAGTGCATGG
TAAGCACGTCGCTGGCCACGTAAAATCATCTCCTGATCTCTGCCTGTGGG
TTGGTCCGTGGAGAAAGTACGGGGTCAGAGGCCGGGGCGAGCAACACGTA
AGTTTCCTTGAGGCTCGTCCTCCCGTTCAAGCGAGGCCCCCCGCCAGGCC
GGGCCGCAAAGATTTAGCTGGCTGCCCACTCCTGGTTCTCCATCACCACA
CAGCGAGGCATGCGCTTTATCCTTCGGACCTCGCGCATGGGCATATGGAT
GGCTCGCGGCGATGATTTTTCTTTTCGATTCCATGTTTTTGCCGCGTTTC
CTCATGAGGGTTCTCGTCTTCTTGGCAGTCAAGCTGGGCAGGAATCACCA
TCCAAGGACAATTCACAAATGCATTCCAATTACCTCCTTTAAATCTAAAC
TATATCCAGAGGATTGGGGATCGGGACGTGTGGTTTTTTTCCCATGATCA
TGCATTCTTACGGTCTTCGAGAGTAGTCGAGAAAGAGGATGGCGCATTTC
CGACTGTTTTGAGGGCACCGACTGTCTACAGCCTTCTCTTTGTCTTCCGT
TCCCGTCTCGCTTTGTCTGGCATAGAATTTGATTGGAGTAATGTATGCTT
CAGCACGATTGCGACTGAAAGTTATCTCCAAAATTTGCTTGCTCGGGTCA
ATTTCGAAGCTCATCACGAGACGTTCCTCACGTACCTCCTCAACACTCCC
AAGCAGGCGCCTGTGGATCACTTTTGAAAGATAGAACCATGTTGGAAAAA
CAGCAAAAGTATGAAGTGGAAGAAGGTTGACGTCACAGTGGTTGCGGTGG
CGTAAATTTGTGTCGGACAGAAGCAAAGCTGCAGCGTGGAGCTCGACCTG
GCTGTGGGCACGTCGCCTGTTGGGCCGTAAGTATATAAATAATATCGACT
TGCGGTAGCGATTATCAGCAGCAGCCATAGAGGTGAAGTCGGCGGTGTTT
TAAAAGGCGGGTCGTTTGAGCATGTCCTCGACGACATGTCCTGTGTTTCG
GCCCTCCAGGGAGGAGTTCAAGAACTTTTCAGCCTACATCGACAAGATTG
ACAGTAGGGTAGGAAATGCTGGGCTGTGCAAAATTATACCTCCGGAAGGC
TGGTATGATACGCCAACGGAGGCCGAGTTCGAAGGCATGTGGGCGGAGCG
AGGACTGGTGGTGCCCCCCATCAAGCAGTGTGTCTCTGGCCTCAGGGGCG
TGTACCAGTTGGGCCTGATGGACGGCAAGAAGATGGCCGTCAAGGACTTC
CAGGCCCTGGCGAAGAAGACGGAGCCCGACCAAGCCATGTCGTACTCGGA
GATCGAGCGCTTGTTCTGGCGCAGTATGGGTCCCCTGGCGCCCCCTCCTC
TCTACGGCGCGGACATGAGCGGCTCTCTCTTCCGCGATCGGGCTAGCGGG
TGGAATCTGTCGGAGCTGGACAACATGATTAAGCTGCTGCCTTCCAATCT
GCCCGGTATCACCACGGCCATGCTGTACTTTGGGATGTGGCGCGCCATGT
TTGCCTTCCATACGGAGGACATGAACTTGTACAGCATCAACTACCTTCAC
GCGGGCCGGCCCAAGAGCTGGTATTCCATCCCCCCCCACGCTCAAAGGCG
CTTTGAGAGTCTGGCGCAGTCCCTGAATCCCCAAGGCTTCCGGACCTGCT
CGGAGTTTTTGCGTCACAAAACCAGCATATTCTCGCCCAAGGTGCTCCGG
GAGTCCGGCATTCCCTTCCACACCCTGGTGCAGGAGCCGGGGGAGTTCGT
CGTCACTTTTCCTGCTTCCTACCACGCAGGCTTCAACCACGGATTCAACA
TTGCGGAGGCGACAAATTTCAGCACGGAGCGATGGTTGTCCAAGGGCCGC
GAGGCCAAGGTTTGCCGGTGCCAGCCCTACTCGGTCCACATCAATATGGA
CGACTTCGCTGCCAAGCTGGCCGCCAAACGTGCCGCAGACCAAGCCCGCG
TGGAAGCGCTGCCGAACAAAACGTCCAAAATAGACCGGAAAAAGATCTTG
AGGCGTTTGAGCTACATAGGGTGGATGGCCTGGCGGGAGCAAGAGGAAGA
AGCGAGGCGAGTGGAGGAAGCTTTGGCGGTCAAGGAGCGTCAGCGCTTAC
AGCGGGAGCAAACGAATTTGCGTCGGAAAGAGAAGGTTCGACGGCTGAAC
GGGGGGACGCTTAGCCTGACTGTGGGGGAAGGGGAAGGTGGTGGGGATGG
CCAGTCTGCAGAAGACTCGGAGGAGCGCGTGGGAGGAGACGAGGGGGAGG
ACGAGGAGGACGGCGGGCCCGCCCGCCAAGGTCTCGAGGTGGACCTAGCG
GCGCAGAAGCAGTGGGACTTTCGGTGTCGCTGCGGGGTGGCCGCAACGAG
TGGGGCACCAGTGCAGAGCTGGCCGAAAGGCGCCATCTTCCAGTGTGCGG
GCTGCTTGGCCTGGTCGCACACGCGCTGCCTATACAGCAAGGACCACGCC
CCCCGCCGGGCGTTCTGTGCAGGCTGTCATCAGGTATTGCAGCGATTGGA
AGCATCGGGTGCGGATTGGCCCACTGGGCGGCGGATCAAGCTGCGGTCAA
AAGTGGTGGTGTGTCGGGGCCCGCGAGGGCTGGAGGAGGGAAGCGTGACG
ATGATCGGAGAGGGGATGGCCCGAGTCTACTTTAAAGGAATGAAAAAGCC
AAGAAAACGCGATAGGGCAGGCGCGCCGGGAGAGACATGGCCGAAGGCGC
TCAAGAGGCCTATGGAAGAATGGGTAAACGTGATGTCCAGTCGCTTTCTG
AGTCGAGAGCGAGTCCAAGCAGCCCTTGGCCAATTTAGCCTCCAGTCTAT
TCCGACACAAGACTGCGCAATCAGTGAATCTATAAAGATGCAAACGCCGC
AACCTCAGAAGATAAAGCTGGAGCAGGGACTTTATCATCACGGAGATGTT
GCCACGAGTGCAGGGCATTGCTGCAGGGATCAGGTAATTTCCGCGTCGTC
ACTTAGAGGGTCAGGTGCGGCGCAGCCCCCAGCAAATACCAAGCGTGGCA
TGGCTCCCCATCCAGCTCCCTTGCTTCGGGGCGTCCCGTTGCCTGACGCC
CAGGCAGCTGTGCGCCACGCCAAATTTCAGAAGGACCTGGCTAGAAGCAA
GAAGGCTTTCCGCAGCCTCTTTTCCCCCACTCGCAATGCGGAAGCTGTCC
CAGGGGTGTCGTACAGTCGATATCATGCCGCGCACAATGCATCCATCTTT
GACGGAGAGTGGTCCGACGACGAGGAGGGAGAAAGGAAAGTGCTAGAGGA
GCAGTGCAGGGGGCTGCCACTGGGCAACGGCGACCTCGCAGGTGGGCTGA
ACGGGGGCCGAGGGTGTGGGAGTGCGCACGACGACTTGTCGAATGGCGGT
CATGTCCTTCCAAAATGTCGTGGAACCGACGGTGCGACCGAGCGAGCGCA
GGAGCCACCTGCCAACTCCTGCGCCCTGGCTCAAGGCGCTCACGTCCCTT
CCTCGTCGGCCTGCCTATACCCGCTACAACAGCACCATGAAGGAGCGCAA
TGCGGTGCTCTCAAATGCCCGCATCAACCATCAAGCACAAGGCCGTCCAC
AGAGTCTTCCATTAAGAATGCCAGCTTGGATGTGTCAGGCGAGGGAAGTT
CTTCCGTTGCGGCGTCGCGAGTCAGCACCGTGTACGAGTGCCGTACAGGA
ACGGGAAACTGTGCGAACATAAAGTTGACGTCAATGGACTGCGGCCAGGG
CTTGCGAAATGCGGGGGTTCCGGCGATGGGGCCCGGGGCAGTCGGTGCTA
CCGCCGGGACAGTAGGGGCCTCTCGCGGCATATTGGGACGAGGGCGATGA
CTGTGACCAGGTTGCGTCAGGGGAGCGTCAGGCCTTGGAACGCTTGATGG
CCGTACAGAGGGCCAGACGATTCAATCTATCAAAGAAAGAAATCAAAGAG
AGGTGTGCTGTGCATATTGCGTATTTGTATAGAAACTGCGCTTCAGAAAC
GAGGAAAGGCTCCAATAGGCGGCAGCGATACCTTAGAACGTCAGCATATG
GTGCAAGAGAGGGTAAAAGAAATTGAGTCGGGGCAGTAGAAGAACGTAAA
GAAAAATGACGATGATATCCAATGTTAGGCCTCGGATGAATTGATGCGCT
GCAGGTACTCTCGGGCAAAGGATTGTGGGCACACCAAAGAAAAAACTAAA
GGCTGGCTTCTGATGCCAGCGACCAAG back to topprotein sequence of rna8810 >rna8810-protein ID=rna8810-protein|Name=rna8810|organism=Nannochloropsis gaditana|type=polypeptide|length=410bp
MILRGQRRAYHALVRQEEFSARVGRKGVLPSSRPPPRGLACAVMDEGASW
DSLGKQGLHSVQIEEPVAEYMEGGPLSRQSDSCNLTRMIEMTCPFSYGRG
RETVKVAVIQGTTAANYWCDRLCHRVRKELGPGGGDGAIGLDVEWRPSFK
PNQPARRSAILQLSGPGLCLIIQLQRLSHIPRQLGRLLRDPTLPKVGVSV
EEDLARLREDWGLSSRCFVDVGRVGGRVFPEGAPFRIISLQKLMGALWGI
CLPKPQSIRLGNWETPELSSRQVEYAALDAMAGRAIYQAFHRRGLLDKVT
LEELMLKWSLSSDEKDLKRARSLALESDLLRHLYVRFTGLQPTRPRAGNR
RFGSDAISTGSKDKGGSSSRREGDRDRSGRSRTRGSTLAPVRRTIVVSEE
PFSLQEIAVV back to topmRNA from alignment at KK037250.1:224738..226330+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8810 ID=rna8810|Name=rna8810|organism=Nannochloropsis gaditana|type=mRNA|length=1593bp|location=Sequence derived from alignment at KK037250.1:224738..226330+ (Nannochloropsis gaditana)
CCCACAGGCAGAGATCAGGAGATGATTTTACGTGGCCAGCGACGTGCTTA
CCATGCACTGGTTAGGCAGGAAGAGTTTTCGGCTCGTGTCGGACGTAAAG
GAgtacttccctcctcgcgacctcccccccgcggccTCGCGTGCGCGGTC
ATGGACGAAGGGGCCTCATGGGACAGTCTGGGGAAACAAGGCTTACACAG
TGTCCAGATTGAGGAGCCAGTGGCAGAGTACATGGAGGGTGGGCCGTTGT
CTCGGCAAAGTGACTCGTGTAATTTGACCCGGATGATTGAAATGACTTGT
CCCTTTTCGTACGGCAGGGGGCGTGAGACCGTCAAGGTAAGCCAACACGC
ATGGGTGAAATGGCTGGCGCTAACTCCTCTCGTCAGTATCAGCACGTTTT
TGAAGCCCTTTGTCGGCTCCTATGCTGCGCCTTTTTCTCGCGATGACAGA
GAAAAGGACTCCGCATACCTGACAGTCTCCATGGAGACGAAAAGCCACCT
CACAGTCCTTGCCCATACTTTAGGTGGCCGTCATACAAGGTACAACGGCC
GCGAACTACTGGTGCGATAGACTCTGCCACCGCGTGCGGAAAGAGCTCGG
gccaggcgggggggatggggccaTCGGTTTGGACGTAGAATGGaggccct
ccttcaagccGAACCAGCCCGCGCGTCGATCGGCCATCCTCCAGCTCTCG
GGCCCCGGCCTCTGCTTGATCATCCAGCTCCAGCGGCTGAGTCACATCCC
CCGGCAGCTGGGAAGGCTTTTGAGGGACCCCACCCTGCCCAAGGTGGGTG
tctcggtggaggaggacttggcCCGGCTCCGGGAGGACTGGGGGCTCTCA
TCGAGGTGCTTCGTGGACGTCGGCCGCGTGGGCGGGCGCGTCTTCCCAGA
AGGCGCCCCCTTCCGTATCATATCCCTGCAGAAGCTGATGGGGGCCCTGT
GGGGAATCTGCTTGCCCAAGCCCCAGTCGATCAGGCTTGGGAACTGGGAG
ACCCCGGAGCTCTCTTCGCGTCAGGTCGAGTACGCCGCGCTCGACGCCAT
GGCAGGCCGGGCCATCTACCAGGCATTTCACCGGCGGGGGCTCCTGGACA
AGGTcacgctggaggagctgatgcTGAAGTGGTCCCTCTCTTCGGACGAG
AAGGACTTGAAGCGGGCCAGGAGCCTGGCGTTGGAGTCCGACCTCCTGCG
CCACCTCTACGTACGGTTCACAGGCCTGCAACCCACGAGGCCGCGAGCAG
GAAACCGACGTTTTGGTTCGGACGCCATATCTACCGGGTCTaaagacaag
ggagggagcagcagcagacgcGAGGGGGACCGCGACCGGAGTGGGAGAAG
CAGAACGAGAGGCAGCACTCTCGCGCCGGTGAGGCGCACCATCGTCGTGT
CCGAAGAGCCATTCTCGCTTCAGGAAATCGCTGTTGTATAGGCCCTATAA
ACTGCGATGCACGCGAAATGTCACTGTGTTGATAGAGTCTCAACCTGCGT
ACTAGATCTCAGTAAGTTGAGTGCCCGGGCGGCACATAAAAATAGGCCAA
AACGCTCCTGGTGTAAAATAACGACAGATTAAGCAGTCTACTA back to topCoding sequence (CDS) from alignment at KK037250.1:224738..226330+ >rna8810 ID=rna8810|Name=rna8810|organism=Nannochloropsis gaditana|type=CDS|length=2466bp|location=Sequence derived from alignment at KK037250.1:224738..226330+ (Nannochloropsis gaditana)
ATGATTTTACGTGGCCAGCGACGTGCTTACCATGCACTGGTTAGGCAGGA
AGAGTTTTCGGCTCGTGTCGGACGTAAAGGAgtacttccctcctcgcgac
ctcccccccgcggccTCGCGTGCGCGGTCATGGACGAAGGGGCCTCATGG
GACAGTCTGGGGAAACAAGGCTTACACAGTGTCCAGATTGAGGAGCCAGT
GGCAGAGTACATGGAGGGTGGGCCGTTGTCTCGGCAAAGTGACTCGTGTA
ATTTGACCCGGATGATTGAAATGACTTGTCCCTTTTCGTACGGCAGGGGG
CGTGAGACCGTCAAGGTGGCCGTCATACAAGGTACAACGGCCGCGAACTA
CTGGTGCGATAGACTCTGCCACCGCGTGCGGAAAGAGCTCGGgccaggcg
ggggggatggggccaTCGGTTTGGACGTAGAATGGaggccctccttcaag
ccGAACCAGCCCGCGCGTCGATCGGCCATCCTCCAGCTCTCGGGCCCCGG
CCTCTGCTTGATCATCCAGCTCCAGCGGCTGAGTCACATCCCCCGGCAGC
TGGGAAGGCTTTTGAGGGACCCCACCCTGCCCAAGGTGGGTGtctcggtg
gaggaggacttggcCCGGCTCCGGGAGGACTGGGGGCTCTCATCGAGGTG
CTTCGTGGACGTCGGCCGCGTGGGCGGGCGCGTCTTCCCAGAAGGCGCCC
CCTTCCGTATCATATCCCTGCAGAAGCTGATGGGGGCCCTGTGGGGAATC
TGCTTGCCCAAGCCCCAGTCGATCAGGCTTGGGAACTGGGAGACCCCGGA
GCTCTCTTCGCGTCAGGTCGAGTACGCCGCGCTCGACGCCATGGCAGGCC
GGGCCATCTACCAGGCATTTCACCGGCGGGGGCTCCTGGACAAGGTcacg
ctggaggagctgatgcTGAAGTGGTCCCTCTCTTCGGACGAGAAGGACTT
GAAGCGGGCCAGGAGCCTGGCGTTGGAGTCCGACCTCCTGCGCCACCTCT
ACGTACGGTTCACAGGCCTGCAACCCACGAGGCCGCGAGCAGGAAACCGA
CGTTTTGGTTCGGACGCCATATCTACCGGGTCTaaagacaagggagggag
cagcagcagacgcGAGGGGGACCGCGACCGGAGTGGGAGAAGCAGAACGA
GAGGCAGCACTCTCGCGCCGGTGAGGCGCACCATCGTCGTGTCCGAAGAG
CCATTCTCGCTTCAGGAAATCGCTGTTGTATAGATGATTTTACGTGGCCA
GCGACGTGCTTACCATGCACTGGTTAGGCAGGAAGAGTTTTCGGCTCGTG
TCGGACGTAAAGGAgtacttccctcctcgcgacctcccccccgcggccTC
GCGTGCGCGGTCATGGACGAAGGGGCCTCATGGGACAGTCTGGGGAAACA
AGGCTTACACAGTGTCCAGATTGAGGAGCCAGTGGCAGAGTACATGGAGG
GTGGGCCGTTGTCTCGGCAAAGTGACTCGTGTAATTTGACCCGGATGATT
GAAATGACTTGTCCCTTTTCGTACGGCAGGGGGCGTGAGACCGTCAAGGT
GGCCGTCATACAAGGTACAACGGCCGCGAACTACTGGTGCGATAGACTCT
GCCACCGCGTGCGGAAAGAGCTCGGgccaggcgggggggatggggccaTC
GGTTTGGACGTAGAATGGaggccctccttcaagccGAACCAGCCCGCGCG
TCGATCGGCCATCCTCCAGCTCTCGGGCCCCGGCCTCTGCTTGATCATCC
AGCTCCAGCGGCTGAGTCACATCCCCCGGCAGCTGGGAAGGCTTTTGAGG
GACCCCACCCTGCCCAAGGTGGGTGtctcggtggaggaggacttggcCCG
GCTCCGGGAGGACTGGGGGCTCTCATCGAGGTGCTTCGTGGACGTCGGCC
GCGTGGGCGGGCGCGTCTTCCCAGAAGGCGCCCCCTTCCGTATCATATCC
CTGCAGAAGCTGATGGGGGCCCTGTGGGGAATCTGCTTGCCCAAGCCCCA
GTCGATCAGGCTTGGGAACTGGGAGACCCCGGAGCTCTCTTCGCGTCAGG
TCGAGTACGCCGCGCTCGACGCCATGGCAGGCCGGGCCATCTACCAGGCA
TTTCACCGGCGGGGGCTCCTGGACAAGGTcacgctggaggagctgatgcT
GAAGTGGTCCCTCTCTTCGGACGAGAAGGACTTGAAGCGGGCCAGGAGCC
TGGCGTTGGAGTCCGACCTCCTGCGCCACCTCTACGTACGGTTCACAGGC
CTGCAACCCACGAGGCCGCGAGCAGGAAACCGACGTTTTGGTTCGGACGC
CATATCTACCGGGTCTaaagacaagggagggagcagcagcagacgcGAGG
GGGACCGCGACCGGAGTGGGAGAAGCAGAACGAGAGGCAGCACTCTCGCG
CCGGTGAGGCGCACCATCGTCGTGTCCGAAGAGCCATTCTCGCTTCAGGA
AATCGCTGTTGTATAG back to top
|