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Properties
| Property Name | Value |
|---|
| Product | putative zinc ring finger protein |
| Orig transcript id | gnl|cribi|Naga_100070g25.4240.mrna |
| Orig protein id | gnl|cribi|Naga_100070g25.4240 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:197394..201160 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8799 ID=rna8799|Name=rna8799|organism=Nannochloropsis gaditana|type=mRNA|length=3088bp
TGTTTGAATCACTCACTGGGCGCCAACCCCCCTCTCAGCAACTTCATCAC
CTCCATCCAGGCCCCCGGGACGGCAAGCAGGGATGGTAGCAGCATCAGAA
AAGGCAAAGGGCCGCGTGCTGCTACCCAAAAATGTTGTTCCACTAAAGTA
CGACTTGACTTTAGACGTAGACCTTGACAAGTTTATTTTTGACGGAAATG
AGAAGGTGGAGTTGCAGGTCGTGGAAGAGACAGCCACGATTGTCTTGCAC
TCGAAGGAGCTCCTGATCAAGCATGTGACGTTTACACCCCAGGGAGGGAA
GCCGATTGAGCTGATCGGCCTAGCGCACAACTTGAGGCACCACACACTCG
CCTTCACCTTCGCCTCACCGCTGCCGGTGGGCTTGGGAGAGCTCCACGTT
GTGTACCAGGGATCCCACAACAATCAAATGGCTGGCTTCTACCGCTCTGG
ATACACGGACATCGCGGGGAAGAGCAAGGTCATGGTCTCCACGCAGTTCG
AGTCCCTGGATGCCCGGCGCGCCTTTCCCTGCTGGGACGAGCCCGGCGTG
AAGGCTGTCTTCGAGGTGACGCTTGTTATCCCCAGGGCCCTCACCGCCTT
TTCCAATATGCCCGAGGTGGAGTCGTCCGAACAGTCCGGGACGGGGAAGC
GGGTGCTTCGGTACGCCCCCACACCCAAAATGTCCACCTACCTGCTGGCT
TTCGTGGTAGGCGAATTCGACTTCGTGCAGGACATGACGAAGCACGGGGT
AATGGTCCGGGTCTACACGCCGCCAGGCAAGGCGGAGGAGGGGCGCTTTG
GGCTGCGCGTGGCCAAAGACACGTTGGACCTCTACGACGACTTCTTCGCG
GTCCCCTACCCCCTCCCCAAGCTGGACATGGTGGCCATCCCCGAATTCGC
CATGGGGGCGATGGAGAACTGGGGTTTAGTCACGTACCGGGAGGTGGACA
TCCTCATCAACGAGCACAAGGCGTCTTCGCAGCAGAAACAGCGCGTGGCG
ACCGTGGTGGCGCACGAGCTGGCGCATCAGTGGTTCGGGAACCTGGTCAC
CATGCAGTGGTGGGACGACCTATGGCTGAACGAGGGATTTGCCTCCTGGA
CGGAGAACTACGCCACCGACATCCTTTTCCCCGACTGGCTCATGTGGGAA
CAATTCACCATCGACGCTCAGAACGCTGCCCTCAACTTGGACTCTCTCCG
AACGTCGCACCCAATTCAAGTCCCCATAGCCCACGCGGAGGAGGTGGAGC
AGGTATTCGACGCCATCTCTTACTGCAAAGGCGCCTCCGTCGTGCGCATG
CTGCACGCCGTGCTCGGGCCTGCGGATTTCAAGCGGGGACTACAACTCTA
CATGCAGCGGCACCAGTATTCGAACACGGAGACCTTCGATCTCTGGAACG
CGTGGGAGAAGGTGTCGGGCAAGCCAATCGGGCAGATGATGGCCTCCTGG
ACGGAGCAGATGGGGTACCCGATCGTGCGTGTCGAACAGGCGGATCTGAC
GGACGGCAAGGCCTATCTGACGGTCAGCCAGTCTTGGTTCCTTGTGGAAG
GGGCCTTGTCCAAGGAGGAAGAGAGCAAACTGTGGACCGTTCCCCTCCTT
TACGGCACGGCAGCCTCCGTCAACGGCTCCACTGGAGTTCGACCCGACCT
CCAAATCCTGACCTTCAAGACGGACACGATCGAGGTCCCTTTGAGGGGTC
CCAACGATTGGGTGAAGCTGAACCTCGGGCAGCACGCACCTTTACGCGTC
CTCTACCCCCCTGTCTTGTTGGCCCGCCTGGCCGCTGGTGTTCGGGACAA
GACGTTGCCCGCGACCGACCGGGCGGGCCTGCTCATGGATTGTTTCAATT
TGACGAAGAAGGGAGAAATTCCGGCAACCCAGCTCCTGACACTTATCAAG
GCATACGAGCAGGAAGACAACAGTACGGTTTGGGAGGCCTTGGCCCAAGT
ACTCACGGCGCTCGACAAGCTGCTGATCCAAGCTCCCGAAATTCGGAAGC
GCTTTGGCCACTTCGCGTCGTCCCTGGTCAAGCCAGCCGCTCTCAAGGTG
GGCTGGGACCCACGCAGCGATGACGGGCACTTGGGAAAGCTGCTGCGAGC
CACTCTTATCAACCTCCTCTCTCTCTTCTGCTGGTCAGAACCGGAAGTGC
TCGGCGAGGCCCGCCGGCGGTTCGAGGCTATTCTCCTCAACCCCTTAGAC
GTGGCGACCCTGCCCACAGAGTACAAAGTACCAGTCCTGAGCATGGTCCT
CAAGGCCGGACATCAGTACGAGTTCGATCAGGTAATGCGTCTTTACCGGG
ATGCCCCCTCCAACGTGGAAAAGAAACAGGTCTATAATGCCATCGGAGCC
ACGTCGGACCCCAAGCTCAAACGCCGCGTCCTTGATTGGGCCCTGCAGGA
CATCAAGCTGCAGGATTTTTTCTATCCCATTGGCTCCGTCTCCAGCTCCT
CTCATGAAGGCCTGGAGCTGGCCTGGGACTTCTTCAAATTGAACTTGCCA
CAGCTCAAGGCGAAACTGGCGACTGCCTCCTCCTCTCTCATGGACGCTGT
CATAGTCTACTCGTGCGGGAGCTTTTCCACCGCCGAGAAGGCTGACGAAA
TAGAGACATTTTTCCGAGAAAACCCTTTGCCCTCTTCACAACGCAAGATT
GCGCAGACTCTAGAGAGGATACGCATCAACGCCCGCTTTCTGGATCGCCT
CCGCAGTGAAATTGGAAATTCGGCGTTTTGGAAAAAGCTTGCGGGCGAAG
TGTAAAGTTATGTGAAAGATTATTCGTTGTCTGGGCTAGAAGGCAGCTGC
TAAAGATTTCGGTGGCAAGTTTCAATAGTGATAGGAGAGGGTAAAGGGCA
CAGATGGACTGGGATGTTTTTGTCGTGGGTAACGGTTCAGGCGAATGTTG
TCGTGAAGGAAGATGATCATGTTGCAACAAAAGACTACATTTAAGAAACA
GATAAGCTGCGTCCGTGCAGTTCAATATGAGATGTGCGTCTGCATCTTCA
CGGCATGGTAAAAAGAATTATCAAGCCGCGCAAGGAGTATTTGCCCTAGC
GAGGTCGAAGAAGTAGATATCTGGCGTCAGAGTACTTT back to topprotein sequence of rna8799 >rna8799-protein ID=rna8799-protein|Name=rna8799|organism=Nannochloropsis gaditana|type=polypeptide|length=615bp
MENDFGKRSLDGPAPVTNSAITAHPLRFCLTLLAEECLKSNQSLPPSVDL
SELPVAMGRACGQAQGTLNYAKRVSLMGIGISRQHCSLVQGPDNSLQIVD
ESSQGVAVNGVRIPPQTPRTLKVGDVVVLGLPMAHDHPVGALSSSGSGSM
SKGGAVFRVDCLPADRARDSPAVRESDALNAEETSPSSISATSTWTDTPA
VCTMSSADAASAHQGGACNKPGRQGDGAASLDVANESEHLERGERSQVEA
ESTAKEAGGEHEGVAQESDRNSDVEIVEVRSAATVPPRGARKRRRPVQVV
SLLDDDDEDEAETIIGALDAGAGRGWQESQMTRSAGVCRAAACAEEKEYK
RRWLKALECPVCMEPLCAAAHMSCGHIACFTCIHRRFALQSVEDGSAYGF
QDRKRLCPVCRKAVFFMSRDVKMDELVDESMSNHADRMTTAERAVWERRK
RDGLALSQFYERKIHNNPQNLVHRRREIGVKVSIKTVTASGSRRGDMSTL
CSECRQAIGGPSGRYIAVWKLTPTQGFRPVPCVASVHLECLKSSTCKAIR
AGLSPDGILSLLYRLDVLGLLADEENGIEGFRKKVFQALSEERQEYPWWV
DGAVRLQICGQDIRG back to topmRNA from alignment at KK037250.1:197394..201160+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8799 ID=rna8799|Name=rna8799|organism=Nannochloropsis gaditana|type=mRNA|length=3767bp|location=Sequence derived from alignment at KK037250.1:197394..201160+ (Nannochloropsis gaditana)
cgaggcttAGGGGGGTTACTCCATGCCCTCGTGGCCGCGTCCGGGCGAAA
ATGCCATTTTCAGGGCTGGTTTTTGTCCGCTGCTGGTGCGGTTGTAGTCG
TGTGCGAAGTATGACAATGCATTTTGTGTCGTATCTTCTATTGGTTCATG
AAGAAGCATGATCTCAGCCGACGCTTTCAGCTCAACTTGCTCGAATGACT
AATCctcattttatttttttgTGGGAAATGAAGCTCTGTGCAACCCTGCT
GTACCTACGTTCTCAACTTCGTTTCGGTGGCttgagaggagggacgtCAC
TTCAGTCCTTTCCGCACTTTTGTGTCAGGTAGCTCCACATTTTCCGGGAA
CAAGTAACTTCGACGCCGACACTGGATGGAAAATGACTTCGGCAAACGCA
GTCTGGATGGACCTGCGCCTGTGACAAACTCCGCCATAACAGCCCATCCT
TTACGATTTTGTCTCACCTTGTTGGCAGAGGAATGCTTGAAGAGCAACCa
atccttgcctccctccgtcgaccTGTCGGAGCTGCCTGTGGCGATGGGGC
GTGCGTGTGGCCAGGCACAAGGCACCTTAAATTACGCGAAAAGGGTTAGC
TTGATGGGCATCGGCATCAGTCGGCAGCATTGCAGCCTTGTCCAAGGGCC
GGATAACTCCCTGCAAATAGTGGACGAGTCCTCGCAAGGGGTCGCCGTCA
ATGGCGTGCGGATCCCCCCGCAGACGCCTCGGACTTTGAAGGTAGGTGAC
GTTGTCGTCTTGGGGTTGCCCATGGCGCACGATCATCCAGTGGGGGCTCT
CAGCTCCTCAGGATCCGGGAGCATGAGCAAAGGAGGTGCCGTCTTCCGTG
TTGATTGCCTGCCAGCAGACAGGGCCCGTGACTCTCCGGCCGTCAGAGAA
AGCGACGCCTTGAACGCGGAAGAgacttctccctcttcgataTCTGCCAC
TTCAACTTGGACTGACACACCAGCAGTGTGCACCATGTCGTCAGCCGATG
CAGCATCTGCACACCAGGGGGGCGCTTGCAATAAGCCTGGCAGGCAGGGA
GACGGCGCAGCGTCACTGGACGTAGCTAACGAAAGCGAGCACCtcgaaag
aggggagaggagtcAAGTAGAGGCCGAGAGTACTGCGAAGGAAGCGGGTG
GCGAACATGAGGGCGTGGCCCAGGAGAGCGACAGGAACAGCGATGTGGAG
ATTGTGGAGGTCCGGTCGGCCGCGACCGTCCCTCCAAGGGGCGCGCGGAA
ACGAAGGCGGCCGGTCCAGGTCGTCTCGCTActggacgacgacgacgagg
atgaggctGAAACGATCATCGGTGCCCTGGACGctggggccgggaggggc
tGGCAGGAAAGTCAGATGACGCGGTCGGCGGGTGTGTGTAGGGCCGCTGC
TTgcgccgaggagaaggagtaCAAGCGGCGGTGGTTGAAAGCCTTGGAGT
GCCCCGTCTGCATGGAACCTCTATGTGCTGCGGCCCACATGTCTTGTGGA
CACATAGCTTGCTTCACATGCATCCATCGACGCTTTGCGCTGCAGAGCGT
GGAAGACGGCAGCGCATATGGCTTCCAGGACCGAAAACGATTGTGCCCGG
TCTGCCGTAAAGCCGTCTTCTTCATGAGCCGGGACGTGAAGATGGACGAG
CTGGTGGACGAATCGATGAGCAACCATGCGGATAGAATGACAACCGCGGA
GCGCGCagtgtgggagaggagaaagcgtgATGGGTTGGCTTTGAGCCAAT
TTTATGAAAGGAAAATTCACAATAATCCGCAGAATCTCGTTCATCGCCGG
AGAGAGATAGGTGTCAAAGTCTCGATCAAGACGGTCACGGCGTCGGGGTC
TAGGAGGGGAGATATGAGTACACTCTGCTCTGAATGTCGACAGGCTATCG
GAGGTCCGAGCGGGCGCTACATTGCAGTGTGGAAGCTCACCCCGACGCAG
GGCTTCCGGCCCGTGCCCTGTGTGGCAAGTGTGCACCTGGAGTGCTTGAA
ATCCTCCACCTGCAAGGCGATCAGGGCTGGTCTGTCACCTGACGGCATTT
TGTCTTTGCTCTATCGACTGGATGTGCTTGGTCTGCTTGCCGACGAAGAG
AATGGGATAGAGGGCTTCAGGAAGAAGGTCTTTCAGGCCTTGAGCGAGGA
ACGCCAGGAATACCCTTGGTGGGTTGACGGAGCTGTAAGGCTTCAAATAT
GCGGCCAGGACATCCGTGGATAGAGTCATCATGTAAATAATGCCGATCTA
AACAGTTTTAATCCTTCTAGCATGATACTCCTCGAATCGCCTTCTTTGAC
CGTTATCGCCAGAGACCGTATTCCAATGTTTTCTCGAGAAGCCCTGCGCA
GCAGCTCTTAACGAGAGCGGAGGAACGACTGAGGGAGCCATTTCTCGAGC
GTCCCCCCTCTGGACATGACAGACAATCGAATCAGAAGCTATAGGATAGA
GCATATTGAATGCGAAGAATTTTACCGGTGTACATAGCCGGTACCTCCTT
CTTAAAACTTaagttttaaaaaaatgttcTTTGAAAGCTTTTCCCACAAG
ACATCACATATTTATGCATGCTCTTCCTCTCACTCACGTGTACCTCATTT
GTCCTGCTGAGTGCGCAATCTTCGTATGGATTTTCCTCGTTTCCATTACT
CGATGACAGCTCTCACAAAAAAAAACTACGCTGTCTTCGCTTTGGACTCT
AAtgggccgtggccgtggtCCCCGCCGCTCTGAAAGATCTTGATGCAGAG
GCCCAGGAATACAGAAAACACTCCCATCCACTGCCACCAGTGCACTGTAT
GCTTGTAAATGACGATACTAATGAAAAGTGTTATTATTTTCCGGGTTATT
GTGACGGTGACACAGGTCAGACTCCCGAATTCGTCAATGATACTGTATAT
GAAGACCTGGCCGAGGGCGTTGGAGAAACTGAAGGTAAGAATGTCCGTGA
TGATGGCCGGGTAGGCAGTCAAAAAATGGATTGTGTAGGCCAATTGTGAG
CCCTGATTGCGCCAAATCAGGTCCAGAAGAAGGAAGCTTAATGCGAAGCA
AAGGGACCAAGTATTGACCATGGCCATCATGTAGTACGGAGAGACGCGAT
GTTTCTTGTTGATGCGATCTTGCTCCGCATTAGTGAATCCATCGATGAGT
AGATTAATTATAGCCATACAGAGGCCACGCAGCTCCTGCAGAGAAAAACT
GGAATAAACCATTCCTCCTAGGGCCTGAATTATCATCCATAAATTGTCCC
GCGCGATCGCGTCCCCAAGACTGGAACGTCTTGGGTGGCTTGCAGTGCGT
ATGGACTTGCTCCAGCCAGAATCGTGACCAACGTCCGCATCGCTTACTTC
AGGACCTTTGAACATAAAAAGCATGACTCCGCATGAAATCAGAGCGACAG
CAGCATATTCGTGAGGCTTATATCGAACGCCGTTCACAAGCGCGCCGACT
AACATGACAGGTAAAAGCTTGCAATTTTTGACGAGAATAAGAAGAGGATA
GCTTATGTCTCGCAACGACAAGTACCCTATTGGCGAGGCAAGAGTATTAG
AGAGCGCAGGGCGCCAGAAAATTGAGAATGGTGCCGTGGTGCCTTTGTTG
ACCTGGTGCAGAAGCACGCCGACTATAGTCGCTGCAGCGGCCATGAAGGC
ATTAAGAGTGATCATGGCATTAAAAATGCCTGGTTTTTCTTGGCGTCCGG
CAGCAGATTTATatgcggtggtggtgacTTTCTCCTGCACAAAGCCCCAA
TAAATGAAACAAACATA back to topCoding sequence (CDS) from alignment at KK037250.1:197394..201160+ >rna8799 ID=rna8799|Name=rna8799|organism=Nannochloropsis gaditana|type=CDS|length=1848bp|location=Sequence derived from alignment at KK037250.1:197394..201160+ (Nannochloropsis gaditana)
ATGGAAAATGACTTCGGCAAACGCAGTCTGGATGGACCTGCGCCTGTGAC
AAACTCCGCCATAACAGCCCATCCTTTACGATTTTGTCTCACCTTGTTGG
CAGAGGAATGCTTGAAGAGCAACCaatccttgcctccctccgtcgaccTG
TCGGAGCTGCCTGTGGCGATGGGGCGTGCGTGTGGCCAGGCACAAGGCAC
CTTAAATTACGCGAAAAGGGTTAGCTTGATGGGCATCGGCATCAGTCGGC
AGCATTGCAGCCTTGTCCAAGGGCCGGATAACTCCCTGCAAATAGTGGAC
GAGTCCTCGCAAGGGGTCGCCGTCAATGGCGTGCGGATCCCCCCGCAGAC
GCCTCGGACTTTGAAGGTAGGTGACGTTGTCGTCTTGGGGTTGCCCATGG
CGCACGATCATCCAGTGGGGGCTCTCAGCTCCTCAGGATCCGGGAGCATG
AGCAAAGGAGGTGCCGTCTTCCGTGTTGATTGCCTGCCAGCAGACAGGGC
CCGTGACTCTCCGGCCGTCAGAGAAAGCGACGCCTTGAACGCGGAAGAga
cttctccctcttcgataTCTGCCACTTCAACTTGGACTGACACACCAGCA
GTGTGCACCATGTCGTCAGCCGATGCAGCATCTGCACACCAGGGGGGCGC
TTGCAATAAGCCTGGCAGGCAGGGAGACGGCGCAGCGTCACTGGACGTAG
CTAACGAAAGCGAGCACCtcgaaagaggggagaggagtcAAGTAGAGGCC
GAGAGTACTGCGAAGGAAGCGGGTGGCGAACATGAGGGCGTGGCCCAGGA
GAGCGACAGGAACAGCGATGTGGAGATTGTGGAGGTCCGGTCGGCCGCGA
CCGTCCCTCCAAGGGGCGCGCGGAAACGAAGGCGGCCGGTCCAGGTCGTC
TCGCTActggacgacgacgacgaggatgaggctGAAACGATCATCGGTGC
CCTGGACGctggggccgggaggggctGGCAGGAAAGTCAGATGACGCGGT
CGGCGGGTGTGTGTAGGGCCGCTGCTTgcgccgaggagaaggagtaCAAG
CGGCGGTGGTTGAAAGCCTTGGAGTGCCCCGTCTGCATGGAACCTCTATG
TGCTGCGGCCCACATGTCTTGTGGACACATAGCTTGCTTCACATGCATCC
ATCGACGCTTTGCGCTGCAGAGCGTGGAAGACGGCAGCGCATATGGCTTC
CAGGACCGAAAACGATTGTGCCCGGTCTGCCGTAAAGCCGTCTTCTTCAT
GAGCCGGGACGTGAAGATGGACGAGCTGGTGGACGAATCGATGAGCAACC
ATGCGGATAGAATGACAACCGCGGAGCGCGCagtgtgggagaggagaaag
cgtgATGGGTTGGCTTTGAGCCAATTTTATGAAAGGAAAATTCACAATAA
TCCGCAGAATCTCGTTCATCGCCGGAGAGAGATAGGTGTCAAAGTCTCGA
TCAAGACGGTCACGGCGTCGGGGTCTAGGAGGGGAGATATGAGTACACTC
TGCTCTGAATGTCGACAGGCTATCGGAGGTCCGAGCGGGCGCTACATTGC
AGTGTGGAAGCTCACCCCGACGCAGGGCTTCCGGCCCGTGCCCTGTGTGG
CAAGTGTGCACCTGGAGTGCTTGAAATCCTCCACCTGCAAGGCGATCAGG
GCTGGTCTGTCACCTGACGGCATTTTGTCTTTGCTCTATCGACTGGATGT
GCTTGGTCTGCTTGCCGACGAAGAGAATGGGATAGAGGGCTTCAGGAAGA
AGGTCTTTCAGGCCTTGAGCGAGGAACGCCAGGAATACCCTTGGTGGGTT
GACGGAGCTGTAAGGCTTCAAATATGCGGCCAGGACATCCGTGGATAG back to top
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