EWM21926.1, cds8769 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21926.1 vs. NCBI_GenBank
Match: gi|585102272|gb|EWM21926.1| (putative zinc ring finger protein [Nannochloropsis gaditana]) HSP 1 Score: 1262.67 bits (3266), Expect = 0.000e+0 Identity = 615/615 (100.00%), Postives = 615/615 (100.00%), Query Frame = 0
Query: 1 MENDFGKRSLDGPAPVTNSAITAHPLRFCLTLLAEECLKSNQSLPPSVDLSELPVAMGRACGQAQGTLNYAKRVSLMGIGISRQHCSLVQGPDNSLQIVDESSQGVAVNGVRIPPQTPRTLKVGDVVVLGLPMAHDHPVGALSSSGSGSMSKGGAVFRVDCLPADRARDSPAVRESDALNAEETSPSSISATSTWTDTPAVCTMSSADAASAHQGGACNKPGRQGDGAASLDVANESEHLERGERSQVEAESTAKEAGGEHEGVAQESDRNSDVEIVEVRSAATVPPRGARKRRRPVQVVSLLDDDDEDEAETIIGALDAGAGRGWQESQMTRSAGVCRAAACAEEKEYKRRWLKALECPVCMEPLCAAAHMSCGHIACFTCIHRRFALQSVEDGSAYGFQDRKRLCPVCRKAVFFMSRDVKMDELVDESMSNHADRMTTAERAVWERRKRDGLALSQFYERKIHNNPQNLVHRRREIGVKVSIKTVTASGSRRGDMSTLCSECRQAIGGPSGRYIAVWKLTPTQGFRPVPCVASVHLECLKSSTCKAIRAGLSPDGILSLLYRLDVLGLLADEENGIEGFRKKVFQALSEERQEYPWWVDGAVRLQICGQDIRG 615
MENDFGKRSLDGPAPVTNSAITAHPLRFCLTLLAEECLKSNQSLPPSVDLSELPVAMGRACGQAQGTLNYAKRVSLMGIGISRQHCSLVQGPDNSLQIVDESSQGVAVNGVRIPPQTPRTLKVGDVVVLGLPMAHDHPVGALSSSGSGSMSKGGAVFRVDCLPADRARDSPAVRESDALNAEETSPSSISATSTWTDTPAVCTMSSADAASAHQGGACNKPGRQGDGAASLDVANESEHLERGERSQVEAESTAKEAGGEHEGVAQESDRNSDVEIVEVRSAATVPPRGARKRRRPVQVVSLLDDDDEDEAETIIGALDAGAGRGWQESQMTRSAGVCRAAACAEEKEYKRRWLKALECPVCMEPLCAAAHMSCGHIACFTCIHRRFALQSVEDGSAYGFQDRKRLCPVCRKAVFFMSRDVKMDELVDESMSNHADRMTTAERAVWERRKRDGLALSQFYERKIHNNPQNLVHRRREIGVKVSIKTVTASGSRRGDMSTLCSECRQAIGGPSGRYIAVWKLTPTQGFRPVPCVASVHLECLKSSTCKAIRAGLSPDGILSLLYRLDVLGLLADEENGIEGFRKKVFQALSEERQEYPWWVDGAVRLQICGQDIRG
Sbjct: 1 MENDFGKRSLDGPAPVTNSAITAHPLRFCLTLLAEECLKSNQSLPPSVDLSELPVAMGRACGQAQGTLNYAKRVSLMGIGISRQHCSLVQGPDNSLQIVDESSQGVAVNGVRIPPQTPRTLKVGDVVVLGLPMAHDHPVGALSSSGSGSMSKGGAVFRVDCLPADRARDSPAVRESDALNAEETSPSSISATSTWTDTPAVCTMSSADAASAHQGGACNKPGRQGDGAASLDVANESEHLERGERSQVEAESTAKEAGGEHEGVAQESDRNSDVEIVEVRSAATVPPRGARKRRRPVQVVSLLDDDDEDEAETIIGALDAGAGRGWQESQMTRSAGVCRAAACAEEKEYKRRWLKALECPVCMEPLCAAAHMSCGHIACFTCIHRRFALQSVEDGSAYGFQDRKRLCPVCRKAVFFMSRDVKMDELVDESMSNHADRMTTAERAVWERRKRDGLALSQFYERKIHNNPQNLVHRRREIGVKVSIKTVTASGSRRGDMSTLCSECRQAIGGPSGRYIAVWKLTPTQGFRPVPCVASVHLECLKSSTCKAIRAGLSPDGILSLLYRLDVLGLLADEENGIEGFRKKVFQALSEERQEYPWWVDGAVRLQICGQDIRG 615
BLAST of EWM21926.1 vs. NCBI_GenBank
Match: gi|525586204|gb|EPS32454.1| (hypothetical protein PDE_07414 [Penicillium oxalicum 114-2]) HSP 1 Score: 61.2326 bits (147), Expect = 4.542e-7 Identity = 46/139 (33.09%), Postives = 60/139 (43.17%), Query Frame = 0
Query: 287 PRGARKRRR-----------PVQVVSLLDDDDEDEAETIIGALDAGAGRGWQESQMTRSAGVCRAAACAEEKEYKRRWLKALECPVCMEPLCAAAHMSCGHIACFTCIHRRFALQSVEDGSAYGFQDRKRLCPVCRKAV 414
PRG +++RR P +V S ++ D E E A A + Q A +E + R L A +CPVCM+ L A SCGH+ C CI LQSVED + K CPVCRK +
Sbjct: 45 PRGTKRKRRNGEDVPARSEAPNEVQSPIEAIDLTEVEDSSSLAQALAKQRQDAIQ----------AQATDESDKSRSLLAAYQCPVCMDNLEDATSTSCGHLFCHKCIVD--YLQSVEDRRVDHTKQSKGTCPVCRKTI 171 The following BLAST results are available for this feature:
BLAST of EWM21926.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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