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Properties
| Property Name | Value |
|---|
| Product | integral membrane protein |
| Orig transcript id | gnl|cribi|Naga_100070g20.4220.mrna |
| Orig protein id | gnl|cribi|Naga_100070g20.4220 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:175873..176385 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8794 ID=rna8794|Name=rna8794|organism=Nannochloropsis gaditana|type=mRNA|length=2608bp
AAACAAAAGGTCGAATCAGTAAAGGTTGGCCGTTCAACCTCCCGGCTACT
AGTCCTCCTACTGAGATCTAGTAGATCTCAGCTGTGACACAGTCAATCGT
TGGTTCTAAGTCGCGGTGGTAAGAGGCTTCTGACACAAATCAATTAAAAG
CATCAAAGCACAATCTTGTCATGTCCGGGGAGGCTCACAATTTATGTCGA
TAGAGGGAGCATATTTCTTACAAACGGGTTAGGTGTCTCGGCCGCGAGAC
GTGCTCGCCTCTGTCTAGCTAGCTGGGTAGCCTGCAGGCTCGGCTTCGAT
CTGGTCGGGCATGCCAGCTAGTTGGTCGACAGTTGAGACGTTGTTCACGA
GATTAAGCAACCTTGCTCGATCACTTAAAAATACATGTCAGGATCGCGGG
GCAGGGCACCAGCGACCACTCGCTCTGTGCGTGAGGCGTAATGGCGGAGG
AAGTAGGCGCAGGAGGTGGAGGGGAAGACTCTTTGGCGGCCCGGGAGTTG
GAGAGTGCCAAGAACTCTCCGGCACTCGAGGAAGAGCATCGACAAGTGAC
CAAAGGCAAGGTGCGGACGCGTTTTCCTCCGGAACCGAATGGATATCTGC
ACATCGGGCATGCCAAATCCATGCATATGAACTTCCACCTCGCCTTTGAG
AAGTTGGGAGTTCCTGAAGATATGCGAGAGACTGTGTTTCGATACGATGA
TACAAATCCTGAGGCAGAGAGTCAAGAGTACATTGACTCACTACGGGAAG
ATGTGGAATGGTTGGGATGGACGCCTGCGCAGACTACTTTCACTTCGGAC
TACTTCGACCAGTTGTACGATCTGGCTGTACGTCTCATTCGGGCGGACAA
GGCGTACGTGTGCCATCAAACGGGAGAGCAGATAAGCAAATCACGCAGCA
TAGCGAAAGAAAAGGCAGTGAATCCCCACTTTGAGGGAGACCCCAACAGT
CCTTGGCGAGATAGGCCTATCGAGGAATCACTACGGTTATTTGAAGACAT
GCGGCTCGGAAAGTTCAAGGAGAACGAAGCAACGCTCAGAATGAAGATGG
ACATGAGCTCGCCCAATTTTAACATGTATGATCAGGTGGCCTATCGGATC
AAGTTCATCCCACATCCGCACGCGGGGGATACGTGGGTCGTCTATCCAAC
ATATGACTTCACGCACTGTATAATTGATTCTTTGGAGCATATCGATTATT
CTATTTGCACGTTGGAGTTTGAGACGCGCCGTGAATCATACTACTGGGTA
CTGGAGGCTTTGGATCTGTACCGGCCCAAGGTATATGAATTTTCGCGCCT
AAACATAACTTACACTGTACTTTCCAAGCGGAAGCTGTTGAAGCTAGTGA
AGGCGAAATGGGTAGCCGGTTGGGATGACCCTCGGATGCCCACCATCAAA
GGTCTTCGTCGCCGCGGTTACACGGCGGATATACTTAATGCCTTTTGCAA
AGATATCGGTGTGACGAGAAATGAGAACATCATCCAATACGAGCGCCTGC
AGCACTGGGCTCGAACTATCCTCAACGAAACTGCCAAGCGGGCTATGGGC
GTTCAAGACCCTATTTTGGTCACTATCAGTAACCTCGAGGAACCGGTAAA
GCTAGAATCTCCTGACTTTCCCTTTGCACCTGAGCGAGGGTCACACTCTA
TCGTTCTTACGCCCAAAATATACATCGATGCCTCAGACTTTCGAGAAGAC
GACTCAAAAGACTATTTCGGACTTGCCCCAGGCAAAAGTGCGATTTTGAA
GTACGCTTTCCCCGTGTGTGTGAATGAGGTGCTATATAATGATACTGGTG
ATGTGGTGGAGCTCAAAGTTACTGCAGATAAGGATGGATCCAGCCCCAAG
CCCAAGGGAGCCATCACATGGGTCTCGGCTGTGCCAGACAATGTTGTTTC
TGCTGAGTTTCGGCTGTACAATCATCTCTTCACTGTGGAATGTCCTGGGG
TTGACACTTGGGAAGCGGAATTGAATCCGTTGTCTTTGGAGGTCAAAGCC
CAGGGCCTCATCGACACGTCCGTCCTGACGGTCAATGGCCAGCTCCCTTC
CGTCTTTACAACATTTCAACTTGAGCGGGTAGGCTATTTCACCGTTGATC
CCGACACGACGTCAGCAAAACTCGTCCTAAATAGGGTGGTGACGCTTAAG
GAGTCCAGTGTTAAAAAAGACGTGTCCACAGGAGCCGATGGCAAGGGAAG
AAGTCGGAAGGAGGAGCAAGCCCGTCAACTTCTGGAGAAAGAGGCGAGAA
AGAATTTAGATCCGAAAGATATGTTTCAGGCTGAGACGGACAAGTACAGC
GCCTTTGATGAGGATGGCATTCCCACGAAAGATGTAGAGGGTATATTGCT
CTCAAAAAGTCTTGTGAAGAAACTGAAAAAAGAATGGGAAAAGCAAAAAC
GTCTGTTTGACAGCAACAGGAAATAGGACACATGGTTCAGTAGCATTCAG
AAAAATGTCTGGCAAGAGATTTTGGATTATGAAAGAGGTATCTCTTAAAA
AAAAGTCACGTCCGCGCGATGAGAAAACAAATTTTGTAGTCTGCGTCTCA
GGCGTCTTGTTGCTCTACAATTCCTGTACGATATTCACAAAATAGCTTGA
ACGTGGGG back to topprotein sequence of rna8794 >rna8794-protein ID=rna8794-protein|Name=rna8794|organism=Nannochloropsis gaditana|type=polypeptide|length=170bp
MRLVILCHGIIFTLLAFVGLPAQAFIPPKGLPRSSYHQLAPPAPRIASSS
LRMTIDPSSIPLAENTGTVLLLAASSWVSPAKAVIEPLLDLGGVAFLVRI
VLSWYPQVDLNKLPANLIAWPTEPFLSVTRLVVPPAFGVDISPIIWFAFL
NFLREILVSDQGILTLLQQK back to topmRNA from alignment at KK037250.1:175873..176385+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8794 ID=rna8794|Name=rna8794|organism=Nannochloropsis gaditana|type=mRNA|length=513bp|location=Sequence derived from alignment at KK037250.1:175873..176385+ (Nannochloropsis gaditana)
ATGCGTCTAGTAATCCTCTGCCATGGCATCATCTTCACCTTGCTGGCATT
TGTCGGCCTTCCGGCTCAAGCTTTCATTCCTCCAAAAGGTCTGCCTCGTT
CCTCTTATCATCAATTAGCACCACCTGCGCCGCGCATTGCTAGCTCCTCT
TTGCGCATGACGATAGATCCATCAAGCATACCATTAGCTGAAAATACAGG
GACAGTATTACTGCTCGCAGCGAGCAGCTGGGTCTCCCCCGCAAAGGCTG
TAATTGAGCCCCTTTTAGACCTTGGCGGTGTCGCGTTCTTGGTTCGGATC
GTCCTGTCATGGTACCCACAGGTGGATTTAAATAAATTACCAGCGAATCT
GATTGCCTGGCCAACTGAGCCCTTCCTTAGTGTTACTCGTCTCGTTGTAC
CTCCTGCCTTCGGTGTGGACATCAGCCCCATCATTTGGTTTGCCTTCCTA
AATTTTTTGCGAGAAATTTTGGTCAGTGATCAAGGCATCCTCACCCTTCT
GCAACAAAAATAA back to topCoding sequence (CDS) from alignment at KK037250.1:175873..176385+ >rna8794 ID=rna8794|Name=rna8794|organism=Nannochloropsis gaditana|type=CDS|length=513bp|location=Sequence derived from alignment at KK037250.1:175873..176385+ (Nannochloropsis gaditana)
ATGCGTCTAGTAATCCTCTGCCATGGCATCATCTTCACCTTGCTGGCATT
TGTCGGCCTTCCGGCTCAAGCTTTCATTCCTCCAAAAGGTCTGCCTCGTT
CCTCTTATCATCAATTAGCACCACCTGCGCCGCGCATTGCTAGCTCCTCT
TTGCGCATGACGATAGATCCATCAAGCATACCATTAGCTGAAAATACAGG
GACAGTATTACTGCTCGCAGCGAGCAGCTGGGTCTCCCCCGCAAAGGCTG
TAATTGAGCCCCTTTTAGACCTTGGCGGTGTCGCGTTCTTGGTTCGGATC
GTCCTGTCATGGTACCCACAGGTGGATTTAAATAAATTACCAGCGAATCT
GATTGCCTGGCCAACTGAGCCCTTCCTTAGTGTTACTCGTCTCGTTGTAC
CTCCTGCCTTCGGTGTGGACATCAGCCCCATCATTTGGTTTGCCTTCCTA
AATTTTTTGCGAGAAATTTTGGTCAGTGATCAAGGCATCCTCACCCTTCT
GCAACAAAAATAA back to top
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