rna879, rna879 (mRNA) Nannochloropsis gaditana

Overview
Namerna879
Unique Namerna879
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1326
Alignment locationCM002456.1:629277..630281 -

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Properties
Property NameValue
Productgualynate kinase-1
Orig transcript idgnl|cribi|Naga_100017g71.302.mrna
Orig protein idgnl|cribi|Naga_100017g71.302
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:629277..630281 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100017g71gene842Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29804.1cds879Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna879rna879-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna879 ID=rna879|Name=rna879|organism=Nannochloropsis gaditana|type=mRNA|length=1326bp
ATGGCGCCAGCTTCTCCGTGTATGCTTAAGTGGCTGGCCACGGGCCTCCC
TCATGCAACGACCGAGCACAAGGTGCACTGGGAGGATGAGGAGCATTTCG
TGCTGCGCGCAGACGGAGACATAATTAAGGAGCCTAATACTGTCGCGCGT
GCGATAGCGAAAGCAGTAACTCCTGAGCTTACGGGTGTGCTACCAGTCGA
GCAGGGGCAGGTGGTGCAATGGCAGTCCTGGGCCTCGGAGACTGAAGACA
TCCTAGGTCGAGCTGTCGAACTCAATACTTTCCTGGAAGGCCGTTCCTTC
TTGGTGGGTGCGGCGCCTACATTAGCTGACATCCAAATGTACTGGGCCCT
TGCAAAAGTTGTGGCGCTTTCCTTCCCCGGACCGCTGGGAGGGTCGGTGG
CTCTGATGCGCTGGTTTGACCAGATCCAGAACTGCCTGCGCGTAGGAGCT
TTTGCCATGTCGTACGACGTGACGCATTTGCCCCAACTTGTTCCAATGCA
TTCCATTTTCAAACCTGTGGCGATGCCTGTGTACGATAGAAGCAAAGGTC
AAGAAAGAGTGGGCGCAGCAGCGAGCGCGCATGAGGGCGGAGGCACCGCG
TCGGTAGAAAGCAAGGGGGAGGCGGCGGCGAAAGCGAAGGGAGCGAGGCA
GAGAGACGGGGAGACTGGCGAGAAAGCGGCAAGCAGCGATGGGATAGGAA
ATCATCACGCACAAAGCCAGGGGAAAAAGTCGAAGAAGAAGGAGGAGCCA
GCCCCTGCGACCGAGACCCTAGGAAAGGGCGAGACGGCGCCCACGGAGAA
CCCCAATGCCCTGGACATCCGGGTAGGAAGGTTGGTGAAAGTCTGGCCTC
ACCCGGAGGCCGAAAAGCTTTATTGCGAGGAGATCGATTGTGGCGAAGAA
AGCGGGCCCAGGCAGATCGCTTCGGGGCTCCGGCAATTTTACAGCGCTGC
CTCCGAGCTTGAGGGTCGAATGGTGCTAGTGCTCGCAAATTTGAAGCCAA
GGAAACTCGTGGGCTTTGCCTCAAATGGCATGGTCCTCTGCGCCTCGGAT
ACTGAGCATACACAAGTGAAATTGGTGGAACCGCCCGCCCATGCCAAGGT
GGGGGACCGCGTCGTCTTCCCCGGTTTCTCCACCGAGTCGATGCCCCTGA
CGCCAGCCCAGGTACAGAAAAAGAAAGTCTTTGAAGCCTTGGCCGCCGGT
TTGAAAACCGATTCCCAGGGCAGGTGCATCTTCAAAGACGAGACCCATCC
CTTCTGGAAATGTCTTTTTCGCGGGAAAATGAGCAAGTGCATGATGGTTT
GTGGTTCTGATTCCCAAGCCACTTGA
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protein sequence of rna879

>rna879-protein ID=rna879-protein|Name=rna879|organism=Nannochloropsis gaditana|type=polypeptide|length=334bp
MHFISLCSYRQVAAGGRMGYSSLSFFPVAYVERHRRPAPFRVLYTACLIV
LKAYHTSALNNFSASNPPFSSGFACLSSSSKDVSPSSPPRLTRRNFMTHG
GSGSEHGTASSSMASSASSSSLDQPVDRMAVRRPLIITGPSGVGKGTLIR
RLLGEYPLRFGFSCSHTTRGPRPGEKEGVDYFFTTRERLQAEIDEGKFLE
HATVHNNLYGTSFEAIQKVQEEGKICILDIDVQGVISVKGALARGALHDL
RPLYVFISPPSLAVLESRLRGRETEKEEDVLRRLKNAKREVEYGVAPGNF
DKVVVNADLDDAYIDLRTYIETMYYGDEEVQSSS
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mRNA from alignment at CM002456.1:629277..630281-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna879 ID=rna879|Name=rna879|organism=Nannochloropsis gaditana|type=mRNA|length=1005bp|location=Sequence derived from alignment at CM002456.1:629277..630281- (Nannochloropsis gaditana)
ATGCACTTTATATCACTCTGTTCCTACAGGCAAGTCGCCGCAGGCGGTCG
CATGGGGTATTCGTCCTTGTCGTTTTTTCCAGTTGCTTACGTTGAACGTC
ATCGACGACCCGCACCTTTTCGCGTGCTCTATACTGCGTGCCTTATTGTC
CTGAAGGCCTACCATACGAGTGCGTTGAACAATTTTTCCGCCTCAAACCC
TCCGTTTTCTTCTGGTTTCGCGTGCCTGAGTAGTAGCAGTAAAGACGTCT
CCCCCTCCTCCCCCCCGCGTCTCACACGCCGAAACTTCATGACGCACGGT
GGCAGCGGCAGTGAGCATGGCACTGCGAGCAGCAGCATGGCTAGTAGCGC
GAGTTCGAGCAGTCTGGACCAGCCAGTAGACAGGATGGCAGTGCGTCGAC
CGCTTATTATAACCGGGCCCTCGGGCGTGGGGAAGGGCACCCTGATCCGC
CGCTTGCTGGGGGAGTATCCTTTGCGCTTTGGATTCTCCTGCAGCCATAC
TACTAGAGGTCCCCGCCCGGGAGAGAAGGAGGGGGTGGACTATTTCTTCA
CGACTCGCGAGCGGCTACAGGCTGAGATTGATGAGGGCAAATTTTTGGAG
CACGCGACGGTACACAATAATCTGTATGGCACAAGTTTTGAAGCCATCCA
AAAAGTTCAGGAGGAAGGAAAAATTTGTATATTGGATATCGACGTACAAG
GAGTAATTTCTGTGAAAGGCGCGTTGGCGCGAGGCGCGCTCCATGATTTG
CGGCCCCTGTATGTGTTTATATCTCCCCCATCCTTGGCGGTGTTGGAATC
GCGATTACGGGGGCGCGAGACAGAGAAAGAAGAAGATGTACTCAGGCGTC
TAAAGAATGCCAAGAGAGAGGTGGAATATGGAGTGGCACCGGGAAACTTT
GACAAGGTGGTAGTGAACGCCGACCTGGACGATGCCTACATAGATCTAAG
GACGTACATCGAGACGATGTACTACGGCGATGAGGAGGTGCAATCCAGCA
GTTGA
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Coding sequence (CDS) from alignment at CM002456.1:629277..630281-

>rna879 ID=rna879|Name=rna879|organism=Nannochloropsis gaditana|type=CDS|length=1005bp|location=Sequence derived from alignment at CM002456.1:629277..630281- (Nannochloropsis gaditana)
ATGCACTTTATATCACTCTGTTCCTACAGGCAAGTCGCCGCAGGCGGTCG
CATGGGGTATTCGTCCTTGTCGTTTTTTCCAGTTGCTTACGTTGAACGTC
ATCGACGACCCGCACCTTTTCGCGTGCTCTATACTGCGTGCCTTATTGTC
CTGAAGGCCTACCATACGAGTGCGTTGAACAATTTTTCCGCCTCAAACCC
TCCGTTTTCTTCTGGTTTCGCGTGCCTGAGTAGTAGCAGTAAAGACGTCT
CCCCCTCCTCCCCCCCGCGTCTCACACGCCGAAACTTCATGACGCACGGT
GGCAGCGGCAGTGAGCATGGCACTGCGAGCAGCAGCATGGCTAGTAGCGC
GAGTTCGAGCAGTCTGGACCAGCCAGTAGACAGGATGGCAGTGCGTCGAC
CGCTTATTATAACCGGGCCCTCGGGCGTGGGGAAGGGCACCCTGATCCGC
CGCTTGCTGGGGGAGTATCCTTTGCGCTTTGGATTCTCCTGCAGCCATAC
TACTAGAGGTCCCCGCCCGGGAGAGAAGGAGGGGGTGGACTATTTCTTCA
CGACTCGCGAGCGGCTACAGGCTGAGATTGATGAGGGCAAATTTTTGGAG
CACGCGACGGTACACAATAATCTGTATGGCACAAGTTTTGAAGCCATCCA
AAAAGTTCAGGAGGAAGGAAAAATTTGTATATTGGATATCGACGTACAAG
GAGTAATTTCTGTGAAAGGCGCGTTGGCGCGAGGCGCGCTCCATGATTTG
CGGCCCCTGTATGTGTTTATATCTCCCCCATCCTTGGCGGTGTTGGAATC
GCGATTACGGGGGCGCGAGACAGAGAAAGAAGAAGATGTACTCAGGCGTC
TAAAGAATGCCAAGAGAGAGGTGGAATATGGAGTGGCACCGGGAAACTTT
GACAAGGTGGTAGTGAACGCCGACCTGGACGATGCCTACATAGATCTAAG
GACGTACATCGAGACGATGTACTACGGCGATGAGGAGGTGCAATCCAGCA
GTTGA
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Synonyms
Publications