rna8776, rna8776 (mRNA) Nannochloropsis gaditana

Overview
Namerna8776
Unique Namerna8776
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2855
Alignment locationKK037250.1:138068..139421 -

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Properties
Property NameValue
Productcullin family
Orig transcript idgnl|cribi|Naga_100070g1.4213.mrna
Orig protein idgnl|cribi|Naga_100070g1.4213
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:138068..139421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100070g1gene8508Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21899.1cds8746Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8776rna8776-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8776 ID=rna8776|Name=rna8776|organism=Nannochloropsis gaditana|type=mRNA|length=2855bp
GAGCACCTGGCCGTGTTGCGCCGCGTGATCGGCTCCTTCGTGGCGCTGGG
CACGACCCTGGAGCCCTCGCACCCTGTGGGCTTCTACAAAGAGCAACTTG
AGGACCATGTCTTGAGGGAAGTCTACCTGCACTACGTGTACAAGGCCGGG
CTTTTTGCGGCGGAGGTGTCAGCGGGGCATGCAGACGAAGCTGCTGTGGC
AAAGTACATCCGAACGGTCGAGGGCTGCGTGGCCGCGGAAAAGGCAATTT
GGGAGCCCGTCTACCCCTCTACCTCGCGAGGGGCTGTGCGTGTGGTCCGA
AAGTCGATGCTGGAGAGCCAGCCGCACCATCAAATCCTTATGGCCTTCGC
CAACGCCGCACTCGCCTTCCATGCAGAGCGGCTCGCAGACTTGGAACTGC
TGTATCGGCTCCTGGACAACGAGGACGTGGAGCCTACGAAAGGCATCGAG
GCACTCCGCAACATCTTCTTCGGTTTCGTCAAGGAGGTGGGGGCTCGGGA
GGTGAAGCGCGCGAACGAGGAGGCCCGTCATCGGCAATCATCGCCGCTGA
GGCCTGACATGTCGCACATGCTCGCTCGCTCCTCACTCCCCCCCGACTAC
GTGTGCTCGGACACGATCCAGACGATGCTGGATCTCTACTCCCATTACCT
GACCCTGGTCCGCGTCACTTTCAAGGACGACTCTCGCTTTGCCAAGGCCT
TCAAGACGGCCTGTGAGCACTTCATCAACGCGCTCCCGAATATGTCTGAG
TCCCTGGCCATACACGCCCACTACTTCCTCGACAAGAACTGTCCTGAGTC
CCGCATGGAAAATGTGGACGTGGCGCTTGACAGCATCGTCCTCCTCTTCA
ACTTCATTCAGGACAAAGACCTTTTCCACCGCTCCTACGCCCGTCTTCTC
GCGGCTCGGATCATCTCCTTCTCCTCGGTCTCGGACGAAGCTGAGCGACG
GATGATGAAACATCTCATGCAAGTTTGCGGCTTCCAGTACGCCATGACGT
TCCAGCGCATGTTTATGGATAAAACTCTTTCCTTTGAGCTCTCTTGCGAG
TTTGCAGAGTGGGAACGCGAGCACCGTGCCCAGCAGCAGCGGCTTCTGCT
CATGCGCCAAAAGCAGCTAGCAGAGGGACGGGGAGTATGTCTGGAAGGGG
GAGACGAGGTGGGAGGGGCAGATGGGGTGACGGGATTGGAAGAAGGAGGA
CGTGGCGGTGCCGGGGGAGCCGGAGGAGCGATTGGCGAGGTGGGGCGAGG
GGGGCACGGCCGCCGGAAGTCGGACTCGGCGATCGAGTTCGTCGAAACAG
AGTCCGGCCACGTTACGCCCAGGTCGGTCAGCCCCAAGCTCAGCCACGGC
ATGCGGTTCATCGGCCTTCATGACTCGAGCCCCTTGCAGGTGCTCCTGTC
CAAGCGGGTCTTCGCGGACAAGGTGAAGAAGTACAAGGAGAGGGGCCTGG
TGTCCACTCCTGCCAGCTCTGCCCTCGCCCCAAAGGGCGACTTGCCTCAT
CCTTCATCCGCGTCGCCTCAAGCGGCAGCACAAGGAGGCGGTGGGACTAT
TGGTACCTATTCCGTGATGTCGGGTCGTACTCCCTCATATCATCGCGGCA
ACACATTTTTCTTCGGTGACGACGACATGAATTCACCGGGAACTGCCGGC
GCCGGAGGGGGAGGCGGCGGAAGCGGCGGTGCTGGCTTTTCGTGGTCGCA
TTCGGTGCTTGACGCACCGAATGCTAAAAAAGGAATACGTCAAACATCGG
GCGCAGGAGGAGAGGCGGAGGTGGAGTTCTTCGTTTTTATCCTGACGGGC
GGATCTTGGCCGTACCCCTCGACAGGACAACTCGTACAGCTGCCAGCCCC
CTTGATGCGTTGCGTAGAGTCCTTCTCCACCTTCTACGATGCCAAGTATA
AGCGGCGACGACTGACTTGGCTGCACGAGCTCGGCCACGGGGAGGTGCTT
TTCCGGTGCCCCGCCAGTGACAGGTCCTACACCTTGCTGGTGTCCACTTC
GCAGATCTGTATCCTGCTCCTTTTCAACTCCCGGTCAGCTTGGAGCGTGG
AAGAACTCCAGCGGGCTCTCGACCTAGACTTGGGCGAGCTTGTTTTGTGT
CTTTACCCCTTGCTGCGGTCGCAAGTCCTTACGTGTAGACCTGAAGTAGC
GGTCGCCTCAAAACTGACCAAGCACCACACCGTTGTGGTAAACGAAGGCC
TGTCTCGCCGTGGCTGCAGACTTGCTGTGCCGCGCAAGTGCGACGAGGCG
GAGCTGCCGTCTGCATTGGATTCTCCTCGCTCCATGGATCCAGCTCGCAT
CTCGCCCACGTTGCTGAATGAGCGTAAGAGCGCAATAGAGGCCCGAGTCG
TGCACTTGATGAAAAAGGCAGGTAGCATGCGGCACGATAAATTGATTGAA
GCAGTGTTGCAGCATACACGCCAAATGAATTTTTTGCCCCCTGTGGATTT
TATATGCGAAGTTATTCGCGCCGACATAGATAAGGATTTCTTGGAGCTTG
CGGAGGACGGGCCCAACCCGCTTTATCGTTATCTAGCCTAGAGCACCACA
TTGAAGTAGAAAATATCTTGGCAAATGTACATCGACAATGAAGTGGCGGT
GGGGTGAAAGATGATGAGCACTCAAATTGCAATTAATTGCAGTAACATAG
AGTCTCTGAGTAATGCTTGTTACAAAGAATCGGATCGCGGGGTAGAACAT
TCTAGCTTCGAAATGTACACAAGATTGAAAGATCTTTGACGGGACAAACA
AAAAGTAGAAAAATCGAGAATTTTCACAAATAGTCGTCTATGTTTGAAAT
GCTCAATCCCCAACATCTCAGTACATCGCTCATCAGAGCATTAGTTCCAA
TTATC
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protein sequence of rna8776

>rna8776-protein ID=rna8776-protein|Name=rna8776|organism=Nannochloropsis gaditana|type=polypeptide|length=244bp
MKTFIRRLSSRGEDAASSLASTTSASSLAESQRNPPHGGGVSGSRVSLGM
ASKAVDFSAAWSRIHATLDGLTSGEGLPAAEASWLALYTDVYRICTSPPV
GGLGGPPAAAGAGIAGSGGGVHRRLYDHLHDFLHQHCDAVVVRLLTAAES
HTAFQFLTLYADFYTLYTKGMETGGKLLAYLDRFWITKHHHKKGIDPSQG
VMFIAELVPLVWRQRVLRRDISNLLQRAFNAVVADLRACPAPPP
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mRNA from alignment at KK037250.1:138068..139421-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8776 ID=rna8776|Name=rna8776|organism=Nannochloropsis gaditana|type=mRNA|length=1354bp|location=Sequence derived from alignment at KK037250.1:138068..139421- (Nannochloropsis gaditana)
GTGCATCGGCAGCGTCCTGTTCTGAATCGCAGTGTCCGAGTGGCAACAAG
GGCGTCATGGGCTCAATATCTTTGGCTCGTAGCCTCTGAGAGGACGGACC
TAGGAGAGGGATGGCGTGGGACAGAGCCCTTCCTCCAGGGGCGTCTTTTT
CTTGGCAAGTGAAGTCCACAATCCCGATCCCCCGTACATCCGCGCTATTT
GATTATGCCTCACGTTGTTCATGGGCGAGGCCATCGTCACTATCATGACT
AAATGCTCAAGAAAGCAGACGAAGCGCGTGCGTCCTCGTGACGGAGCTCA
GCATTGATGGGTCGTGTCTGGCGAGGGACTTTCCATGGGCACATGTCTTG
CCTGGCCGCGTCTTTAATGCTCCACAGTTGTAATGATTGATTCCACGCGC
GAAACTATGCTATCATTGTCCTCCTTTCGGGGAGCGTGCGGAATGGAAAA
GGATGCTCATATTTCTCGGTCTAACACTGTATTCTAAATTTTAGGGAAAT
TTTTCGTAGCTGGAGGTAAGACTACAATCTGGTCGGTCGTACTATCCACT
TAGGACATCATAAGAGTTGCAGGGTCCTGTCGAAGGCCAGCCCTGTCGCG
TGACACATAAAGGTGGAGGGCATGAAGACCTTCATCCGCCGGCTTTCGTC
GCGAGGCGAGGACGCGGCCTCGTCCCTCGCCTCCACTACGAGCGCTTCGA
GCTTGGCCGAGTCGCAGCGGAACCCTCCGCATGGGGGCGGAGTGAGCGGG
AGTCGGGTGAGCCTTGGCATGGCTTCGAAGGCTGTTGATTTCTCAGCGGC
TTGGAGCCGCATTCACGCGACCTTGGACGGGTTGACTTCGGGGGAAGGCC
TGCCGGCGGCAGAGGCCTCGTGGCTGGCCCTCTACACGGACGTCTACCGC
ATTTGCACCAGTCCACCTGTTGGGGGACTCGGCGGGCCTCCTGCGGCAGC
AGGGGCGGGGATAGCAGGCAGTGGGGGAGGGGTTCATCGGCGACTGTACG
ACCACTTGCACGACTTCTTGCATCAGCATTGCGATGCAGTGGTGGTGCGT
CTTCTCACGGCGGCCGAGTCTCACACGGCCTTCCAGTTTTTGACATTGTA
TGCAGATTTTTACACATTATATACGAAGGGGATGGAGACCGGCGGGAAAT
TGCTGGCCTACCTGGACCGGTTCTGGATCACCAAGCACCACCACAAGAAG
GGCATCGACCCCTCCCAAGGCGTCATGTTTATCGCCGAGCTCGTCCCGCT
CGTCTGGCGACAGCGTGTTCTCCGACGCGACATTTCAAACTTGCTGCAGC
GGGCCTTCAACGCCGTTGTGGCTGATCTGCGTGCCTGCCCCGCCCCCCCC
CCCC
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Coding sequence (CDS) from alignment at KK037250.1:138068..139421-

>rna8776 ID=rna8776|Name=rna8776|organism=Nannochloropsis gaditana|type=CDS|length=733bp|location=Sequence derived from alignment at KK037250.1:138068..139421- (Nannochloropsis gaditana)
ATGAAGACCTTCATCCGCCGGCTTTCGTCGCGAGGCGAGGACGCGGCCTC
GTCCCTCGCCTCCACTACGAGCGCTTCGAGCTTGGCCGAGTCGCAGCGGA
ACCCTCCGCATGGGGGCGGAGTGAGCGGGAGTCGGGTGAGCCTTGGCATG
GCTTCGAAGGCTGTTGATTTCTCAGCGGCTTGGAGCCGCATTCACGCGAC
CTTGGACGGGTTGACTTCGGGGGAAGGCCTGCCGGCGGCAGAGGCCTCGT
GGCTGGCCCTCTACACGGACGTCTACCGCATTTGCACCAGTCCACCTGTT
GGGGGACTCGGCGGGCCTCCTGCGGCAGCAGGGGCGGGGATAGCAGGCAG
TGGGGGAGGGGTTCATCGGCGACTGTACGACCACTTGCACGACTTCTTGC
ATCAGCATTGCGATGCAGTGGTGGTGCGTCTTCTCACGGCGGCCGAGTCT
CACACGGCCTTCCAGTTTTTGACATTGTATGCAGATTTTTACACATTATA
TACGAAGGGGATGGAGACCGGCGGGAAATTGCTGGCCTACCTGGACCGGT
TCTGGATCACCAAGCACCACCACAAGAAGGGCATCGACCCCTCCCAAGGC
GTCATGTTTATCGCCGAGCTCGTCCCGCTCGTCTGGCGACAGCGTGTTCT
CCGACGCGACATTTCAAACTTGCTGCAGCGGGCCTTCAACGCCGTTGTGG
CTGATCTGCGTGCCTGCCCCGCCCCCCCCCCCC
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Synonyms
Publications