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Properties
| Property Name | Value |
|---|
| Product | dnl-type zinc finger |
| Orig transcript id | gnl|cribi|Naga_100017g69.356.mrna |
| Orig protein id | gnl|cribi|Naga_100017g69.356 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:626242..627520 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna877 ID=rna877|Name=rna877|organism=Nannochloropsis gaditana|type=mRNA|length=2523bp
AACAGGGATAAATGTGCCGACAAGACACCCCCTTCACCCAATTCAGTTAT
CAAACCCTCAGCGCTCGAATAAATCTGTTCAATCGATTAAAAATCTCAGT
GCGTCACCGGAAGCTCCAAAGCAGTGGAAATCCTTGTCATTTTCCCTGAC
TGATGCTTCAACTGAAGTATGATACTGAAGGACATCATTCCAGTACAAGG
GCAGGGCGAAGGAGAGGTTACGTGCGCACGGCTGCACTGAGGCTTTCTAT
GTATCGTACACTAAAGATTTATTTCACATATTCAAATGAGATCCATGCAT
TATTTCATTGCTGAGAACTCGTAGCTCCCAAAACGCTCTATGGCATGTCC
TCGCAGCTGTGAAGTCACGATTTTCACGCGTACGTTGTGCCTTGCTACCT
GTATTTTCTGATGCATTTCAGTCTCTCATATATTCCCATCATTTCACCTT
TTCCACATGACAGAAAAATCGTTCAAGAATGTGTAGACGGTGAGCATGTC
GGACGGTTGCCATGGCCTTACACGTTCATTTTCGCTCTGGCACAAGATAT
CACCCCCTTCTGCTGTGCGGGCTTCTTCTTATAGTGGGCACGTGTGTGAG
GCCCAGCGATGCTTTTACAGGCCAGTCAAGAAAGTTTTTTTGCCAATGGA
AGGAATGTTGGAAAACATTGAGCCAGCCATGTAGAGGGATGGAACCAGCG
GCTGCAACCACTACCGTCTCCGGCACTCCCACCCCAGAGGACTTAATCGG
GCACGCCACTCGTCTCCAACCTCTGGCAGGCCTGGCCTTTTTCCCCCTAG
GGCTAATCGAACGTCGTTTGGAGCATTTGTACGCTCTTTTCCCTCGTGAA
AACGCGACATCCATGGTATGCCGGGTCCCCGATCTTCTGTGTGTCGAGCC
CAACGACCTTGCTGCTCGAGTGGCGGAGCGTCAGGTCCAGTTGGCAGCAT
TACTTCCGGCCTGCCGACCTCTACGTTTGATGGCCAAAGCTCCCATCCTT
GTTTTTCAAGATTTTGATTCTCAAATTAAAAGCACGGCAGAGAGGCTGGA
GTGGGAGCTCCCTGGGATGGATCTGGCGCGAGTGGTCTGCCCTAACCCCG
CCGTCCTCACTCGGGCATGGGACACCGTCCTGTTCCCTCAGATCGTAGCC
CTTCGAGCCATTTTCCCCCAAGAAAATTTGGGGAGGATCATCATGCGTCG
GCCGGACCTCCTGTCTCGCGACGCAGCCGGCAGGCTCAGGGAGGGGATGG
AGGGGTTGGCGCGTCATTTGCCCTCGGTGAAGGTGGAGATGCTCGCGGCT
CGTCAGCCGGACATCCTCGCGCTCGAGCCCCGCCAGGTCGCCGCTCGCAT
CAAGCACTTGGAGGCTCTTTTTCCTGCGGCCACTCGTGCGGAAGTCGCTA
AAATGATCAACCGGAAGCCTTCCTTGCTCCTGACCAGCGTCGAGCGCGTG
CTCAGACCCAAGCTTGCCCGTCTGCGGAACATACTAGGCTCCGCCGCCGC
GCAGGAGCTTTGTCAGACCATGCCCTCAATACTCAGTCGCGATCTGGAGC
AGGTGGAGGCCCGCCTCAAACTGCTCAGGGCCCCGGTGCCGGGCCAGGAC
CTCGTCCGCTTTCTGAGGTACAACCCTGCCTTCCTCTCGAGCGCGCCCGG
TGCAGTCGGCGCCCGGCTCACGGCCCTGCAAAGCGTCTTTCCGCGAGGGG
TGGAACTTGGAAAAATGCTTATCCGGGAGCCCAAGCTTTACGCGGAAGAC
GTGGACGTGCTCGCGTTAAAGCTGGCGGAGGTCCATGCGGCGACAAGACT
GAGCAAAGAGGAGGTTGTAGAGCGCCTGCGACGGGATGCACGCTTTTTGC
TAGTGTCCTACGGGCGTCTGGCGTCCCGCTTGCGCTTTCTGAAGGCGCTT
GAAAATGTTGGAGCGGAGCCGTGGGAGTGGGCGCGGCAAGGGGACCCTGG
GGGGGAAGGAGGGGGGGAAGGAGGAGTCCGACCGTCCTTACAGCGGATCA
ACCTAGGCTCCATGGCCAGCATGCCCCTCGGGAGATTTCTCCACCTGTAC
CCGCTCTATCCCTTCTACCTCTTGCACGAGCTCGGCAGGTCCCCAACCCC
CCATAAGGAGGGCAGCAACGTGTATCACTTAGAGGAGGCACATTCCCAGA
TGCTGTGGCGAGACGGGGGTTTGCGTGACAGCCCCGTGAAGCAAATCAAC
GGCAATGGGGGGCGTCCCGGCCGTCCTCACTCGATTGGGCGTAAGGAAAA
CATGGGGGAAGAGAAGCAGATGCCACGCAGTTTTTGAGATGCGCGTCTCG
GGAGCGGGAACGCCAGTGACGGTATCGGTAAGGTGATGAATACTCGACGT
GCAGGATCCTCTGGATCTGGATGCCAGAAGTTGTGACAGATAAAAGGTCG
CATGGTGTAAAGTAATTTGATCGACTACTGGAGCACAACCTTCATGTTCA
TGCCCATACACATGTAAAAAGATCTCCCTCTTTGCGCAACACATGAATGA
AGCTTGTTTGCTTGTCGCTGGCA back to topprotein sequence of rna877 >rna877-protein ID=rna877-protein|Name=rna877|organism=Nannochloropsis gaditana|type=polypeptide|length=322bp
MKNTGFFPVRIRDERQRTQGNTCTSTGRAKKHSNTCSMDRMDACSTWSSQ
LVYVLLFFASGVRAAGIGYYADTSNCNAAFQPCPAPLITPSSLPLLSRRQ
DLLESRRAHGRRKEFFLTVARGKGFGKKPRGDGEEDGKQDGAQEASKVEE
GPSIIRPTFSHRGSSANAAGVTTTGSSAAPSPPSRKFQMLYTCNICEGRN
LIQVDRVAFTEGIVVARCKHCDAKHLVADNLSKLDFGGLVKKGKEGESNP
AGGKVTLDDILAARGEEAKYLDIKSNPELAAKRMNRVGARSDMGRLGGMI
YIVSIVYQMVGYHNLDKRDKEE back to topmRNA from alignment at CM002456.1:626242..627520- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna877 ID=rna877|Name=rna877|organism=Nannochloropsis gaditana|type=mRNA|length=1279bp|location=Sequence derived from alignment at CM002456.1:626242..627520- (Nannochloropsis gaditana)
ATGAAAAACACTGGTCACACTCTTGAAGACCCGCGGGATTGAATGGAGTG
CCGGCTTCTGGAGTCCTGAAGTAGGAGTCACGGGCACAGACGATGGAGGA
TGCCCCTACTAGGTAGTAACCTCCCGGGTCCTGGACGGCCTCGCAGGCTT
TTTTCCTGTTCGCATTCGAGACGAACGGCAAAGAACCCAAGGGAACACAT
GTACATCCACAGGTAGAGCAAAGAAGCATTCTAACACTTGCAGCATGGAT
AGGATGGACGCATGCAGCACCTGGTCTTCGCAATTGGTTTATGTCTTGCT
GTTTTTTGCGAGTGGGGTTCGGGCCGCAGGTATAGGTAGGTCGGAAGCGT
GCTCAGGACATACTAGTTTACTTTATCTCACGAATCATCTACACAGGATA
TTATGCTGACACCTCCAATTGCAACGCTGCTTTTCAGCCATGTCCTGCAC
CACTAATAACCCCGTCGTCCCTCCCGCTGCTCTCACGGCGGCAGGATCTT
CTCGAAAGTAGACGGGCACATGGGCGACGAAAAGAATTCTTTTTAACGGT
GGCAAGAGGCAAAGGCTTCGGCAAAAAGCCAAGAGGGGATGGAGAGGAGG
ACGGGAAGCAGGATGGAGCTCAGGAGGCCAGCAAGGTGCGTGTTGGCTAG
CGGGATTCTCCTTTGCTGCCCGTCTGAAGTTCATTACTTGCTATCTGTTC
AGGTGGAGGAGGGACCGAGCATCATTCGACCCACTTTCAGTCATCGCGGT
AGCAGCGCAAATGCGGCTGGGGTTACTACCACTGGGTCGTCGGCGGCGCC
TTCTCCTCCTTCCCGGAAATTTCAAATGCTGTACACGTGCAACATCTGTG
AAGGACGGAACCTCATTCAAGTCGACCGCGTCGCTTTCACCGAAGGCATT
GTGGTTGCTCGCTGCAAACATTGTGATGCCAAGCACCTTGTCGCCGATAA
CTTGAGTAAGCTTGATTTCGGGGGCTTGGTCAAGAAGGGGAAGGAGGGGG
AGTCCAATCCTGCAGGAGGTAAAGTGACTCTTGATGACATCTTAGCGGCA
CGCGGTGAGGAAGCGAAGTACTTAGACATAAAAAGTAATCCGGAATTAGC
GGCCAAGTACGATCTCATGGTGCTCGAAGATGGCACCGTGGAGTTGGCGC
CAAAGGAGAATGAATCGGGTGGGAGCCAGGAGTGACATGGGACGCCTGGG
CGGGATGATTTACATAGTGAGCATTGTTTATCAAATGGTTGGCTACCACA
ATCTAGACAAGAGAGATAAAGAGGAATAA back to topCoding sequence (CDS) from alignment at CM002456.1:626242..627520- >rna877 ID=rna877|Name=rna877|organism=Nannochloropsis gaditana|type=CDS|length=4845bp|location=Sequence derived from alignment at CM002456.1:626242..627520- (Nannochloropsis gaditana)
GAGAATGAATCGGGTGGGAGCCAGGAGTGACATGGGACGCCTGGGCGGGA
TGATTTACATAGTGAGCATTGTTTATCAAATGGTTGGCTACCACAATCTA
GACAAGAGAGATAAAGAGGAATAAGTGGAGGAGGGACCGAGCATCATTCG
ACCCACTTTCAGTCATCGCGGTAGCAGCGCAAATGCGGCTGGGGTTACTA
CCACTGGGTCGTCGGCGGCGCCTTCTCCTCCTTCCCGGAAATTTCAAATG
CTGTACACGTGCAACATCTGTGAAGGACGGAACCTCATTCAAGTCGACCG
CGTCGCTTTCACCGAAGGCATTGTGGTTGCTCGCTGCAAACATTGTGATG
CCAAGCACCTTGTCGCCGATAACTTGAGTAAGCTTGATTTCGGGGGCTTG
GTCAAGAAGGGGAAGGAGGGGGAGTCCAATCCTGCAGGAGGTAAAGTGAC
TCTTGATGACATCTTAGCGGCACGCGGTGAGGAAGCGAAGTACTTAGACA
TAAAAAGTAATCCGGAATTAGCGGCCAAGATATTATGCTGACACCTCCAA
TTGCAACGCTGCTTTTCAGCCATGTCCTGCACCACTAATAACCCCGTCGT
CCCTCCCGCTGCTCTCACGGCGGCAGGATCTTCTCGAAAGTAGACGGGCA
CATGGGCGACGAAAAGAATTCTTTTTAACGGTGGCAAGAGGCAAAGGCTT
CGGCAAAAAGCCAAGAGGGGATGGAGAGGAGGACGGGAAGCAGGATGGAG
CTCAGGAGGCCAGCAAGGCTTTTTTCCTGTTCGCATTCGAGACGAACGGC
AAAGAACCCAAGGGAACACATGTACATCCACAGGTAGAGCAAAGAAGCAT
TCTAACACTTGCAGCATGGATAGGATGGACGCATGCAGCACCTGGTCTTC
GCAATTGGTTTATGTCTTGCTGTTTTTTGCGAGTGGGGTTCGGGCCGCAG
GTATAGATGAAAAACACTGGAGAATGAATCGGGTGGGAGCCAGGAGTGAC
ATGGGACGCCTGGGCGGGATGATTTACATAGTGAGCATTGTTTATCAAAT
GGTTGGCTACCACAATCTAGACAAGAGAGATAAAGAGGAATAAGTGGAGG
AGGGACCGAGCATCATTCGACCCACTTTCAGTCATCGCGGTAGCAGCGCA
AATGCGGCTGGGGTTACTACCACTGGGTCGTCGGCGGCGCCTTCTCCTCC
TTCCCGGAAATTTCAAATGCTGTACACGTGCAACATCTGTGAAGGACGGA
ACCTCATTCAAGTCGACCGCGTCGCTTTCACCGAAGGCATTGTGGTTGCT
CGCTGCAAACATTGTGATGCCAAGCACCTTGTCGCCGATAACTTGAGTAA
GCTTGATTTCGGGGGCTTGGTCAAGAAGGGGAAGGAGGGGGAGTCCAATC
CTGCAGGAGGTAAAGTGACTCTTGATGACATCTTAGCGGCACGCGGTGAG
GAAGCGAAGTACTTAGACATAAAAAGTAATCCGGAATTAGCGGCCAAGAT
ATTATGCTGACACCTCCAATTGCAACGCTGCTTTTCAGCCATGTCCTGCA
CCACTAATAACCCCGTCGTCCCTCCCGCTGCTCTCACGGCGGCAGGATCT
TCTCGAAAGTAGACGGGCACATGGGCGACGAAAAGAATTCTTTTTAACGG
TGGCAAGAGGCAAAGGCTTCGGCAAAAAGCCAAGAGGGGATGGAGAGGAG
GACGGGAAGCAGGATGGAGCTCAGGAGGCCAGCAAGGCTTTTTTCCTGTT
CGCATTCGAGACGAACGGCAAAGAACCCAAGGGAACACATGTACATCCAC
AGGTAGAGCAAAGAAGCATTCTAACACTTGCAGCATGGATAGGATGGACG
CATGCAGCACCTGGTCTTCGCAATTGGTTTATGTCTTGCTGTTTTTTGCG
AGTGGGGTTCGGGCCGCAGGTATAGATGAAAAACACTGGAGAATGAATCG
GGTGGGAGCCAGGAGTGACATGGGACGCCTGGGCGGGATGATTTACATAG
TGAGCATTGTTTATCAAATGGTTGGCTACCACAATCTAGACAAGAGAGAT
AAAGAGGAATAAGTGGAGGAGGGACCGAGCATCATTCGACCCACTTTCAG
TCATCGCGGTAGCAGCGCAAATGCGGCTGGGGTTACTACCACTGGGTCGT
CGGCGGCGCCTTCTCCTCCTTCCCGGAAATTTCAAATGCTGTACACGTGC
AACATCTGTGAAGGACGGAACCTCATTCAAGTCGACCGCGTCGCTTTCAC
CGAAGGCATTGTGGTTGCTCGCTGCAAACATTGTGATGCCAAGCACCTTG
TCGCCGATAACTTGAGTAAGCTTGATTTCGGGGGCTTGGTCAAGAAGGGG
AAGGAGGGGGAGTCCAATCCTGCAGGAGGTAAAGTGACTCTTGATGACAT
CTTAGCGGCACGCGGTGAGGAAGCGAAGTACTTAGACATAAAAAGTAATC
CGGAATTAGCGGCCAAGATATTATGCTGACACCTCCAATTGCAACGCTGC
TTTTCAGCCATGTCCTGCACCACTAATAACCCCGTCGTCCCTCCCGCTGC
TCTCACGGCGGCAGGATCTTCTCGAAAGTAGACGGGCACATGGGCGACGA
AAAGAATTCTTTTTAACGGTGGCAAGAGGCAAAGGCTTCGGCAAAAAGCC
AAGAGGGGATGGAGAGGAGGACGGGAAGCAGGATGGAGCTCAGGAGGCCA
GCAAGGCTTTTTTCCTGTTCGCATTCGAGACGAACGGCAAAGAACCCAAG
GGAACACATGTACATCCACAGGTAGAGCAAAGAAGCATTCTAACACTTGC
AGCATGGATAGGATGGACGCATGCAGCACCTGGTCTTCGCAATTGGTTTA
TGTCTTGCTGTTTTTTGCGAGTGGGGTTCGGGCCGCAGGTATAGATGAAA
AACACTGGAGAATGAATCGGGTGGGAGCCAGGAGTGACATGGGACGCCTG
GGCGGGATGATTTACATAGTGAGCATTGTTTATCAAATGGTTGGCTACCA
CAATCTAGACAAGAGAGATAAAGAGGAATAAGTGGAGGAGGGACCGAGCA
TCATTCGACCCACTTTCAGTCATCGCGGTAGCAGCGCAAATGCGGCTGGG
GTTACTACCACTGGGTCGTCGGCGGCGCCTTCTCCTCCTTCCCGGAAATT
TCAAATGCTGTACACGTGCAACATCTGTGAAGGACGGAACCTCATTCAAG
TCGACCGCGTCGCTTTCACCGAAGGCATTGTGGTTGCTCGCTGCAAACAT
TGTGATGCCAAGCACCTTGTCGCCGATAACTTGAGTAAGCTTGATTTCGG
GGGCTTGGTCAAGAAGGGGAAGGAGGGGGAGTCCAATCCTGCAGGAGGTA
AAGTGACTCTTGATGACATCTTAGCGGCACGCGGTGAGGAAGCGAAGTAC
TTAGACATAAAAAGTAATCCGGAATTAGCGGCCAAGATATTATGCTGACA
CCTCCAATTGCAACGCTGCTTTTCAGCCATGTCCTGCACCACTAATAACC
CCGTCGTCCCTCCCGCTGCTCTCACGGCGGCAGGATCTTCTCGAAAGTAG
ACGGGCACATGGGCGACGAAAAGAATTCTTTTTAACGGTGGCAAGAGGCA
AAGGCTTCGGCAAAAAGCCAAGAGGGGATGGAGAGGAGGACGGGAAGCAG
GATGGAGCTCAGGAGGCCAGCAAGGCTTTTTTCCTGTTCGCATTCGAGAC
GAACGGCAAAGAACCCAAGGGAACACATGTACATCCACAGGTAGAGCAAA
GAAGCATTCTAACACTTGCAGCATGGATAGGATGGACGCATGCAGCACCT
GGTCTTCGCAATTGGTTTATGTCTTGCTGTTTTTTGCGAGTGGGGTTCGG
GCCGCAGGTATAGATGAAAAACACTGGAGAATGAATCGGGTGGGAGCCAG
GAGTGACATGGGACGCCTGGGCGGGATGATTTACATAGTGAGCATTGTTT
ATCAAATGGTTGGCTACCACAATCTAGACAAGAGAGATAAAGAGGAATAA
GTGGAGGAGGGACCGAGCATCATTCGACCCACTTTCAGTCATCGCGGTAG
CAGCGCAAATGCGGCTGGGGTTACTACCACTGGGTCGTCGGCGGCGCCTT
CTCCTCCTTCCCGGAAATTTCAAATGCTGTACACGTGCAACATCTGTGAA
GGACGGAACCTCATTCAAGTCGACCGCGTCGCTTTCACCGAAGGCATTGT
GGTTGCTCGCTGCAAACATTGTGATGCCAAGCACCTTGTCGCCGATAACT
TGAGTAAGCTTGATTTCGGGGGCTTGGTCAAGAAGGGGAAGGAGGGGGAG
TCCAATCCTGCAGGAGGTAAAGTGACTCTTGATGACATCTTAGCGGCACG
CGGTGAGGAAGCGAAGTACTTAGACATAAAAAGTAATCCGGAATTAGCGG
CCAAGATATTATGCTGACACCTCCAATTGCAACGCTGCTTTTCAGCCATG
TCCTGCACCACTAATAACCCCGTCGTCCCTCCCGCTGCTCTCACGGCGGC
AGGATCTTCTCGAAAGTAGACGGGCACATGGGCGACGAAAAGAATTCTTT
TTAACGGTGGCAAGAGGCAAAGGCTTCGGCAAAAAGCCAAGAGGGGATGG
AGAGGAGGACGGGAAGCAGGATGGAGCTCAGGAGGCCAGCAAGGCTTTTT
TCCTGTTCGCATTCGAGACGAACGGCAAAGAACCCAAGGGAACACATGTA
CATCCACAGGTAGAGCAAAGAAGCATTCTAACACTTGCAGCATGGATAGG
ATGGACGCATGCAGCACCTGGTCTTCGCAATTGGTTTATGTCTTGCTGTT
TTTTGCGAGTGGGGTTCGGGCCGCAGGTATAGATGAAAAACACTG back to top
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