rna8768, rna8768 (mRNA) Nannochloropsis gaditana

Overview
Namerna8768
Unique Namerna8768
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length309
Alignment locationKK037250.1:119957..121753 -

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Properties
Property NameValue
Productnifu like protein
Orig transcript idgnl|cribi|Naga_100220g8.7206.mrna
Orig protein idgnl|cribi|Naga_100220g8.7206
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:119957..121753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100220g8gene8500Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8768rna8768-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21931.1cds8738Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8768 ID=rna8768|Name=rna8768|organism=Nannochloropsis gaditana|type=mRNA|length=309bp
ATGAGCAAGAAGCCTCGTAATCAAATTCCAAACGGGTGTCACTCGTTACT
GGACAACAGGATTCTATTCAGTACCACAGCTTCAACATGCTCCTTTTGTA
CCACATACAGAACCTGTTTAGCGTCACATATCCTTAAGGAGATTCCAATT
ATGGGTTCTGATTATGAGTTAATCTCTAGAGCATTCATGCTGCTTTACCT
TAAACAATCAAGTAATTGTGAAATGTTGACGGTTTGGGTGCATTTCACCA
TGTGGTATTGTAGGAAAACGAAGTTTTTAATGTGCGGGGTCCCTTTAGAC
CCGGTCTAG
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protein sequence of rna8768

>rna8768-protein ID=rna8768-protein|Name=rna8768|organism=Nannochloropsis gaditana|type=polypeptide|length=248bp
MLTSRFSPARRMSRGRGQRGQNAASAFLTCVALFPLLAHAFLPATFKPFR
AYSDASSTLVVPLSRTSTDTITSPFESGVKQGGGDDGPLPLTLENVEMVL
DEMRPYLMSDGGNVVVSDIDGPVVKLELQGACGSCPSSTMTMKMGLERRL
KEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISG
LGGLQPLVLLHMEGNNQSLFSVRMEITQRILRNFMVPGLRVEWTDQVS
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mRNA from alignment at KK037250.1:119957..121753-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8768 ID=rna8768|Name=rna8768|organism=Nannochloropsis gaditana|type=mRNA|length=1797bp|location=Sequence derived from alignment at KK037250.1:119957..121753- (Nannochloropsis gaditana)
GCGTGCAAGCACAGAGCGAGGAGCACAGACATTAGGGAAGATATCGGGGT
CTTGTCTCCTGTGATTCTCCCGATGGCCGACTCAGATGTAGTCAGGCTCG
CATAAATTGGGTAACAGGTTGTTTCGCGCAGACTTTGGCTGCTAAATACG
ATGTCGTTGTAGATCTTGCCTTCACTGTCCTTGCCTGAGCTCGTAGACGC
GTCGCGCATCATCTTAAGAGGGTTAATACAAGAAAATGTCCCCACAGGAA
GCCGCAATCCTTTTCATTGGACCAAAATATTATGCTTACATCCCGTTTCT
CGCCAGCCAGAAGGATGTCGAGGGGTCGTGGACAACGCGGCCAAAATGCA
GCATCAGCATTCTTGACGTGCGTCGCCCTCTTCCCCCTGTTAGCGCACGC
TTTTCTCCCCGCTACATTCAAGCCCTTCCGCGCGTACTCAGACGCTTCTT
CGACCCTTGTCGTTCCACTTTCTCGTACGTCAACTGACACAATCACTTCA
CCATTTGAGTCTGGCGTTAAGCAGGTATGCAACACTGCGGAAGGGGTGGT
GTAGTTTCTGCCCGGACTCGAAGCCCATAGCTGAGATGCTTAGTATACAT
GGCTCTCATGCACTCGTTCCTCTCATGACATCAATACCACGTAGGGTGGA
GGGGACGATGGTCCTTTGCCGCTGACGCTTGAGAATGTGGAGATGGTGCT
GGACGAGATGCGACCTTATTTGATGTCAGACGGGTACGTGGGCACATAGT
GGGAAGAAAGCGGAGGACGTGATCAATACATGTGACTTGTCGAGCAACTG
AGCCTCAGTATGTATATTGCCTGACACTTGTTGTCTGTAATTCTTTCCAA
CCGTGGCTGTGGACAGGGGTAATGTGGTGGTTTCCGATATCGACGGTCCC
GTTGTAAAGCTGGAGCTTCAAGGTGCGTGTGGAAGCTGCCCGTCCTCGAC
CATGACCATGAAAATGGGCCTGGAGCGTCGCCTTAAAGAGAAAATTCCGG
AGATCAGTGAGGTGAGCTGGTGGTCCCGAGGTCTTGTCTCATACAAGGGG
TGTCTCAGGGGCGCTAGCAGGGTGGGTCGACACACTTCCTTGAGCTAATT
CTCGTTCGTCCGTATGCTCGCATCATGGCAGGTGATTCAAGCAATGCCCG
AGGGCCCAGCACTTTCTACAGAGAACATTGACCAGGTCTTGGAGGGCGTT
CGTCCTTTCCTGATGGTGGCGGGAGGGTCAATATCTGTCAAGGAGATTTC
TGGCTTAGGAGGACTTCAGCCACTTGTGTTGCTTCACATGGAAGGCAACA
ATCAAAGTCTTTTTTCCGTTCGAATGGAGATAACACAAAGAATATTGCGA
AATTTTATGGTGCCGGGATTGCGCGTGGAGTGGACGGATCAGGTGTCGTA
AAAGAGAATTAGGCGCGCAGGAAGAGCGGAAGAGAAGGCGCGGTGCTGTT
TATCGAGCTGAAAATGAAGAAAATTGCACTCGAGCGTGCGCAAACCTCGA
CTAGAGCGTACCGTTTTGTGTATGTCGTGGTGGCAACCACTTGATTCGCC
TCTAAGATGCTAAATTGATGCGAACTTTTGACCAAGAAAAAAACGCAAGA
TCTGATGAAATAAGTCATCCTGAGGAAACCTCTGAGAGGGAGTCGATAAA
TGGTGAAAAGGTGCTACAGGTGTGTGCGATGACATGTAAAGTTGGTACTT
GGAAGAGGGAAAATAAAAACAAAAGCTCAGTTTCAAAACGCGGTCTCATA
TCGCCTAAGAATGAACCCGGTATAGTAGGCGTGGTGGTAGATATTCT
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Coding sequence (CDS) from alignment at KK037250.1:119957..121753-

>rna8768 ID=rna8768|Name=rna8768|organism=Nannochloropsis gaditana|type=CDS|length=2988bp|location=Sequence derived from alignment at KK037250.1:119957..121753- (Nannochloropsis gaditana)
GTGATTCAAGCAATGCCCGAGGGCCCAGCACTTTCTACAGAGAACATTGA
CCAGGTCTTGGAGGGCGTTCGTCCTTTCCTGATGGTGGCGGGAGGGTCAA
TATCTGTCAAGGAGATTTCTGGCTTAGGAGGACTTCAGCCACTTGTGTTG
CTTCACATGGAAGGCAACAATCAAAGTCTTTTTTCCGTTCGAATGGAGAT
AACACAAAGAATATTGCGAAATTTTATGGTGCCGGGATTGCGCGTGGAGT
GGACGGATCAGGTGTCGTAAGGGTAATGTGGTGGTTTCCGATATCGACGG
TCCCGTTGTAAAGCTGGAGCTTCAAGGTGCGTGTGGAAGCTGCCCGTCCT
CGACCATGACCATGAAAATGGGCCTGGAGCGTCGCCTTAAAGAGAAAATT
CCGGAGATCAGTGAGGGTGGAGGGGACGATGGTCCTTTGCCGCTGACGCT
TGAGAATGTGGAGATGGTGCTGGACGAGATGCGACCTTATTTGATGTCAG
ACGGATGCTTACATCCCGTTTCTCGCCAGCCAGAAGGATGTCGAGGGGTC
GTGGACAACGCGGCCAAAATGCAGCATCAGCATTCTTGACGTGCGTCGCC
CTCTTCCCCCTGTTAGCGCACGCTTTTCTCCCCGCTACATTCAAGCCCTT
CCGCGCGTACTCAGACGCTTCTTCGACCCTTGTCGTTCCACTTTCTCGTA
CGTCAACTGACACAATCACTTCACCATTTGAGTCTGGCGTTAAGCAGGTG
ATTCAAGCAATGCCCGAGGGCCCAGCACTTTCTACAGAGAACATTGACCA
GGTCTTGGAGGGCGTTCGTCCTTTCCTGATGGTGGCGGGAGGGTCAATAT
CTGTCAAGGAGATTTCTGGCTTAGGAGGACTTCAGCCACTTGTGTTGCTT
CACATGGAAGGCAACAATCAAAGTCTTTTTTCCGTTCGAATGGAGATAAC
ACAAAGAATATTGCGAAATTTTATGGTGCCGGGATTGCGCGTGGAGTGGA
CGGATCAGGTGTCGTAAGGGTAATGTGGTGGTTTCCGATATCGACGGTCC
CGTTGTAAAGCTGGAGCTTCAAGGTGCGTGTGGAAGCTGCCCGTCCTCGA
CCATGACCATGAAAATGGGCCTGGAGCGTCGCCTTAAAGAGAAAATTCCG
GAGATCAGTGAGGGTGGAGGGGACGATGGTCCTTTGCCGCTGACGCTTGA
GAATGTGGAGATGGTGCTGGACGAGATGCGACCTTATTTGATGTCAGACG
GATGCTTACATCCCGTTTCTCGCCAGCCAGAAGGATGTCGAGGGGTCGTG
GACAACGCGGCCAAAATGCAGCATCAGCATTCTTGACGTGCGTCGCCCTC
TTCCCCCTGTTAGCGCACGCTTTTCTCCCCGCTACATTCAAGCCCTTCCG
CGCGTACTCAGACGCTTCTTCGACCCTTGTCGTTCCACTTTCTCGTACGT
CAACTGACACAATCACTTCACCATTTGAGTCTGGCGTTAAGCAGGTGATT
CAAGCAATGCCCGAGGGCCCAGCACTTTCTACAGAGAACATTGACCAGGT
CTTGGAGGGCGTTCGTCCTTTCCTGATGGTGGCGGGAGGGTCAATATCTG
TCAAGGAGATTTCTGGCTTAGGAGGACTTCAGCCACTTGTGTTGCTTCAC
ATGGAAGGCAACAATCAAAGTCTTTTTTCCGTTCGAATGGAGATAACACA
AAGAATATTGCGAAATTTTATGGTGCCGGGATTGCGCGTGGAGTGGACGG
ATCAGGTGTCGTAAGGGTAATGTGGTGGTTTCCGATATCGACGGTCCCGT
TGTAAAGCTGGAGCTTCAAGGTGCGTGTGGAAGCTGCCCGTCCTCGACCA
TGACCATGAAAATGGGCCTGGAGCGTCGCCTTAAAGAGAAAATTCCGGAG
ATCAGTGAGGGTGGAGGGGACGATGGTCCTTTGCCGCTGACGCTTGAGAA
TGTGGAGATGGTGCTGGACGAGATGCGACCTTATTTGATGTCAGACGGAT
GCTTACATCCCGTTTCTCGCCAGCCAGAAGGATGTCGAGGGGTCGTGGAC
AACGCGGCCAAAATGCAGCATCAGCATTCTTGACGTGCGTCGCCCTCTTC
CCCCTGTTAGCGCACGCTTTTCTCCCCGCTACATTCAAGCCCTTCCGCGC
GTACTCAGACGCTTCTTCGACCCTTGTCGTTCCACTTTCTCGTACGTCAA
CTGACACAATCACTTCACCATTTGAGTCTGGCGTTAAGCAGGTGATTCAA
GCAATGCCCGAGGGCCCAGCACTTTCTACAGAGAACATTGACCAGGTCTT
GGAGGGCGTTCGTCCTTTCCTGATGGTGGCGGGAGGGTCAATATCTGTCA
AGGAGATTTCTGGCTTAGGAGGACTTCAGCCACTTGTGTTGCTTCACATG
GAAGGCAACAATCAAAGTCTTTTTTCCGTTCGAATGGAGATAACACAAAG
AATATTGCGAAATTTTATGGTGCCGGGATTGCGCGTGGAGTGGACGGATC
AGGTGTCGTAAGGGTAATGTGGTGGTTTCCGATATCGACGGTCCCGTTGT
AAAGCTGGAGCTTCAAGGTGCGTGTGGAAGCTGCCCGTCCTCGACCATGA
CCATGAAAATGGGCCTGGAGCGTCGCCTTAAAGAGAAAATTCCGGAGATC
AGTGAGGGTGGAGGGGACGATGGTCCTTTGCCGCTGACGCTTGAGAATGT
GGAGATGGTGCTGGACGAGATGCGACCTTATTTGATGTCAGACGGATGCT
TACATCCCGTTTCTCGCCAGCCAGAAGGATGTCGAGGGGTCGTGGACAAC
GCGGCCAAAATGCAGCATCAGCATTCTTGACGTGCGTCGCCCTCTTCCCC
CTGTTAGCGCACGCTTTTCTCCCCGCTACATTCAAGCCCTTCCGCGCGTA
CTCAGACGCTTCTTCGACCCTTGTCGTTCCACTTTCTCGTACGTCAACTG
ACACAATCACTTCACCATTTGAGTCTGGCGTTAAGCAG
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Synonyms
Publications