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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100823g2.4719.mrna |
| Orig protein id | gnl|cribi|Naga_100823g2.4719 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:42409..44299 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8736 ID=rna8736|Name=rna8736|organism=Nannochloropsis gaditana|type=mRNA|length=3471bp
AGGGCGCGCGGGAGAAGAAAAAGACGATCCAGACGCGCCGACCACAGAGA
GTGCGACCGTACACCTCTTCCGGCGCCATCACGCAGGCAGCTTTCAGGAG
TACCCTGCTGAAGGGATTAAAATACCCATGGCAGACGCTGCCAGTGACCC
CACCACCTCAAAATTTTCTCACGATGTAGGCATGGGGACTTTCGTCTTGG
CTTTGGCGTTGGGAATTGTAGCCCGGGCCTGCCTCTCATCCTTGGTCCGT
CTCCCGTACACGTGCCTCGTCCTCATCTTCGGACTTCTCTATGGCTTTCT
TATCTACACGGAAGTCGGGATCACGGGATCGGACATTTTCAGTCGATCTG
CAGACCTGTGGATCAATATCTCGCCCGAAGCTATCTTGACGGTGATCCTG
CCTATCCTGATCTTCGGTTCGTCCTTCGCCAGTGACCTTCACCTGTTCTT
GCAGCAGCTGACTCCTGTGTTGACGCTTGCCGGGCCTGCTGTGCTCGTGA
ACGCAGCACTGCTGGGGCTGACGGCCAAATACGTGCTACCGTACAATTGG
GACTGGATGACCTCACTTATGGTAGGGTCGATGCTGTCAGCGACAGACCC
TGTGGCCGTGGTGGCGATATTGAAGGAGCTGGGAGTGGTGGAAAGCCTGT
CCATCCTGATCGACGGGGAGAGCTTGCTGAACGACGGCTTTGCCATCGTC
CTGTACACGATATTCAGCCGACTGGTGGTACACGAAGAGACCCTGTCCGT
CTTGGAGACGGTGGAGTCCGCCGTCATCCTCTGTCTGGGCGGGCCGGCCA
TAGGGCTAGTGGTAGGGGCGTTGACCAGCTACATCTTAGGCGTGCTTTTG
AACGACCCAGCGTCGGAAATCACGATGACCATCCTCTGCGGCTACGGTGC
CTACCTCCTTGCCGAGCTCGCCGAAGCCTCGGGTGTCCTCTCCATGGTGG
TGGCCGGTCTCTACCTCTCCTTCCACGGTTTAGGCCGTATCTCCGCCCGC
GTCACCGGTTCGCTCAAGTCCTTCTGGGCTATGGCGGCATTCATCAGCGA
GACCATTATTTTCTTTGTCAGCGGCTTGATCATGGCGGAGAAAGCCCTGA
TTTCCGAGACGGTACAGGGCCGCGACTGGGGCTACCTCTTCCTTCTCTAC
CTGATCGTAAACGCCACCCGCTTCGTCGGGGTTTTCCTCTTCTTCCCCAC
CTTAGCCCGTGGTCCCTACGGTATCAATTGGCGCCAAGCCGTTCTGCTCT
CGTGGGGAGGATTGCGGGGTGCAGTCTCCTTAACTTTGGCCTTGGTCGTG
AGTCAGGAAGAGGGAATTCCGGAGGAAACCCGCGCACTCATCCTCTTCTT
CACGGCTGGCATTGTCCTTCTGACCATATTGATCAACGGTTCTACTTGCA
AGCTCGTGCTTCAGAAGCTCAAGCTGAACAATCCTACCCGGGTGGAGCAG
GAACTTTACATTCGCGCTATGAACCTGATCGAAAACGAGCTGGAGGTGTC
GTTGCTGAAGCTCAAAAACGATAAGTACCTGGGAAATGCGGATTGGAACG
TGGTTTATCGTTATCTGCCCGTATTCTCGCCGCAAATCTATTGGCACCGT
GTAAGGGAAGGGCACATTTGTCTGGACGAGGCAGAGATTGCCTTAGTGGG
CCGGTACGTGCGGGAAGAGGAGGAGGAAAAAGAAGGAGGGGAGGAAGGCG
GGTGGAAGGAAGGACGGAAACGAAGCCACAGTTTGATGGGGCCCACTATG
GTGGGGTCGGGCCCCGGGAAGCTCTTGGGCCCCCTCTTCTCCTGCTGTGG
AGGGAGTCGGGAGGGCGGAGGAGGGGGAGGAAGCAAGTACGAGGAGCTAC
CCCCCCGCTTGCGTCATCGCTGGCGGGAGTACACGACCCGTTTCAACGGA
AAATTAAAATCTGGGATCGACGGAGAGAGATTGAGCGGGATTCGGAAGCA
AGTGTGGGAGAGCTTAGCATTGGCCCGTGGCGTGTTTCCTCCCGCCACCC
CTTCGGCCCTCCCTCCGCCCCCCCCTCCCTCTCACCCGCATGCCTTCGGT
TTGTTGCCCCTCCCGTCCTGGGTGCACGGGGAGGAGAAGGGTGAGAAGGG
TGGAAGGGATGGCAAGGCAAAGGAGGGGAGGGAGCAGGGAGGCAAGGGGG
TCCGGGGGCGGGAAGGAAAGCGGCGGTTGGCACTTCCGACGTGCCACGCG
CGACATGGAGAGCGCGGGGGAGAAGGAAGGGCAGAAGGAGGGAGGGAGGG
AAGGAGGAGAAGGAGAGAGCGTGCTGCCCGCCCAAGGGCCCCTGGACTTT
CAGCCCCTCGTCTCCAGGCACCACCACTCCCTCGTTGACCCACCCCCTCC
CCAGGTCCTCAAGGGGTCCCCGCAGCGGCCCATGCCCGTGCTCCCCGAGG
CCTCCCGGTCGTTGCCTGCTGCTTCGGTCCCCCCCTCTCGGAACCTCTTT
GCGAACCTCTTCACCGCTCCCGCTCCCCCTCCTCGTCCATCCTCCCACGC
CCCTGCCGCCGCCTCCCTCCCATCCGTCGACGCCAGCTTGGACCCGCCCG
TCAATGTGGAGAACCCTCCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCGT
CCCTCCTCGCGGGCGCTCAGGGAAGCCCGCATTCGCCTGCTCACGGTTCT
CCGGCATGTCTATTCCTCCTCCTTCCACTCCGGCCTCCTCTCCCCCCCAG
GCCTCCGAGCTTTTGAACGGAACCTCTCCATACTCATCACCCAGCCTTCC
CTCCCCCTCAACGAATGGGCGGGTCTGGAGGGACACATTCTACTTCCGTT
ACGGGCCGTGAAAGCACGGCCCAACTGGCGGCGATTGCCGGTGGTGGGGG
GCGCCGTCGAGTTTTTCCTCTTTCAAAAGTTGGCGTTCTTCTTTGAATTG
GCCGTCGTCTTTATCGAAGCGCATTCGAGCATCAACATCAAATTGAGCGA
ACTCTTCGGTAAAAACGGGCCCGTGACCCGGCAGCTCGAGAAGGAAGTGG
AGGAGGAAGTGGGCAAGGCCAAGGCCGCCCTGGAAGAGTTCGTGCCCGTC
TTCCCCGACATCATCAACAGCGTCAAGACGGAAATGGCGGCGCGCGTCCT
CCTGCACAAGTGTCGCTCCATGCTGGAGGCGGCCGAGGAGAGCGGCTCCT
TGGAAACGCGGGAGTTCGAAGACGCGATCCGGGAGGTGGACGACTCCATG
GTCAAGCTCTACGACCACACCCACGCCGAGGCCCCCGCCCCCCGTTCCTC
CCTCCTGGCCAGCCTCTCCTTCCTCCGCTTCCTCCCTCCCTCCCAGCGCG
ACAGTCTCTTCGCATCCCCTGCCTCCCCCTTCTGCCGCGACGTGTACGTC
CGGAGCGACACCTGCTTCCTCCCCAAAACCTCCTCCCTCCCTTCCTCCCC
CCCTCCTTCCCTCCCGGGCTGGTACGTGATAGTCCGGGGCTCCGTGGCGG
TGGATCCCGACGTGGAGGAGG back to topprotein sequence of rna8736 >rna8736-protein ID=rna8736-protein|Name=rna8736|organism=Nannochloropsis gaditana|type=polypeptide|length=545bp
EELLRSLWWVVAALELKQEGGREGGEEGGREGGREGVALQECSLAQLASL
LGEATLLHLPEGGQGGREGGRETMRRMNLRTLTRGGTLRNLLPLTGRVPN
EGGREGGREGKKDGLVEMTMGAPGTSLASQFQEALQQQQQQPQQPQQQQQ
LHEVFEADATSHLVLLTGWMERVHAGGQDEAGKGKERERRPPLWGGRVRE
REGGKEEKEKKGPGGVTGALTAILSTVGGAGGGKGGTGEGGHGEGRDGGD
SGTRSPAMPLVAPPTVVVPYLPAGRYTLAPGTVAFVLPESKCRLVRQQVQ
RRSPHTESAPPKEEEEGGDEGEGEAEGGERGGRSLLGKEGEGLIRQRFTK
AASVGSRHPPAARQSPSQPDTPLLSVHFRSYTGSPEGGKAGGLGGGAGAL
KPRRSLSHAAGGQHHRTIGGYNLVDPLPFDRSGEKGNPEEDVAEEQPPWQ
EAEEESGLRMRRRRPSPPLGIVGAPMALYGNSPLAGSAGGFESSELRRRN
SASSDQGREGDGRGNRDGGGDMDAAESTEIRLSRSLSKSGGSKGV back to topmRNA from alignment at KK037250.1:42409..44299+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8736 ID=rna8736|Name=rna8736|organism=Nannochloropsis gaditana|type=mRNA|length=1891bp|location=Sequence derived from alignment at KK037250.1:42409..44299+ (Nannochloropsis gaditana)
GAAGAATTGTTGAGGTCGCTGTGGtgggtggtggcggccctGGAGTTGAA
gcaagagggtgggagggagggcggggaggagggcgggagggagggcggga
gggagggcgtcgcTCTCCAGGAATGCTCGCTGGCACAACTGGCGTCTCTT
TTGGGCGAGGCGACGCTTTTGCACCTCCCTGAAggtggacagggagggag
ggagggagggagggagactaTGCGCCGGATGAACCTGAGGACGCtgacaa
ggggggggacctTGAGGAACTTGCTGCCTCTGACCGGACGGGTGccgaac
gagggagggagggagggtgggagggagggaaagaaggatggATTGGTGGA
GATGACGATGGGGGCGCCCGGGACGTCTTTGGCAAGTCAGTTCCAGGAAG
CcttgcagcagcaacaacagcaaccaCAGCAAccgcaacagcaacagcag
ctgcACGAGGTGTTTGAAGCCGATGCGACCAGCCACCTGGTGCTTTTGAC
CGGGTGGATGGAGCGGGTGCATGCTGGGGgccaggacgaggcggggaaag
ggaaggagagggagagacgtcctcccctttggGGAGGTCGGGtacgagag
agggagggagggaaggaggagaaggagaagaagggcccggggggggtcAC
TGGAGCCTTGACAGCCATTTTGAGCAcggtgggcggggcaggggggggaa
agggagggacaggcgagggcgggcacggggaaGGCAGAGATGGCGGAGAC
AGTGGGACAAGGTCGCCGGCGATGCCTCTCGTGGCGCCCCCCACGGTGGT
ggtcccctacctccctgcTGGCCGTTACACGCTGGCGCCCGGAACCGTGG
CCTTCGTCTTACCCGAGAGTAAATGCCGACTGGTCCGGCAACAGGTGCAG
CGTAGGTCCCCTCACACAGAGTCGGCGCCtccgaaggaggaggaggaagg
aggggatgagggagaaggggaggccgagggtggagagcgcgggggcagga
gcctattgggaaaggaaggggagggactgaTCCGTCAGCGGTTCACGAAA
GCCGCCTCGGTGGGATCCAGGCATCCACCGGCTGCGCGCCAATCTCCTTC
TCAGCCCGACACGCCCCTGCTCTCGGTCCATTTTCGGTCCTACACGGGCT
ccccggagggggggaaggcgggagggttggggggaggtgcaggTGCTCTG
AAGCCACGCCGGTCGCTTTCGCATGCTGCGGGTGGGCAGCATCATCGCAC
CATTGGAGGTTACAATTTGGTGGACCCGTTGCCCTTTGATAGGagcgggg
aaaaaggcaacccggaagaagacgtggcggaggagcagccgcCATGGCAA
GaagctgaggaggaaagcgggttGAGGATGCGACGACGCCGACCTTCGCC
TCCGCTGGGCATTGTGGGTGCCCCCATGGCATTGTACGGCAATTCTCCTC
TAGCGGGGTCGGCAGGGGGTTTTGAAAGTAGTGAgctgaggagaaggaac
agcGCATCATCGGatcaggggagggaaggagatggacgcGGGAataggga
tggaggaggggacatggACGCCGCGGAGTCGACTGAAATTCGTCTGAGCC
GAAGTCTCTCAAAAAGCGGGGGTTCTAAGGGAGTGTGAGGTGGACATGGA
TGTGAAGAGCAGCGATGGGAAtagaaggaagaaggcggaaaaTGATGAGG
CGCAGGAAGCGTGCATGCAGCACCGAGAGGGATAGACGGAGAAATAGAAG
AGAAAATTACCGAACAGAAGCATGGAAATTTCAAAATTTCGTTGATGTAT
GTGTACATGGAAAGCACCGACGCGAAAAATTGTCAGGGGACAAAAACCAG
GGTGATAGATGAAGACGATAGGGTTCAGTATAGagatgagg back to topCoding sequence (CDS) from alignment at KK037250.1:42409..44299+ >rna8736 ID=rna8736|Name=rna8736|organism=Nannochloropsis gaditana|type=CDS|length=1638bp|location=Sequence derived from alignment at KK037250.1:42409..44299+ (Nannochloropsis gaditana)
GAAGAATTGTTGAGGTCGCTGTGGtgggtggtggcggccctGGAGTTGAA
gcaagagggtgggagggagggcggggaggagggcgggagggagggcggga
gggagggcgtcgcTCTCCAGGAATGCTCGCTGGCACAACTGGCGTCTCTT
TTGGGCGAGGCGACGCTTTTGCACCTCCCTGAAggtggacagggagggag
ggagggagggagggagactaTGCGCCGGATGAACCTGAGGACGCtgacaa
ggggggggacctTGAGGAACTTGCTGCCTCTGACCGGACGGGTGccgaac
gagggagggagggagggtgggagggagggaaagaaggatggATTGGTGGA
GATGACGATGGGGGCGCCCGGGACGTCTTTGGCAAGTCAGTTCCAGGAAG
CcttgcagcagcaacaacagcaaccaCAGCAAccgcaacagcaacagcag
ctgcACGAGGTGTTTGAAGCCGATGCGACCAGCCACCTGGTGCTTTTGAC
CGGGTGGATGGAGCGGGTGCATGCTGGGGgccaggacgaggcggggaaag
ggaaggagagggagagacgtcctcccctttggGGAGGTCGGGtacgagag
agggagggagggaaggaggagaaggagaagaagggcccggggggggtcAC
TGGAGCCTTGACAGCCATTTTGAGCAcggtgggcggggcaggggggggaa
agggagggacaggcgagggcgggcacggggaaGGCAGAGATGGCGGAGAC
AGTGGGACAAGGTCGCCGGCGATGCCTCTCGTGGCGCCCCCCACGGTGGT
ggtcccctacctccctgcTGGCCGTTACACGCTGGCGCCCGGAACCGTGG
CCTTCGTCTTACCCGAGAGTAAATGCCGACTGGTCCGGCAACAGGTGCAG
CGTAGGTCCCCTCACACAGAGTCGGCGCCtccgaaggaggaggaggaagg
aggggatgagggagaaggggaggccgagggtggagagcgcgggggcagga
gcctattgggaaaggaaggggagggactgaTCCGTCAGCGGTTCACGAAA
GCCGCCTCGGTGGGATCCAGGCATCCACCGGCTGCGCGCCAATCTCCTTC
TCAGCCCGACACGCCCCTGCTCTCGGTCCATTTTCGGTCCTACACGGGCT
ccccggagggggggaaggcgggagggttggggggaggtgcaggTGCTCTG
AAGCCACGCCGGTCGCTTTCGCATGCTGCGGGTGGGCAGCATCATCGCAC
CATTGGAGGTTACAATTTGGTGGACCCGTTGCCCTTTGATAGGagcgggg
aaaaaggcaacccggaagaagacgtggcggaggagcagccgcCATGGCAA
GaagctgaggaggaaagcgggttGAGGATGCGACGACGCCGACCTTCGCC
TCCGCTGGGCATTGTGGGTGCCCCCATGGCATTGTACGGCAATTCTCCTC
TAGCGGGGTCGGCAGGGGGTTTTGAAAGTAGTGAgctgaggagaaggaac
agcGCATCATCGGatcaggggagggaaggagatggacgcGGGAataggga
tggaggaggggacatggACGCCGCGGAGTCGACTGAAATTCGTCTGAGCC
GAAGTCTCTCAAAAAGCGGGGGTTCTAAGGGAGTGTGA back to top
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