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Properties
| Property Name | Value |
|---|
| Product | hbs1-like protein |
| Orig transcript id | gnl|cribi|Naga_100326g3.7806.mrna |
| Orig protein id | gnl|cribi|Naga_100326g3.7806 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:31774..34859 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8733 ID=rna8733|Name=rna8733|organism=Nannochloropsis gaditana|type=mRNA|length=3258bp
ATGGCCATACCTGGGCTTAGCCTGCCGTGGAACGTCACGCCATTATATTT
GCGTCTCATAAAGTTAAGTTATTTTCGTATTCATCACATTGTCTACATCT
CTTTGTTTTGCCTTGTGGAAATCAAGGTTGCAACAGGCACTATGGCGCCT
CCTTCTCGTTACTTTCCACCGACTGCATCCACATCTACGAGTACCTCTGG
GCAGTCTCGGTTTTCTACGTTTGAGCCTCAGGATTTGTGCCGCCCTCAAG
GTTCGCTTCACGATGGCCTTCCTCGCTCCACCCGCCGGCAAGTCCAAGCT
CCGGATCGTATTCCACAGCCCATCTATCTGGGCATTGAAGTGGAGGTACT
AGAGTCTCAGGAGGTGGTGCGGTACGGATTGTGCGCACATGACGGCTCCT
ACACGCTGGACTACTACGAGGAAACTATCGACGTTAGTCATTGCAATACG
ACGCCGGAGAAAGTTGAGTTTTTTGAAGCACATATTCTCCAGAAGCTGAA
AGAATACCAATCGAGCATGAACGTCAAGGCTCATTTAATTGGCCTGGGCC
TGCGAGTCTGTAACACCATGTGTTTTTTGAAACGGGGCTGCGCTACCATG
TGTGTGGACTACGGACGTGAACGCGTGTTCAGTGTGTACGGCTCCGACGT
ACCCTCCTTGTCTTCGCGCGTCTGGCAGGAACTTGACGCCATCCCCTTCG
TCATGCGGACACGGGGCCAAACACTGGACGAGCGCGCCAGCACCGCGGTG
CGTCAGGCGGTAGTGGCCTTATCCCCGCAATACCCCGGGAACATCCCGAG
AGTGGTGGTGGGCTACCGGAACGAGGTAGAGGTCGATTGCAACATGGACA
TCCATTTGTATGACCTGGAGCATTACCGACAATTTTGCTCGGAAGGTACC
TGGCATGCGGTGTTGGCCATGGCCGACGAGCTACGGCGGCGGCAAATCAA
GGTTTCTTACTTCAACTCCACCCCTCAAGGGGGGGGAGTGGCTTTGATGC
GCCACGCCCTGTTCCGACTGAGCCATTACCTTCGGGTGAACACGCATTGG
TTCGTGGCGACGCCGTCTCCGGATGTATTCAACATCACCAAGCGGAAATT
CCACAACGTCCTGCAGGGCGTCGCGCCCCCGAATGTCTTTTTGGAAGAGG
AAGAGAAGAAGAAGTGGCTGGAGTGGACGCAAATGAATGTGGAACGTCAC
TGGGACGACCCCGATGGACCCTTGATGACATCGGACGTGATTGTCATTGA
TGACCCGCAGGTTTGTGGCCTGATCCCGTGGATCCGACGCTTGAATCCAG
AGGCGAAGATCGTCTACCGTTCTCACATTGAAGTCCGAGCCGACCTCATC
CGCGACAACCCGCAGGGGCCGCAGGCGCAGACCTGGGACTTTCTGTGGTC
TGCGATCAAGCAAGCCGACCTCTTTGTTTCCCACCCCGTGAAGAACTTTG
TACCCGACGACGTGCCTTTGGAAAACGTGGTGATGATGCCCGCCGCCACA
GACCCGTTGGACGGATTGAATAAACCCCTGGACGACTTCAACGTCACCTA
TTATCAACAGGTTTTCAATCGTATCTGCTACGATCAGGGCTCTCGGCGCG
TAGATTGGGACCGTCCCTACATCACCCAAGTCGCGCGCTTCGACCCTTCC
AAGGGCATCCCGGACGTCCTCTTAGCCTATCATCGACTTTACTGCAAATT
TCTTGACGCGGGGGAAAAGAATCGTGTCGAGCCCCGTCGCAGCCATGGAC
AGGGCACGAAAAAGGCGGAACCTGCCAATGTGGGGGATGGCGGCCAGCAG
GAGACTGAGGAGGCGCGTGGGGAGGCTGAGTCGACAGAGGAGGACACCGG
GTGGTCTGCGCTACACAGGCAGCTTCGCATGGAGGAAACGACGCTGCCCC
AGCTCATTATTTGCGGACACGGCTCCGTGGACGATCCGGACGGGACGTGG
GTGTTTGAAGAGGCGCATACGATGCTGAACAAGGAGGACTTCCGGGACCT
CTGGCCCCACGTGACCATCGTGCGCATACCCCCTTGCGACCAGATTTTGA
ATGTGGTTTTACGGGGCGCCGTCTGCGCCTTGCAGCTCAGCCATCGCGAA
GGCTTTGAAGTGAAAGTGACGGAAGCCATGGCCAAAGGTGTGCCGGTCGT
GGCTTACAAGGCGGGGGGCATTCCTTTCCAGATCCGGGACAAGGAAAACG
GTTATCTGGCTCCGGTAGGTGATACAGAGACGGTAGCAGAGCACGTGTAT
TCCTTGTGTACGGATGCCGAGTTGAGGGAAAAGCTCTCACGGAAGGCCCG
GGAAGAGATTGGAGAAGATTTCTTTACGGTCCATAATTGGGCGAATTGGG
CCTATATTTGGCTCAAAATTAATAACAAACCTCGTGCCCCGCCCACCCTT
GAGGAGGTACTGGAGGTTAAAAAACAAACAGAAAAAGGGGAGAAAGACCA
GCAGGTCAAGCGTGATGTTGAGGAGGGGGAGGGAGGGATGGAAGGTAACG
GTGGGCGAAGCGACGAGGAGGAGACGCTGGCTGCATTGGGCGAGGTCTGT
CTGAATGTGGACGGTAGTCGCAGTCCTTGTGCGCCCCCGTTGCACCGACG
GCGCAAGGCAGCTCATGACGTGCTGGGGGGAGGGCGGTGGGTCAAGGACT
TGTGGCAGGCCGAATACGTGAAGGGCGAGACGGAAGAGGGGGTGCCACGT
TACAAAGAACTACATGCCCGTCACGTCGAGGCGCACGAGGCCAGGACGTG
GGACCGCAACACCACCCTTCGACAGGAACAATTCACGCCACCTCCCTTCT
TGATCGACCAGCGAAGAGGAAACATCGAGGGCGGTGACGACAGGCTCCCG
CGCATCGTGTACACGCCCGGGCCGAACAGCAAGCTCTGGGTCCGAGATGC
CGGCGATTTGGAGGAGGCGTGAGAAGAAAGGAATGGCCCATGTACGGAGA
GTAAGAGAAAGATAGAGGGATTGGGTTAGGGTTGACCCTAACCCGAAGCC
TACCAGAAGTATATAGCTTTGTGATGTCAGAGGGAAAATGCAGATCACCC
ACAGCGACGAAGACGGCCTCTTGGCGTGTACAGGCTTGAAAAGAGGGATG
AAGTAATGGCATGGTAGGGCATTGGAGTTGTATGGCTGGAGGCTTGCATG
GCTATCAACGACTTGCCATTCCAAGTGTCGGATATATCTTGGCATGGCAT
GTGAGGTTGTGGGAAACACTTTTTCTTGGAAACAATGCTTTTTTTGAGTG
TGTTACAA back to topprotein sequence of rna8733 >rna8733-protein ID=rna8733-protein|Name=rna8733|organism=Nannochloropsis gaditana|type=polypeptide|length=800bp
MSRHRAVRNRTYSYDDDYDDYGYEDEEEEEEEEGEGTYAYHRRQQLQGHL
PSSHGASLSSLLDHAAAQHNAPVAPILRSSQAGPRAPAQEDVKGKGTHPR
LATISEAFDADLVDPAFHMIKESGQVGEMSDDQIRTAVRQANYDADVALS
ALLLLPPSTPPATSSSSSSTPSSSQPPSAVPSRVVTPSPSRLSSPEDGGR
GGKGRGLTAGTESTASLPPPLPPGQLVRPTPQRRSSGNLLLGNQSRNNSS
SNLSRPTGSNVGEVEEVASRVQSVHLSRASPPPPRFKSVSPGLGEGEDGY
EGAQAGAGNVIASRASLGGLSKDPEVWEEDVLPSKGGGEKEGEKARIAMV
VIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMD
EDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADV
ALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAV
NKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVK
EGGREGGKEGGGGLREWYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVN
DLAPAGKNVGVSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVA
GALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVP
ILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLT
GNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAILPDA back to topmRNA from alignment at KK037250.1:31774..34859- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8733 ID=rna8733|Name=rna8733|organism=Nannochloropsis gaditana|type=mRNA|length=3086bp|location=Sequence derived from alignment at KK037250.1:31774..34859- (Nannochloropsis gaditana)
CATTTCTACCGCTCTTGATCCCTCTGTATCAGACCTCGTACTACGAACAG
GTACTACTAGTACCTCTTGCTTTCATCCGTCCCTCCATGCCCGTAGCCAC
AAATTGCTTGCTTTTGCGTCCCGTCGCCGCCCATCCGACACATCCTCAAC
CCAATGCATATCTTTCACTCGACAGATCCATTCGCCAGGCCAGCCTTAGG
CGGTCTTATGCGAAACGGTGGTCATCTACACGCAACCGAGGTCGGTCAAC
TAGGCGTGGCCAGAAGCCTCCACAACGTCATTCCCGCCACTCAGTCCCCA
ACATTTTCGAAAGACCTTCCTACGCGGTCAAGATTTTGTATTTTACTTCT
CCCGTAGCCGAGCATGTCCCGTCATCGCGCCGTCCGGAACCGGACATACA
GCTACGACGATGACTATGACGACTATGGGTACGAAGACGAAGAGGAGGAA
GAGGAGGAAGAAGGCGAAGGTACCTATGCGTACCACCGTCGTCAGCAGCT
CCAGGGCCACCTACCTAGCAGCCATGGGGCCTCCTTGTCCTCCCTTTTGG
ACCACGCGGCGGCCCAACACAACGCACCGGTCGCTCCAATATTACGAAGC
TCACAAGCCGGACCCCGGGCCCCAGCCCAGGAAGACGTTAAAGGCAAAGG
CACACATCCGCGCCTGGCGACCATCTCCGAAGCTTTCGACGCCGATTTAG
TGGACCCGGCTTTCCATATGATCAAGGAAAGCGGACAAGTTGGGGAAATG
TCGGACGACCAGATTCGTACGGCCGTGCGTCAAGCCAACTACGACGCAGA
CGTTGCCCTGTCCGCCCTCCTCCTCCTTCCCCCATCCACCCCCCCCGCCA
CCTCCTCATCCTCCTCCTCCACCCCTTCCTCCTCTCAACCTCCCTCGGCT
GTCCCATCCCGGGTCGTGACGCCCTCTCCGTCCCGCCTTAGTTCGCCGGA
GGATGGGGGAAGGGGAGGAAAAGGAAGAGGGTTGACGGCAGGGACGGAGA
GCACTGCTTCCCTCCCTCCACCCCTCCCTCCCGGGCAATTGGTACGGCCC
ACACCTCAACGGCGGTCGAGCGGGAATCTGTTGTTGGGGAACCAGAGCAG
GAACAACAGCAGCAGCAATTTGAGCCGACCCACCGGCAGCAACGTCGGGG
AGGTTGAGGAGGTGGCCAGCCGCGTGCAGAGCGTGCACCTATCGCGGGCC
TCCCCCCCCCCTCCTCGCTTCAAGAGCGTCTCGCCTGGTCTTGGAGAAGG
AGAGGACGGGTACGAGGGAGCGCAGGCAGGCGCGGGGAACGTGATCGCCT
CCCGGGCGTCTCTGGGCGGGCTGTCAAAGGATCCCGAGGTGTGGGAGGAG
GACGTCTTGCCCTCCAAAGGAGGGGGAGAGAAGGAGGGGGAGAAGGCACG
GATCGCGATGGTGGTGATCGGGCATGTGGATGCGGGGAAGTCGACCTTAA
TGGGCCAGGTGTTGGTCTCCACCGGGATGGTGTCGGTGCGGGAAGCTCGA
AAATTCGAACGGGACGCCCGGGCCCTCGGCAAAGCTTCTTTTTACTTGGC
TTGGATGATGGACGAAGACGGGGAAGAGCGCGCGCATGGCGTGACGATGG
AAGTGGGCCAAAAATGCATCGAACTCCCCCACCGGGTCGTCACCCTCTTA
GACGCCCCCGGACACGCCGACTTTGTCCCGCAAATGATCGTGGGGGCGGC
CCAGGCGGACGTTGCCTTGTTGGTCGTGCCCGCGACGACGGGGGAATTTG
AAGCCGGTTTCGCCGAGGCGGGCACCGGTCGCGACGGCCTCAGCCAGGGC
CAAACCAAGGAGCACGCCCTGCTGGCACGGGCGTTGGGGGTGAACCAACT
TCTGGTGGCGGTGAACAAACTCGACGCGGCGGACCCGCCCTGGTCCCAGG
CCCGATACCAGGATATCGTCACAAGCTTGACGCCTTTCCTGGAGCAGACC
GGGTTCAAGTCCGAACGGATTCGGTTCGTACCTGTAAGTGGGCTGACGGG
GGAGAACGTGAAGGAGGGAGGGCGGGAGGGAGGGAAGGAAGGAGGGGGGG
GGCTGCGCGAGTGGTACACGGGCCCGTCCTTGTTGACGGCCATGGACGAC
TTCCTGCCCGCCGCCAAATTTTTGCGGGAAGCACGGGGGAAACCGCTGCG
CATGATCGTGAACGACCTGGCGCCTGCCGGGAAGAATGTGGGTGTCTCGG
TTCGAGTCCTCTCGGGTGGGGTCAAAACCGGCTCCAAAGTCCTGATCCTC
CCCATTGGGGACGTGGCTGTTGTGCGAAGCATCGAGGTGGAGGGTAGTCC
GGCCGAGGTGGCTGGGGCCTTGGAGCACGCGGAGATCACGTTGCAAGGGG
TGGATCCAGCCCGGATATCGATTGGGAGTGTCTTGTGTAAAGGGAAAGCC
GCCGTGCCGGTTTCGTGTCGTTTCGCCGCCCAGATCACCACGTTATCCTC
CTTGAGCGTGCCCATTTTGCGGGGCACGCCTTTTCAAATGCATGTGCAAA
GTCTGGAGATCCCCGTGAATGCGACGCGTCTCACGGCTACCCTGGCCAAG
CCCCTGTCGGAGGAGGGGCGGGGGGCGGCCGAGGTCAAGAAGGAGCGCCC
TCGGTGTCTAACAGGGAACATGCTGGCCTTGGTCGAGTTTCAATGCGCTC
GGCCCGTGTGTGTGGAGCGTTTTGAGGATTCGCGGCCGCTGGGTCGATTC
ATCCTCCGACAAAAGGGGGAAACGGTTGCGGTGGGGATCGTGACGGCAAT
CCTCCCAGATGCATAAGCGGGGAGGTGCGTCAGCGGGGAAGGAAGGAAGG
AAAGGGGGAGACGGACAAAGAGGCGAAGAAAAGAGGCCCTTGGGGGATTT
GTAACACACTCAAAAAAAGCATTGTTTCCAAGAAAAAGTGTTTCCCACAA
CCTCACATGCCATGCCAAGATATATCCGACACTTGGAATGGCAAGTCGTT
GATAGCCATGCAAGCCTCCAGCCATACAACTCCAATGCCCTACCATGCCA
TTACTTCATCCCTCTTTTCAAGCCTGTACACGCCAAGAGGCCGTCTTCGT
CGCTGTGGGTGATCTGCATTTTCCCTCTGACATCAC back to topCoding sequence (CDS) from alignment at KK037250.1:31774..34859- >rna8733 ID=rna8733|Name=rna8733|organism=Nannochloropsis gaditana|type=CDS|length=2403bp|location=Sequence derived from alignment at KK037250.1:31774..34859- (Nannochloropsis gaditana)
ATGTCCCGTCATCGCGCCGTCCGGAACCGGACATACAGCTACGACGATGA
CTATGACGACTATGGGTACGAAGACGAAGAGGAGGAAGAGGAGGAAGAAG
GCGAAGGTACCTATGCGTACCACCGTCGTCAGCAGCTCCAGGGCCACCTA
CCTAGCAGCCATGGGGCCTCCTTGTCCTCCCTTTTGGACCACGCGGCGGC
CCAACACAACGCACCGGTCGCTCCAATATTACGAAGCTCACAAGCCGGAC
CCCGGGCCCCAGCCCAGGAAGACGTTAAAGGCAAAGGCACACATCCGCGC
CTGGCGACCATCTCCGAAGCTTTCGACGCCGATTTAGTGGACCCGGCTTT
CCATATGATCAAGGAAAGCGGACAAGTTGGGGAAATGTCGGACGACCAGA
TTCGTACGGCCGTGCGTCAAGCCAACTACGACGCAGACGTTGCCCTGTCC
GCCCTCCTCCTCCTTCCCCCATCCACCCCCCCCGCCACCTCCTCATCCTC
CTCCTCCACCCCTTCCTCCTCTCAACCTCCCTCGGCTGTCCCATCCCGGG
TCGTGACGCCCTCTCCGTCCCGCCTTAGTTCGCCGGAGGATGGGGGAAGG
GGAGGAAAAGGAAGAGGGTTGACGGCAGGGACGGAGAGCACTGCTTCCCT
CCCTCCACCCCTCCCTCCCGGGCAATTGGTACGGCCCACACCTCAACGGC
GGTCGAGCGGGAATCTGTTGTTGGGGAACCAGAGCAGGAACAACAGCAGC
AGCAATTTGAGCCGACCCACCGGCAGCAACGTCGGGGAGGTTGAGGAGGT
GGCCAGCCGCGTGCAGAGCGTGCACCTATCGCGGGCCTCCCCCCCCCCTC
CTCGCTTCAAGAGCGTCTCGCCTGGTCTTGGAGAAGGAGAGGACGGGTAC
GAGGGAGCGCAGGCAGGCGCGGGGAACGTGATCGCCTCCCGGGCGTCTCT
GGGCGGGCTGTCAAAGGATCCCGAGGTGTGGGAGGAGGACGTCTTGCCCT
CCAAAGGAGGGGGAGAGAAGGAGGGGGAGAAGGCACGGATCGCGATGGTG
GTGATCGGGCATGTGGATGCGGGGAAGTCGACCTTAATGGGCCAGGTGTT
GGTCTCCACCGGGATGGTGTCGGTGCGGGAAGCTCGAAAATTCGAACGGG
ACGCCCGGGCCCTCGGCAAAGCTTCTTTTTACTTGGCTTGGATGATGGAC
GAAGACGGGGAAGAGCGCGCGCATGGCGTGACGATGGAAGTGGGCCAAAA
ATGCATCGAACTCCCCCACCGGGTCGTCACCCTCTTAGACGCCCCCGGAC
ACGCCGACTTTGTCCCGCAAATGATCGTGGGGGCGGCCCAGGCGGACGTT
GCCTTGTTGGTCGTGCCCGCGACGACGGGGGAATTTGAAGCCGGTTTCGC
CGAGGCGGGCACCGGTCGCGACGGCCTCAGCCAGGGCCAAACCAAGGAGC
ACGCCCTGCTGGCACGGGCGTTGGGGGTGAACCAACTTCTGGTGGCGGTG
AACAAACTCGACGCGGCGGACCCGCCCTGGTCCCAGGCCCGATACCAGGA
TATCGTCACAAGCTTGACGCCTTTCCTGGAGCAGACCGGGTTCAAGTCCG
AACGGATTCGGTTCGTACCTGTAAGTGGGCTGACGGGGGAGAACGTGAAG
GAGGGAGGGCGGGAGGGAGGGAAGGAAGGAGGGGGGGGGCTGCGCGAGTG
GTACACGGGCCCGTCCTTGTTGACGGCCATGGACGACTTCCTGCCCGCCG
CCAAATTTTTGCGGGAAGCACGGGGGAAACCGCTGCGCATGATCGTGAAC
GACCTGGCGCCTGCCGGGAAGAATGTGGGTGTCTCGGTTCGAGTCCTCTC
GGGTGGGGTCAAAACCGGCTCCAAAGTCCTGATCCTCCCCATTGGGGACG
TGGCTGTTGTGCGAAGCATCGAGGTGGAGGGTAGTCCGGCCGAGGTGGCT
GGGGCCTTGGAGCACGCGGAGATCACGTTGCAAGGGGTGGATCCAGCCCG
GATATCGATTGGGAGTGTCTTGTGTAAAGGGAAAGCCGCCGTGCCGGTTT
CGTGTCGTTTCGCCGCCCAGATCACCACGTTATCCTCCTTGAGCGTGCCC
ATTTTGCGGGGCACGCCTTTTCAAATGCATGTGCAAAGTCTGGAGATCCC
CGTGAATGCGACGCGTCTCACGGCTACCCTGGCCAAGCCCCTGTCGGAGG
AGGGGCGGGGGGCGGCCGAGGTCAAGAAGGAGCGCCCTCGGTGTCTAACA
GGGAACATGCTGGCCTTGGTCGAGTTTCAATGCGCTCGGCCCGTGTGTGT
GGAGCGTTTTGAGGATTCGCGGCCGCTGGGTCGATTCATCCTCCGACAAA
AGGGGGAAACGGTTGCGGTGGGGATCGTGACGGCAATCCTCCCAGATGCA
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