EWM21968.1, cds8704 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|585102333|gb|EWM21968.1| (hbs1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1613.2 bits (4176), Expect = 0.000e+0 Identity = 800/800 (100.00%), Postives = 800/800 (100.00%), Query Frame = 0 Query: 1 MSRHRAVRNRTYSYDDDYDDYGYEDEEEEEEEEGEGTYAYHRRQQLQGHLPSSHGASLSSLLDHAAAQHNAPVAPILRSSQAGPRAPAQEDVKGKGTHPRLATISEAFDADLVDPAFHMIKESGQVGEMSDDQIRTAVRQANYDADVALSALLLLPPSTPPATSSSSSSTPSSSQPPSAVPSRVVTPSPSRLSSPEDGGRGGKGRGLTAGTESTASLPPPLPPGQLVRPTPQRRSSGNLLLGNQSRNNSSSNLSRPTGSNVGEVEEVASRVQSVHLSRASPPPPRFKSVSPGLGEGEDGYEGAQAGAGNVIASRASLGGLSKDPEVWEEDVLPSKGGGEKEGEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLREWYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVGVSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAILPDA 800 MSRHRAVRNRTYSYDDDYDDYGYEDEEEEEEEEGEGTYAYHRRQQLQGHLPSSHGASLSSLLDHAAAQHNAPVAPILRSSQAGPRAPAQEDVKGKGTHPRLATISEAFDADLVDPAFHMIKESGQVGEMSDDQIRTAVRQANYDADVALSALLLLPPSTPPATSSSSSSTPSSSQPPSAVPSRVVTPSPSRLSSPEDGGRGGKGRGLTAGTESTASLPPPLPPGQLVRPTPQRRSSGNLLLGNQSRNNSSSNLSRPTGSNVGEVEEVASRVQSVHLSRASPPPPRFKSVSPGLGEGEDGYEGAQAGAGNVIASRASLGGLSKDPEVWEEDVLPSKGGGEKEGEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLREWYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVGVSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAILPDA Sbjct: 1 MSRHRAVRNRTYSYDDDYDDYGYEDEEEEEEEEGEGTYAYHRRQQLQGHLPSSHGASLSSLLDHAAAQHNAPVAPILRSSQAGPRAPAQEDVKGKGTHPRLATISEAFDADLVDPAFHMIKESGQVGEMSDDQIRTAVRQANYDADVALSALLLLPPSTPPATSSSSSSTPSSSQPPSAVPSRVVTPSPSRLSSPEDGGRGGKGRGLTAGTESTASLPPPLPPGQLVRPTPQRRSSGNLLLGNQSRNNSSSNLSRPTGSNVGEVEEVASRVQSVHLSRASPPPPRFKSVSPGLGEGEDGYEGAQAGAGNVIASRASLGGLSKDPEVWEEDVLPSKGGGEKEGEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLREWYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVGVSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAILPDA 800
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|553189419|ref|XP_005854998.1| (hbs1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294063|gb|EKU21363.1| hbs1-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 496.123 bits (1276), Expect = 7.663e-169 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0 Query: 554 REGGKEGGGGLREWYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVGVSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAILPDA 800 REGGKEGGGGLREWYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVGVSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAILPDA Sbjct: 1 REGGKEGGGGLREWYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVGVSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAILPDA 247
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|299116307|emb|CBN76113.1| (HBS1, eRF3-like GTPase involved in mRNA [Ectocarpus siliculosus]) HSP 1 Score: 446.432 bits (1147), Expect = 8.931e-142 Identity = 236/452 (52.21%), Postives = 310/452 (68.58%), Query Frame = 0 Query: 342 GEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLREWYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVGVSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIV 793 G K R+AMVVIGHVDAGKSTLMGQVLV G V+ R K E++AR GKASF+LAW+MDED EERAHGVT+EV QK IE ++VTLLDAPGH DF+P+MI GA+ AD A+LVVPA GEFE+GF + GQTKEHA+LA+ALGVNQLLV VNKLDA DPPWS+ARY+ + + PFL +TGF+ +++RF+P SGL+ ENV + + GG L WY GP+LL A+D F A + A K RM V D+ +GK V VS RV+ G +++G KV+++P+ D A +E G+PA A A ++AE+TL GVDP+R+ +G+V+CK +PV RF AQI L +L VPI++GT FQ+H+ +L++ V+ ++L + A V K RPRC+ A + C RP+C+E++ D R LGRF+LRQKG TVAVG+V Sbjct: 363 GGKERLAMVVIGHVDAGKSTLMGQVLVQMGQVTQRALHKQEKEAREAGKASFFLAWVMDEDQEERAHGVTIEVAQKHIETETKLVTLLDAPGHRDFIPKMISGASAADAAVLVVPAAVGEFESGFQ---------ANGQTKEHAMLAKALGVNQLLVVVNKLDATDPPWSEARYEAVKAEVGPFLARTGFRPKKVRFLPASGLSAENVSK------RTEGGPLSSWYDGPTLLEAIDSFQAAPR----ATDKAFRMCVADVTSSGKGVSVSGRVVQGRLRSGDKVVVMPLEDPATAARLERNGAPARTARAGDNAEVTLSGVDPSRVVVGNVVCKAGGVLPVVRRFNAQIVALPALEVPIIKGTEFQLHMHNLDVMVHCSKLVSLT--------NTAGTVLKARPRCVPTGSTAHIRITCQRPICLEKYGDCRALGRFVLRQKGATVAVGLV 787
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|1173950208|gb|OQR98185.1| (translation elongation factor 1-alpha [Achlya hypogyna]) HSP 1 Score: 400.593 bits (1028), Expect = 4.178e-126 Identity = 224/497 (45.07%), Postives = 310/497 (62.37%), Query Frame = 0 Query: 311 IASRASLGGLSKDP---EVWE--EDVLPSKGGGEKEGE---KARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLREWYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVG--VSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAIL 797 +AS SLGG S P +E E K G E K +I+MVVIGHVDAGKST+ G +L S G VS + K+E+ +R GK+SF AW+MD D EER GVTM+VG + P + VTLLDAPGH DF+P+MI GA+QADVA+LVVPA TGEFE F + GQTKEH LL R+LGV QL+VAVNK+DA WS+ R+ IV +LT FL+Q+GFK E++RFVPVSGL+G N+ WYTGP+L+ A+D F P + + KP RM ++D++ + ++G VS R+ +G V TG +L++P G V+ +E G +A A ++ ++ + G+DP+ +S+G++LC + + + RF AQI T+ ++ VP+++G HV S++ PVN TRL + L K + EV+K++PRC+T N A+V+ C RP+C+E F D R LGRF LR +G T+A GIVT IL Sbjct: 159 VASATSLGGYSLTPLERAAFEKAEKASQDKCLGAMTAEADAKHKISMVVIGHVDAGKSTITGHLLFSLGYVSKQVMHKYEKQSREAGKSSFAFAWVMDADEEERLRGVTMDVGTSYFQTPTKHVTLLDAPGHRDFIPKMIAGASQADVAVLVVPAATGEFEGAF---------MKDGQTKEHTLLVRSLGVTQLIVAVNKMDAV--AWSKDRFDFIVETLTAFLQQSGFKLEQLRFVPVSGLSGGNLIAPLPAADC-------TWYTGPTLVGAIDGFYPPQRPIT----KPFRMGISDISKS-MSLGQTVSGRIYTGAVSTGDTLLLMPGGLRLTVKGMEQNGGSITMASAGDNVDLGVTGIDPSALSVGNILCSIASPIKLVRRFEAQIMTMPAVEVPLVKGAYMTFHVHSIDEPVNITRLVSILKK--------SGEVEKKKPRCITRNCSAVVQITCQRPICLELFADFRQLGRFTLRDRGSTLAAGIVTEIL 624
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|970643061|gb|KUF84470.1| (HBS1 protein [Phytophthora nicotianae]) HSP 1 Score: 398.667 bits (1023), Expect = 1.730e-125 Identity = 206/462 (44.59%), Postives = 302/462 (65.37%), Query Frame = 0 Query: 340 KEGEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLRE--WYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVG--VSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAIL 797 + G K +I+MVVIGHVDAGKST+ G +L G VS R K+E+++R GK+SF AW+MD D EER+ GVTM+VG E + VTLLDAPGH DF+P+MI GAAQADVA+LVVPA TGEFEA F + GQTKEH LL R+LGV+Q++VAVNK+D + W + R+ +IVTSL+ FL+ GF+ + +RFVP+SG+TG N+ E GG++E WY+GPSL+ A+D F P + + KP RM V+D++ + ++G +S RV +G G L++PIG V+ +E +G +A A + E+ + G+DP+ ++ GS+LC + V ++ +F A+I T+ ++ VP+++GT +H+ +++ PVN TRL + L+K EV+K++PRC+T A+V+ C R +C+E F + R LGRF LR +G+T+A GI+T I+ Sbjct: 195 RTGGKTKISMVVIGHVDAGKSTITGHLLYKLGYVSKRLMHKYEKESREAGKSSFAYAWVMDADDEERSRGVTMDVGTSHFETDTKHVTLLDAPGHRDFIPKMIAGAAQADVAVLVVPAVTGEFEAAFENS---------GQTKEHTLLVRSLGVSQMVVAVNKMDMVN--WDKERFDNIVTSLSMFLQGAGFRPKNLRFVPLSGMTGANL---------EKTGGVKECSWYSGPSLVEAIDTFAPPQRQI----SKPFRMTVSDVSKS-MSLGQTISGRVYAGAAAVGDSFLLMPIGLTLTVKGMEQDGKSCTLARAGDTIEMGVTGIDPSALTTGSILCSIASPVQLAKKFEAKIMTMPAVEVPLVKGTYVTIHMHNVDEPVNITRLVSMLSK--------TGEVEKKKPRCITRERSAVVQITCHRKICLEEFANYRQLGRFTLRDRGKTLAAGIITQII 623
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|567955443|gb|ETK81076.1| (translation elongation factor Tu [Phytophthora parasitica] >gi|567984117|gb|ETL34494.1| translation elongation factor Tu [Phytophthora parasitica] >gi|570945496|gb|ETP10753.1| translation elongation factor Tu [Phytophthora parasitica CJ01A1]) HSP 1 Score: 399.053 bits (1024), Expect = 3.710e-125 Identity = 206/462 (44.59%), Postives = 302/462 (65.37%), Query Frame = 0 Query: 340 KEGEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLRE--WYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVG--VSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAIL 797 + G K +I+MVVIGHVDAGKST+ G +L G VS R K+E+++R GK+SF AW+MD D EER+ GVTM+VG E + VTLLDAPGH DF+P+MI GAAQADVA+LVVPA TGEFEA F + GQTKEH LL R+LGV+Q++VAVNK+D + W + R+ +IVTSL+ FL+ GF+ + +RFVP+SG+TG N+ E GG++E WY+GPSL+ A+D F P + + KP RM V+D++ + ++G +S RV +G G L++PIG V+ +E +G +A A + E+ + G+DP+ ++ GS+LC + V ++ +F A+I T+ ++ VP+++GT +H+ +++ PVN TRL + L+K EV+K++PRC+T A+V+ C R +C+E F + R LGRF LR +G+T+A GI+T I+ Sbjct: 230 RTGGKTKISMVVIGHVDAGKSTITGHLLYKLGYVSKRLMHKYEKESREAGKSSFAYAWVMDADDEERSRGVTMDVGTSHFETDTKHVTLLDAPGHRDFIPKMIAGAAQADVAVLVVPAVTGEFEAAFENS---------GQTKEHTLLVRSLGVSQMVVAVNKMDMVN--WDKERFDNIVTSLSMFLQGAGFRPKNLRFVPLSGMTGANL---------EKTGGVKECSWYSGPSLVEAIDTFAPPQRQI----SKPFRMTVSDVSKS-MSLGQTISGRVYAGAAAVGDSFLLMPIGLTLTVKGMEQDGKSCTLARAGDTIEMGVTGIDPSALTTGSILCSIASPVQLAKKFEAKIMTMPAVEVPLVKGTYVTIHMHNVDEPVNITRLVSMLSK--------TGEVEKKKPRCITRERSAVVQITCHRKICLEEFANYRQLGRFTLRDRGKTLAAGIITQII 658
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|570321697|gb|ETO69645.1| (translation elongation factor Tu [Phytophthora parasitica P1976]) HSP 1 Score: 399.053 bits (1024), Expect = 4.172e-125 Identity = 206/462 (44.59%), Postives = 302/462 (65.37%), Query Frame = 0 Query: 340 KEGEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLRE--WYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVG--VSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAIL 797 + G K +I+MVVIGHVDAGKST+ G +L G VS R K+E+++R GK+SF AW+MD D EER+ GVTM+VG E + VTLLDAPGH DF+P+MI GAAQADVA+LVVPA TGEFEA F + GQTKEH LL R+LGV+Q++VAVNK+D + W + R+ +IVTSL+ FL+ GF+ + +RFVP+SG+TG N+ E GG++E WY+GPSL+ A+D F P + + KP RM V+D++ + ++G +S RV +G G L++PIG V+ +E +G +A A + E+ + G+DP+ ++ GS+LC + V ++ +F A+I T+ ++ VP+++GT +H+ +++ PVN TRL + L+K EV+K++PRC+T A+V+ C R +C+E F + R LGRF LR +G+T+A GI+T I+ Sbjct: 230 RTGGKTKISMVVIGHVDAGKSTITGHLLYKLGYVSKRLMHKYEKESREAGKSSFAYAWVMDADDEERSRGVTMDVGTSHFETDTKHVTLLDAPGHRDFIPKMIAGAAQADVAVLVVPAVTGEFEAAFENS---------GQTKEHTLLVRSLGVSQMVVAVNKMDMVN--WDKERFDNIVTSLSMFLQGAGFRPKNLRFVPLSGMTGANL---------EKTGGVKECSWYSGPSLVEAIDTFAPPQRQI----SKPFRMTVSDVSKS-MSLGQTISGRVYAGAAAVGDSFLLMPIGLTLTVKGMEQDGKSCTLARAGDTIEMGVTGIDPSALTTGSILCSIASPVQLAKKFEAKIMTMPAVEVPLVKGTYVTIHMHNVDEPVNITRLVSMLSK--------TGEVEKKKPRCITRERSAVVQITCHRKICLEEFANYRQLGRFTLRDRGKTLAAGIITQII 658
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|566018061|gb|ETI40972.1| (translation elongation factor Tu [Phytophthora parasitica P1569] >gi|568013570|gb|ETL87747.1| translation elongation factor Tu [Phytophthora parasitica] >gi|570977251|gb|ETP38895.1| translation elongation factor Tu [Phytophthora parasitica P10297]) HSP 1 Score: 399.053 bits (1024), Expect = 4.353e-125 Identity = 206/462 (44.59%), Postives = 302/462 (65.37%), Query Frame = 0 Query: 340 KEGEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLRE--WYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVG--VSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAIL 797 + G K +I+MVVIGHVDAGKST+ G +L G VS R K+E+++R GK+SF AW+MD D EER+ GVTM+VG E + VTLLDAPGH DF+P+MI GAAQADVA+LVVPA TGEFEA F + GQTKEH LL R+LGV+Q++VAVNK+D + W + R+ +IVTSL+ FL+ GF+ + +RFVP+SG+TG N+ E GG++E WY+GPSL+ A+D F P + + KP RM V+D++ + ++G +S RV +G G L++PIG V+ +E +G +A A + E+ + G+DP+ ++ GS+LC + V ++ +F A+I T+ ++ VP+++GT +H+ +++ PVN TRL + L+K EV+K++PRC+T A+V+ C R +C+E F + R LGRF LR +G+T+A GI+T I+ Sbjct: 230 RTGGKTKISMVVIGHVDAGKSTITGHLLYKLGYVSKRLMHKYEKESREAGKSSFAYAWVMDADDEERSRGVTMDVGTSHFETDTKHVTLLDAPGHRDFIPKMIAGAAQADVAVLVVPAVTGEFEAAFENS---------GQTKEHTLLVRSLGVSQMVVAVNKMDMVN--WDKERFDNIVTSLSMFLQGAGFRPKNLRFVPLSGMTGANL---------EKTGGVKECSWYSGPSLVEAIDTFAPPQRQI----SKPFRMTVSDVSKS-MSLGQTISGRVYAGAAAVGDSFLLMPIGLTLTVKGMEQDGKSCTLARAGDTIEMGVTGIDPSALTTGSILCSIASPVQLAKKFEAKIMTMPAVEVPLVKGTYVTIHMHNVDEPVNITRLVSMLSK--------TGEVEKKKPRCITRERSAVVQITCHRKICLEEFANYRQLGRFTLRDRGKTLAAGIITQII 658
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|568043723|gb|ETM40994.1| (translation elongation factor Tu [Phytophthora parasitica]) HSP 1 Score: 396.741 bits (1018), Expect = 1.179e-124 Identity = 206/462 (44.59%), Postives = 301/462 (65.15%), Query Frame = 0 Query: 340 KEGEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLRE--WYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVG--VSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAIL 797 + G K +I+MVVIGHVDAGKST+ G +L G VS R K+E+++R GK+SF AW+MD D EER+ GVTM+VG E + VTLLDAPGH DF+P+MI GAAQADVA+LVVPA TGEFEA F + GQTKEH LL R+LGV+Q++VAVNK+D + W + R+ +IVTSL+ FL+ GF+ + +RFVP+SG+TG N+ E GG++E WY+GPSL+ A+D F P + + KP RM V+D++ + ++G +S RV +G G L++PIG V+ +E +G +A A + E+ + G+DP+ + GS+LC + V ++ +F A+I T+ ++ VP+++GT +H+ +++ PVN TRL + L+K EV+K++PRC+T A+V+ C R +C+E F + R LGRF LR +G+T+A GI+T I+ Sbjct: 195 RTGGKTKISMVVIGHVDAGKSTITGHLLYKLGYVSKRLMHKYEKESREAGKSSFAYAWVMDADDEERSRGVTMDVGTSHFETDTKHVTLLDAPGHRDFIPKMIAGAAQADVAVLVVPAVTGEFEAAFENS---------GQTKEHTLLVRSLGVSQMVVAVNKMDMVN--WDKERFDNIVTSLSMFLQGAGFRPKNLRFVPLSGMTGANL---------EKTGGVKECSWYSGPSLVEAIDTFAPPQRQI----SKPFRMTVSDVSKS-MSLGQTISGRVYAGAAAVGDSFLLMPIGLTLTVKGMEQDGKSCTLARAGDTIEMGVTGIDPSALITGSILCSIASPVQLAKKFEAKIMTMPAVEVPLVKGTYVTIHMHNVDEPVNITRLVSMLSK--------TGEVEKKKPRCITRERSAVVQITCHRKICLEEFANYRQLGRFTLRDRGKTLAAGIITQII 623
BLAST of EWM21968.1 vs. NCBI_GenBank
Match: gi|675171449|ref|XP_008894609.1| (translation elongation factor Tu [Phytophthora parasitica INRA-310] >gi|568106111|gb|ETN20747.1| translation elongation factor Tu [Phytophthora parasitica INRA-310]) HSP 1 Score: 397.512 bits (1020), Expect = 1.445e-124 Identity = 206/462 (44.59%), Postives = 302/462 (65.37%), Query Frame = 0 Query: 340 KEGEKARIAMVVIGHVDAGKSTLMGQVLVSTGMVSVREARKFERDARALGKASFYLAWMMDEDGEERAHGVTMEVGQKCIELPHRVVTLLDAPGHADFVPQMIVGAAQADVALLVVPATTGEFEAGFAEAGTGRDGLSQGQTKEHALLARALGVNQLLVAVNKLDAADPPWSQARYQDIVTSLTPFLEQTGFKSERIRFVPVSGLTGENVKEGGREGGKEGGGGLRE--WYTGPSLLTAMDDFLPAAKFLREARGKPLRMIVNDLAPAGKNVG--VSVRVLSGGVKTGSKVLILPIGDVAVVRSIEVEGSPAEVAGALEHAEITLQGVDPARISIGSVLCKGKAAVPVSCRFAAQITTLSSLSVPILRGTPFQMHVQSLEIPVNATRLTATLAKPLSEEGRGAAEVKKERPRCLTGNMLALVEFQCARPVCVERFEDSRPLGRFILRQKGETVAVGIVTAIL 797 + G K +I+MVVIGHVDAGKST+ G +L G VS R K+E+++R GK+SF AW+MD D EER+ GVTM+VG E + VTLLDAPGH DF+P+MI GAAQADVA+LVVPA TGEFEA F + GQTKEH LL R+LGV+Q++VAVNK+D + W + R+ +IVTSL+ FL+ GF+ + +RFVP+SG+TG N+ E GG++E WY+GPSL+ A+D F P + + KP RM V+D++ + ++G +S RV +G G L++PIG V+ +E +G +A A + E+ + G+DP+ ++ GS+LC + V ++ +F A+I T+ ++ VP+++GT +H+ +++ PVN TRL + L+K EV+K++PRC+T A+V+ C R +C+E F + R LGRF LR +G+T+A GI+T I+ Sbjct: 231 RTGGKTKISMVVIGHVDAGKSTITGHLLYKLGYVSKRLMHKYEKESREAGKSSFAYAWVMDADDEERSRGVTMDVGTSHFETDTKHVTLLDAPGHRDFIPKMIAGAAQADVAVLVVPAVTGEFEAAFENS---------GQTKEHTLLVRSLGVSQMVVAVNKMDMVN--WDKERFDNIVTSLSMFLQGAGFRPKNLRFVPLSGMTGANL---------EKTGGVKECSWYSGPSLVEAIDTFAPPQRQI----SKPFRMTVSDVSKS-MSLGQTISGRVYAGAAAVGDSFLLMPIGLTLTVKGMEQDGKSCTLARAGDTIEMGVTGIDPSALTTGSILCSIASPVQLAKKFEAKIMTMPAVEVPLVKGTYVTIHMHNVDEPVNITRLVSMLSK--------TGEVEKKKPRCITRERSAVVQITCHRKICLEEFANYRQLGRFTLRDRGKTLAAGIITQII 659 The following BLAST results are available for this feature:
BLAST of EWM21968.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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