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Properties
| Property Name | Value |
|---|
| Product | beta- gba2 type family protein |
| Orig transcript id | gnl|cribi|Naga_100017g64.346.mrna |
| Orig protein id | gnl|cribi|Naga_100017g64.346 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:612515..615765 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna872 ID=rna872|Name=rna872|organism=Nannochloropsis gaditana|type=mRNA|length=1971bp
TCCTTTAACGCGCGTCGCGCTTATTAACCATTACCATGTGTACACAGGCT
GAGGTTGGGCAATCACTTGAGATAGCAATGACCAGCGAGACTTCATGCAA
GGGTCCCGGTGAACCAAATTATTGCAAGCAGTATGTAATAGTAGGAGGAG
GCATCGCAGGTTGTACAGCAGCAGAGGATTTGCTTGAAATCGTCTCCCCG
GAGGAAGTAAAGGTGACCTTGATCACAGCCACCCCGATCGTCAAGCACGT
GGGCAAGGTGGTGCAAGTGACGAGAAAGCTGGAGGACATGGAGGTCGTAC
AACGGGATGCAAATGCGTTCGGAGAGGAGCATGCTAATTTGCGGATAGTA
CAGGCGAACGTCAAGTCTGTGGACGTGCACAACCACAGAATAGAATGCGA
GAATGATAGCTTTCTTCCCTTTGACCGATGTCTTATTTGCACGGGCGCAG
CACCGAAGATTGTGTCGGAGCATCCACACGTTGTGGGCATTCGTGACACA
GAAAGCGTGAAGGACGTGGCCACGCGCTTAAAAAACGCCCGGCGCGTGCT
GGTTCTAGGTAATGGTGGCATTGCTCTCGAATTTGTACATGAAGTGACGT
CATGTGAGCTTGTATGGGCTGTGAAGGATGCGTATGTTGGGAACACCTTT
TTTGACCATACGGCATCCGGACTTGTGCTGCCAGAGCTTGAGTCCAGGCG
GCCGGTGCACATTGTGGACAATCTTGCGGTTAAAAATCGTGGCGGGGAAG
ACCGTTGTGATGATCCTGAATCATACGGCGACGAAAGAGTTAGGAAGGGT
ATACCATCGAGCAATGGCAGTCAAGCAAAGTGCAGCGAGCGTCAGCCGGT
AGGCAAGAAGCGTCCTTTGCCGGTGGCGCTGGGTCAAGCCCGACACCTTC
CCGCAAACAGGCAGGGTCCTCTCGGTGGATCCTTGGGACCGCATTGGACA
GCAGATCTATCCACTTCTTTGTCCTCCAGTACCGCAGAAAAGAAGGCGGA
TTCAAGTGTCACAAACCCCAAACCGCTCACCATTCTCTTCCACGCTGAGC
TCGAGGAGCTGTACGAGACACCCGAAAATCCCCCCACAAGTTCGGAAACC
AGTGGCGAGCATGAATGGCCGCTATACGTGCGCTTGACGACTGGACATAC
CTGGGGCTGTGACTTTCTGGTCTCCGCTACTGGCGTCGTACCTTCCGTGG
ATTTCCTGGGCCCGGAGTTTGCGCGCGGAGAGGACGGCGGCGTGGTTGTG
AATGACCGCATGCAAACGACTGCAAGCCCCGATGTTTATGCTGCCGGAGA
CTGCTGCTCAATGACATGGCCAACGTCTGAAGTCTGGTTCCAAATGCGGC
TGTGGAGTCAGGCGCGTGCGATGGCTCGTTACGCGGCTCGGTGCATGTCC
GACCAGGTGGATGATCTGGGAGCGGGTTTCGCTTTCGAGTTGTTCGCGCA
CATGACGCGGTTTTTTGGGTTTCCTGTCGCGCTGCTTGGCTGCTTCAATG
CGCAACTCCTACCGGACGCGGAGCAACGACGACTGATCAGGGAGGTAGAG
GTCGCGTTCCCGGGAAAAGCTACGCAACAGGAGGCGGTAGGCGAGGGTCA
GGCATGTTCCCCGAATGTGCAGCTCTCTGCCCAAACCAGGCGCAAAGATG
GATCAAATGCGCTCCAACGCGAAGAGAATGGAACGACCGATAGATTGCAA
GACCATGTCGAAATTCTCACGCGCCTCACCCCGGGGAAGGAATACGTAAA
GGTTGTGGTGGTGGGCGGGCGGGTCAAAGGGGCGATGTGTGTCGGGGAGA
GCACGGAATCGGCAGAGACTTTTGAGAATCTCATCTTAAATGAGCTGGAT
GTCAGCGCATTTGGAGTAGACTTATTGAATCCTGACGTGGACATCGACGA
TTTCTTCGACTAAAGCGACGTATCCGTTTTGACCTCAAGCATCAAAAATA
AATTTTCTCGAGGGACGAGAG back to topprotein sequence of rna872 >rna872-protein ID=rna872-protein|Name=rna872|organism=Nannochloropsis gaditana|type=polypeptide|length=1040bp
MPGLKESLSLLPLAWRMGQYVSGERRENRDPIFDLNGLLLQPPIPGPYAG
VPLGGLGGGCIGRGFRGEFRRWNLNPGKYRHKVVAANQFSVRVLRKGQAP
VAQVLAVGDGRETDGLRAWRWGMDPRVGTYHALFPRAWTVYEEAVPLVRL
TCRQVSPVLPHDYQDSSLPVCVFEWTVENLGASAADVSIMFSFQNGLGTS
SDGAGGHFNRRFSVHRQDSSPRGGEQEAGTTEEAEEGVVVGVHLHHQQEG
ARDKDALTFAVAADAQSGSRVSLCSRFSSGGAGSKEASEVWRQFLEDGSL
REIGRTEEQHGDQDHLETLATRTRGSDRIVETSECALERPSEGRGRGGRV
GEQGDGHTDGRHHRYHHHHHRLHHHAGNGKHRRPQHSKEAGPRRPHHRPS
KAKESIAAAVCQAVSLGPHGVARLSFALAWDMPIVRFGSGLALPRRYTRF
FGKEGGLTAGLIASHALRYYPLWEKEIEAWQRPVLEDPSLPAFYKHMLFN
ELYFLTDGGTVWTESRAGRAHESDGEEEGGQGWETGRNRRPDQEGEVWRG
NREQDARRRAGGASGVENNRTFQSCHGEQRMVGQFLYVEGHEYLMYNTYD
VHFYASFALTMLWPMLELSVQRDVAAAVMGQDLGMRRLLARGEMRPRKVA
GAVPHDLGCPSGVPWGKVNAYNLQDVNRWKDLGPKLVLQAYRDYMATESA
PFARAVWPVLRHVMEAALTAFDRDGDGLIENSGFPDQTYDIWTVKGPSAY
TGGLWVAALTAMAALGEAVTTTNGGSDAQAVVAHYQALATQAREAYAGHL
WNGTYFDYDNSGSPHQDSIMADQMAGQWYARACGLTPVAKGAQARSSLTT
VFKYNVQQFADGCSGAVNGMRPDGQVDDTCMQSQEVWTGTTYSVAAAMLQ
EAALAASEAAEHSEGRGRALQEEADFLRHAAFETARGLYEAGWKRFGYWF
ATPEAWNHEGHFRSLGYMRPLSIWAMQWALTRMPATTVSARPADLVGRTD
DELEQCDKRRDDDTINGAEQHFSHTNGVQTRNNADQVCNK back to topmRNA from alignment at CM002456.1:612515..615765- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna872 ID=rna872|Name=rna872|organism=Nannochloropsis gaditana|type=mRNA|length=3251bp|location=Sequence derived from alignment at CM002456.1:612515..615765- (Nannochloropsis gaditana)
AAACACCCTCATGCTCGCCCTCCGCCCGTACCGCCACCACTTTATTGCTG
GCGGCGGGCGTTCGACGACCTGCCCGATCCTCGGCATTTCAAAGCCGCCA
TGCCTGGCCTCAAGGAGTCACTTAGTCTGCTGCCGTTGGCCTGGCGCATG
GGGCAATACGTAAGCGGCGAGCGACGAGAAAACCGCGACCCTATCTTCGA
CTTGAACGGCCTCCTGCTACAGCCACCAATCCCGGGCCCTTATGCGGGCG
TTCCCTTGGGCGGACTGGGGGGGGGCTGCATCGGCCGTGGCTTCCGTGGC
GAGTTTCGACGATGGAACTTGAATCCAGGAAAATACCGACACAAAGTGGT
GGCTGCCAATCAGTTTTCAGTCCGAGTGCTGCGCAAAGGGCAGGCGCCTG
TGGCTCAAGTCCTGGCCGTCGGCGACGGTCGGGAGACTGACGGCTTGCGG
GCCTGGCGCTGGGGGATGGATCCCCGCGTGGGCACGTACCACGCCTTATT
CCCTCGAGCCTGGACTGTGTACGAGGAGGCGGTTCCCTTGGTCCGCCTGA
CCTGTCGCCAGGTCTCCCCGGTCCTCCCGCACGACTACCAGGACTCCTCT
CTGCCTGTCTGCGTCTTCGAATGGACGGTGGAGAACCTGGGGGCCTCCGC
CGCGGACGTCAGCATCATGTTCAGCTTCCAGAATGGTCTCGGTACATCGA
GCGACGGGGCTGGGGGTCACTTCAACCGGCGTTTCAGCGTGCATCGCCAG
GACAGCTCCCCCCGAGGGGGGGAGCAGGAGGCGGGAACGACCGAGGAGGC
GGAAGAAGGGGTAGTCGTGGGAGTTCATTTGCACCACCAGCAAGAGGGGG
CACGCGACAAAGATGCCCTGACATTCGCCGTGGCGGCGGACGCGCAGTCT
GGGAGCCGGGTCTCCCTCTGCTCACGTTTCTCGAGCGGGGGGGCGGGGAG
CAAGGAGGCCTCCGAGGTCTGGCGGCAGTTTCTGGAGGACGGTAGCCTCA
GGGAAATAGGACGGACAGAGGAACAGCACGGCGACCAGGACCATCTAGAG
ACGTTGGCGACGCGGACGCGTGGAAGTGATCGCATTGTCGAGACCTCGGA
GTGCGCTCTCGAGCGGCCAAGCGAGGGCCGCGGGAGAGGCGGGCGGGTCG
GGGAGCAAGGCGATGGCCATACAGACGGCCGCCATCATCGCTACCACCAC
CACCACCACCGCCTCCACCACCACGCCGGAAACGGCAAGCACAGGCGGCC
CCAACATTCCAAGGAGGCGGGCCCCCGTCGTCCGCACCACCGCCCCTCGA
AAGCCAAGGAATCCATTGCCGCCGCGGTCTGCCAAGCGGTCTCTCTCGGT
CCGCACGGTGTCGCGAGGCTTTCTTTCGCCCTTGCCTGGGACATGCCGAT
TGTTAGGTTTGGGAGCGGTCTGGCCCTACCCCGCCGTTACACACGCTTTT
TCGGGAAGGAGGGAGGGTTGACCGCAGGCCTCATCGCCAGCCACGCCCTA
CGATACTACCCGCTCTGGGAGAAGGAGATCGAAGCCTGGCAGCGTCCTGT
ATTGGAGGATCCTTCGCTGCCAGCCTTTTACAAGCACATGCTCTTCAACG
AACTGTATTTCTTGACGGACGGGGGGACGGTCTGGACCGAAAGTCGGGCG
GGAAGGGCGCATGAGAGCGATGGCGAGGAGGAAGGAGGGCAGGGGTGGGA
GACTGGGAGGAATCGCCGCCCAGACCAAGAAGGTGAAGTCTGGAGAGGAA
ATAGGGAGCAGGATGCCAGAAGAAGAGCAGGTGGGGCGTCCGGTGTGGAG
AACAACCGCACGTTCCAGTCCTGCCACGGGGAGCAGCGCATGGTGGGCCA
GTTCTTATACGTGGAAGGGCACGAATATCTGATGTACAACACCTACGACG
TGCATTTTTACGCCTCGTTTGCCTTGACCATGCTCTGGCCCATGCTGGAA
CTCTCGGTGCAACGAGATGTGGCGGCGGCGGTTATGGGGCAGGACCTAGG
AATGCGTCGACTTCTCGCAAGGGGAGAAATGCGGCCGCGCAAGGTCGCAG
GCGCCGTGCCGCACGACCTTGGCTGCCCCTCTGGGGTGCCTTGGGGAAAG
GTGAACGCTTATAATCTCCAAGATGTGAACAGATGGAAAGATCTGGGCCC
CAAACTTGTCCTTCAAGCGTATCGGGACTACATGGCCACGGAGTCCGCTC
CCTTCGCCCGGGCCGTGTGGCCAGTCTTGCGGCATGTGATGGAGGCGGCC
CTGACGGCCTTCGACCGGGACGGGGACGGCCTGATCGAAAATTCTGGCTT
TCCCGACCAAACGTACGATATCTGGACCGTGAAGGGTCCGAGTGCCTACA
CTGGCGGTTTGTGGGTGGCAGCACTGACCGCAATGGCGGCTTTGGGAGAA
GCCGTGACCACGACGAACGGCGGGTCAGATGCTCAGGCTGTCGTGGCGCA
TTACCAGGCCTTGGCCACACAGGCCCGAGAAGCCTACGCTGGTCACCTCT
GGAACGGCACTTATTTCGACTACGACAACAGTGGGAGCCCGCACCAGGAC
TCGATCATGGCCGACCAAATGGCGGGGCAATGGTATGCACGGGCATGTGG
TCTGACGCCAGTGGCGAAAGGGGCCCAGGCCCGGTCAAGCCTGACCACAG
TCTTCAAATATAATGTCCAGCAGTTCGCGGATGGGTGTTCGGGGGCGGTC
AATGGCATGCGCCCGGACGGGCAGGTGGACGACACATGTATGCAGTCCCA
GGAGGTGTGGACCGGCACGACCTACTCCGTCGCGGCCGCTATGCTTCAAG
AAGCCGCGCTGGCGGCGTCGGAGGCAGCAGAACATTCTGAGGGGCGGGGG
CGGGCCTTACAGGAAGAGGCAGACTTCCTGCGTCACGCGGCCTTTGAGAC
GGCGCGTGGCTTGTACGAAGCAGGATGGAAGAGGTTCGGATATTGGTTTG
CCACACCTGAGGCCTGGAATCATGAAGGTCACTTTCGTTCGTTAGGGTAC
ATGCGCCCCCTAAGCATATGGGCCATGCAATGGGCTCTTACGCGCATGCC
TGCAACCACCGTGTCGGCAAGACCAGCTGACTTGGTAGGGAGGACTGATG
ATGAGCTCGAACAGTGTGATAAACGGCGAGACGATGACACAATAAATGGA
GCCGAGCAGCATTTTTCACATACAAATGGCGTCCAGACGCGAAATAATGC
AGATCAGGTTTGCAATAAATAATCCAATTAAAGTACAATTATGAGTAGAG
G back to topCoding sequence (CDS) from alignment at CM002456.1:612515..615765- >rna872 ID=rna872|Name=rna872|organism=Nannochloropsis gaditana|type=CDS|length=3123bp|location=Sequence derived from alignment at CM002456.1:612515..615765- (Nannochloropsis gaditana)
ATGCCTGGCCTCAAGGAGTCACTTAGTCTGCTGCCGTTGGCCTGGCGCAT
GGGGCAATACGTAAGCGGCGAGCGACGAGAAAACCGCGACCCTATCTTCG
ACTTGAACGGCCTCCTGCTACAGCCACCAATCCCGGGCCCTTATGCGGGC
GTTCCCTTGGGCGGACTGGGGGGGGGCTGCATCGGCCGTGGCTTCCGTGG
CGAGTTTCGACGATGGAACTTGAATCCAGGAAAATACCGACACAAAGTGG
TGGCTGCCAATCAGTTTTCAGTCCGAGTGCTGCGCAAAGGGCAGGCGCCT
GTGGCTCAAGTCCTGGCCGTCGGCGACGGTCGGGAGACTGACGGCTTGCG
GGCCTGGCGCTGGGGGATGGATCCCCGCGTGGGCACGTACCACGCCTTAT
TCCCTCGAGCCTGGACTGTGTACGAGGAGGCGGTTCCCTTGGTCCGCCTG
ACCTGTCGCCAGGTCTCCCCGGTCCTCCCGCACGACTACCAGGACTCCTC
TCTGCCTGTCTGCGTCTTCGAATGGACGGTGGAGAACCTGGGGGCCTCCG
CCGCGGACGTCAGCATCATGTTCAGCTTCCAGAATGGTCTCGGTACATCG
AGCGACGGGGCTGGGGGTCACTTCAACCGGCGTTTCAGCGTGCATCGCCA
GGACAGCTCCCCCCGAGGGGGGGAGCAGGAGGCGGGAACGACCGAGGAGG
CGGAAGAAGGGGTAGTCGTGGGAGTTCATTTGCACCACCAGCAAGAGGGG
GCACGCGACAAAGATGCCCTGACATTCGCCGTGGCGGCGGACGCGCAGTC
TGGGAGCCGGGTCTCCCTCTGCTCACGTTTCTCGAGCGGGGGGGCGGGGA
GCAAGGAGGCCTCCGAGGTCTGGCGGCAGTTTCTGGAGGACGGTAGCCTC
AGGGAAATAGGACGGACAGAGGAACAGCACGGCGACCAGGACCATCTAGA
GACGTTGGCGACGCGGACGCGTGGAAGTGATCGCATTGTCGAGACCTCGG
AGTGCGCTCTCGAGCGGCCAAGCGAGGGCCGCGGGAGAGGCGGGCGGGTC
GGGGAGCAAGGCGATGGCCATACAGACGGCCGCCATCATCGCTACCACCA
CCACCACCACCGCCTCCACCACCACGCCGGAAACGGCAAGCACAGGCGGC
CCCAACATTCCAAGGAGGCGGGCCCCCGTCGTCCGCACCACCGCCCCTCG
AAAGCCAAGGAATCCATTGCCGCCGCGGTCTGCCAAGCGGTCTCTCTCGG
TCCGCACGGTGTCGCGAGGCTTTCTTTCGCCCTTGCCTGGGACATGCCGA
TTGTTAGGTTTGGGAGCGGTCTGGCCCTACCCCGCCGTTACACACGCTTT
TTCGGGAAGGAGGGAGGGTTGACCGCAGGCCTCATCGCCAGCCACGCCCT
ACGATACTACCCGCTCTGGGAGAAGGAGATCGAAGCCTGGCAGCGTCCTG
TATTGGAGGATCCTTCGCTGCCAGCCTTTTACAAGCACATGCTCTTCAAC
GAACTGTATTTCTTGACGGACGGGGGGACGGTCTGGACCGAAAGTCGGGC
GGGAAGGGCGCATGAGAGCGATGGCGAGGAGGAAGGAGGGCAGGGGTGGG
AGACTGGGAGGAATCGCCGCCCAGACCAAGAAGGTGAAGTCTGGAGAGGA
AATAGGGAGCAGGATGCCAGAAGAAGAGCAGGTGGGGCGTCCGGTGTGGA
GAACAACCGCACGTTCCAGTCCTGCCACGGGGAGCAGCGCATGGTGGGCC
AGTTCTTATACGTGGAAGGGCACGAATATCTGATGTACAACACCTACGAC
GTGCATTTTTACGCCTCGTTTGCCTTGACCATGCTCTGGCCCATGCTGGA
ACTCTCGGTGCAACGAGATGTGGCGGCGGCGGTTATGGGGCAGGACCTAG
GAATGCGTCGACTTCTCGCAAGGGGAGAAATGCGGCCGCGCAAGGTCGCA
GGCGCCGTGCCGCACGACCTTGGCTGCCCCTCTGGGGTGCCTTGGGGAAA
GGTGAACGCTTATAATCTCCAAGATGTGAACAGATGGAAAGATCTGGGCC
CCAAACTTGTCCTTCAAGCGTATCGGGACTACATGGCCACGGAGTCCGCT
CCCTTCGCCCGGGCCGTGTGGCCAGTCTTGCGGCATGTGATGGAGGCGGC
CCTGACGGCCTTCGACCGGGACGGGGACGGCCTGATCGAAAATTCTGGCT
TTCCCGACCAAACGTACGATATCTGGACCGTGAAGGGTCCGAGTGCCTAC
ACTGGCGGTTTGTGGGTGGCAGCACTGACCGCAATGGCGGCTTTGGGAGA
AGCCGTGACCACGACGAACGGCGGGTCAGATGCTCAGGCTGTCGTGGCGC
ATTACCAGGCCTTGGCCACACAGGCCCGAGAAGCCTACGCTGGTCACCTC
TGGAACGGCACTTATTTCGACTACGACAACAGTGGGAGCCCGCACCAGGA
CTCGATCATGGCCGACCAAATGGCGGGGCAATGGTATGCACGGGCATGTG
GTCTGACGCCAGTGGCGAAAGGGGCCCAGGCCCGGTCAAGCCTGACCACA
GTCTTCAAATATAATGTCCAGCAGTTCGCGGATGGGTGTTCGGGGGCGGT
CAATGGCATGCGCCCGGACGGGCAGGTGGACGACACATGTATGCAGTCCC
AGGAGGTGTGGACCGGCACGACCTACTCCGTCGCGGCCGCTATGCTTCAA
GAAGCCGCGCTGGCGGCGTCGGAGGCAGCAGAACATTCTGAGGGGCGGGG
GCGGGCCTTACAGGAAGAGGCAGACTTCCTGCGTCACGCGGCCTTTGAGA
CGGCGCGTGGCTTGTACGAAGCAGGATGGAAGAGGTTCGGATATTGGTTT
GCCACACCTGAGGCCTGGAATCATGAAGGTCACTTTCGTTCGTTAGGGTA
CATGCGCCCCCTAAGCATATGGGCCATGCAATGGGCTCTTACGCGCATGC
CTGCAACCACCGTGTCGGCAAGACCAGCTGACTTGGTAGGGAGGACTGAT
GATGAGCTCGAACAGTGTGATAAACGGCGAGACGATGACACAATAAATGG
AGCCGAGCAGCATTTTTCACATACAAATGGCGTCCAGACGCGAAATAATG
CAGATCAGGTTTGCAATAAATAA back to top
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